RNA–Protein interactions for RNA: ENST00000485412.1

SQSTM1-208, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 656 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-208ENST00000485412 SLC37A4O43826 429 aa15.57■□□□□ 0.08
SQSTM1-208ENST00000485412 USP11P51784 963 aa15.57■□□□□ 0.08
SQSTM1-208ENST00000485412 CLCN5P51795 746 aa15.57■□□□□ 0.08
SQSTM1-208ENST00000485412 JAK3P52333 1124 aa15.57■□□□□ 0.08
SQSTM1-208ENST00000485412 BCAR1P56945 870 aa15.57■□□□□ 0.08
SQSTM1-208ENST00000485412 PLA2G4FQ68DD2 849 aa15.57■□□□□ 0.08
SQSTM1-208ENST00000485412 FRMD5Q7Z6J6 570 aa15.57■□□□□ 0.08
SQSTM1-208ENST00000485412 ZNF710Q8N1W2 664 aa15.57■□□□□ 0.08
SQSTM1-208ENST00000485412 ZNF579Q8NAF0 562 aaKnown RBP15.57■□□□□ 0.08
SQSTM1-208ENST00000485412 FLCNQ8NFG4 579 aa15.57■□□□□ 0.08
SQSTM1-208ENST00000485412 ETNPPLQ8TBG4 499 aa15.57■□□□□ 0.08
SQSTM1-208ENST00000485412 FDXACB1Q9BRP7 624 aaPredicted RBP15.57■□□□□ 0.08
SQSTM1-208ENST00000485412 DACT1Q9NYF0 836 aa15.57■□□□□ 0.08
SQSTM1-208ENST00000485412 PCDHA4Q9UN74 947 aa15.57■□□□□ 0.08
SQSTM1-208ENST00000485412 VPS13AQ96RL7 3174 aa15.57■□□□□ 0.08
SQSTM1-208ENST00000485412 IGKV6-21A0A0C4DH24 114 aa15.56■□□□□ 0.08
SQSTM1-208ENST00000485412 SPDYE4A6NLX3 237 aa15.56■□□□□ 0.08
SQSTM1-208ENST00000485412 EML1O00423 815 aa15.56■□□□□ 0.08
SQSTM1-208ENST00000485412 EOMESO95936 686 aa15.56■□□□□ 0.08
SQSTM1-208ENST00000485412 SFNP31947 248 aa15.56■□□□□ 0.08
SQSTM1-208ENST00000485412 Q4G0T1 1027 aa15.56■□□□□ 0.08
SQSTM1-208ENST00000485412 ANO5Q75V66 913 aa15.56■□□□□ 0.08
SQSTM1-208ENST00000485412 VPS52Q8N1B4 723 aa15.56■□□□□ 0.08
SQSTM1-208ENST00000485412 MBOAT7Q96N66 472 aa15.56■□□□□ 0.08
SQSTM1-208ENST00000485412 VN1R3Q9BXE9 311 aa15.56■□□□□ 0.08
SQSTM1-208ENST00000485412 NIFKQ9BYG3 293 aaKnown RBP15.56■□□□□ 0.08
SQSTM1-208ENST00000485412 SH3GLB2Q9NR46 395 aa15.56■□□□□ 0.08
SQSTM1-208ENST00000485412 GJB4Q9NTQ9 266 aa15.56■□□□□ 0.08
SQSTM1-208ENST00000485412 WRAP73Q9P2S5 460 aaPredicted RBP15.56■□□□□ 0.08
SQSTM1-208ENST00000485412 USTQ9Y2C2 406 aa15.56■□□□□ 0.08
SQSTM1-208ENST00000485412 CYP3A7-CYP3A51PA0A087WV96 503 aa15.55■□□□□ 0.08
SQSTM1-208ENST00000485412 ZC3H11AO75152 810 aaKnown RBP eCLIP15.55■□□□□ 0.08
SQSTM1-208ENST00000485412 EPCAMP16422 314 aa15.55■□□□□ 0.08
SQSTM1-208ENST00000485412 CYP3A7P24462 503 aa15.55■□□□□ 0.08
SQSTM1-208ENST00000485412 PHKA2P46019 1235 aa15.55■□□□□ 0.08
SQSTM1-208ENST00000485412 AFF1P51825 1210 aaKnown RBP15.55■□□□□ 0.08
SQSTM1-208ENST00000485412 NPEPPSP55786 919 aa15.55■□□□□ 0.08
SQSTM1-208ENST00000485412 STK3Q13188 491 aa15.55■□□□□ 0.08
SQSTM1-208ENST00000485412 GIT2Q14161 759 aa15.55■□□□□ 0.08
SQSTM1-208ENST00000485412 XKR3Q5GH77 459 aa15.55■□□□□ 0.08
SQSTM1-208ENST00000485412 RUFY3Q7L099 469 aa15.55■□□□□ 0.08
SQSTM1-208ENST00000485412 CABP7Q86V35 215 aa15.55■□□□□ 0.08
SQSTM1-208ENST00000485412 BLIDQ8IZY5 108 aa15.55■□□□□ 0.08
SQSTM1-208ENST00000485412 ADSSL1Q8N142 457 aa15.55■□□□□ 0.08
SQSTM1-208ENST00000485412 ACSF2Q96CM8 615 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-208ENST00000485412 ZBP1Q9H171 429 aa15.55■□□□□ 0.08
SQSTM1-208ENST00000485412 CYP26B1Q9NR63 512 aa15.55■□□□□ 0.08
SQSTM1-208ENST00000485412 DNAJB4Q9UDY4 337 aa15.55■□□□□ 0.08
SQSTM1-208ENST00000485412 KCNJ14Q9UNX9 436 aa15.55■□□□□ 0.08
SQSTM1-208ENST00000485412 CARNS1A5YM72 827 aa15.54■□□□□ 0.08
SQSTM1-208ENST00000485412 DDX11L8A8MPP1 907 aa15.54■□□□□ 0.08
SQSTM1-208ENST00000485412 ID4P47928 161 aa15.54■□□□□ 0.08
SQSTM1-208ENST00000485412 SSRP1Q08945 709 aaKnown RBP15.54■□□□□ 0.08
SQSTM1-208ENST00000485412 INF2Q27J81 1249 aa15.54■□□□□ 0.08
SQSTM1-208ENST00000485412 TMC5Q6UXY8 1006 aa15.54■□□□□ 0.08
SQSTM1-208ENST00000485412 ERMP1Q7Z2K6 904 aa15.54■□□□□ 0.08
SQSTM1-208ENST00000485412 RHPN2Q8IUC4 686 aa15.54■□□□□ 0.08
SQSTM1-208ENST00000485412 NLRP4Q96MN2 994 aa15.54■□□□□ 0.08
SQSTM1-208ENST00000485412 GCOM2Q9BZD3 368 aaPredicted RBP15.54■□□□□ 0.08
SQSTM1-208ENST00000485412 NRDE2Q9H7Z3 1164 aa15.54■□□□□ 0.08
SQSTM1-208ENST00000485412 ZSWIM6Q9HCJ5 1215 aa15.54■□□□□ 0.08
SQSTM1-208ENST00000485412 BMP2KQ9NSY1 1161 aaPredicted RBP15.54■□□□□ 0.08
SQSTM1-208ENST00000485412 TBC1D13Q9NVG8 400 aa15.54■□□□□ 0.08
SQSTM1-208ENST00000485412 SUCLA2Q9P2R7 463 aaPredicted RBP15.54■□□□□ 0.08
SQSTM1-208ENST00000485412 FBXL21Q9UKT6 434 aa15.54■□□□□ 0.08
SQSTM1-208ENST00000485412 VAV3Q9UKW4 847 aa15.54■□□□□ 0.08
SQSTM1-208ENST00000485412 PIN4Q9Y237 131 aaKnown RBP15.54■□□□□ 0.08
SQSTM1-208ENST00000485412 INPP5FQ9Y2H2 1132 aa15.54■□□□□ 0.08
SQSTM1-208ENST00000485412 MAFO75444 373 aaPredicted RBP15.53■□□□□ 0.08
SQSTM1-208ENST00000485412 CTSAP10619 480 aa15.53■□□□□ 0.08
SQSTM1-208ENST00000485412 PSMA5P28066 241 aa15.53■□□□□ 0.08
SQSTM1-208ENST00000485412 POLGP54098 1239 aaPredicted RBP15.53■□□□□ 0.08
SQSTM1-208ENST00000485412 CWF19L1Q69YN2 538 aaKnown RBP15.53■□□□□ 0.08
SQSTM1-208ENST00000485412 TWF2Q6IBS0 349 aaKnown RBP15.53■□□□□ 0.08
SQSTM1-208ENST00000485412 CCDC149Q6ZUS6 474 aa15.53■□□□□ 0.08
SQSTM1-208ENST00000485412 DDX53Q86TM3 631 aaKnown RBP15.53■□□□□ 0.08
SQSTM1-208ENST00000485412 ZNF280BQ86YH2 543 aa15.53■□□□□ 0.08
SQSTM1-208ENST00000485412 DAGLBQ8NCG7 672 aa15.53■□□□□ 0.08
SQSTM1-208ENST00000485412 RDM1Q8NG50 284 aa15.53■□□□□ 0.08
SQSTM1-208ENST00000485412 MINDY3Q9H8M7 445 aa15.53■□□□□ 0.08
SQSTM1-208ENST00000485412 SFXN1Q9H9B4 322 aa15.53■□□□□ 0.08
SQSTM1-208ENST00000485412 IFT122Q9HBG6 1241 aa15.53■□□□□ 0.08
SQSTM1-208ENST00000485412 FAM105AQ9NUU6 356 aa15.53■□□□□ 0.08
SQSTM1-208ENST00000485412 DDX25Q9UHL0 483 aaKnown RBP15.53■□□□□ 0.08
SQSTM1-208ENST00000485412 TDRD15B5MCY1 1934 aaKnown RBP15.53■□□□□ 0.08
SQSTM1-208ENST00000485412 FAM205CA6NFA0 338 aa15.52■□□□□ 0.08
SQSTM1-208ENST00000485412 OFD1O75665 1012 aa15.52■□□□□ 0.08
SQSTM1-208ENST00000485412 DEXIO95424 95 aa15.52■□□□□ 0.08
SQSTM1-208ENST00000485412 AOC1P19801 751 aa15.52■□□□□ 0.08
SQSTM1-208ENST00000485412 SLC11A1P49279 550 aa15.52■□□□□ 0.08
SQSTM1-208ENST00000485412 RNASELQ05823 741 aaKnown RBP15.52■□□□□ 0.08
SQSTM1-208ENST00000485412 TDGQ13569 410 aa15.52■□□□□ 0.08
SQSTM1-208ENST00000485412 OTOP3Q7RTS5 596 aa15.52■□□□□ 0.08
SQSTM1-208ENST00000485412 PPFIBP1Q86W92 1011 aa15.52■□□□□ 0.08
SQSTM1-208ENST00000485412 TRIM22Q8IYM9 498 aa15.52■□□□□ 0.08
SQSTM1-208ENST00000485412 OXER1Q8TDS5 423 aa15.52■□□□□ 0.08
SQSTM1-208ENST00000485412 SLC22A17Q8WUG5 538 aa15.52■□□□□ 0.08
SQSTM1-208ENST00000485412 RSPH1Q8WYR4 309 aa15.52■□□□□ 0.08
SQSTM1-208ENST00000485412 IGSF21Q96ID5 467 aa15.52■□□□□ 0.08
SQSTM1-208ENST00000485412 GBP3Q9H0R5 595 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms