RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	TMEM145	Q8NBT3	493 aa		5.24	□□□□□ -1.57
VPS8-223	ENST00000485024	SLC7A14	Q8TBB6	771 aa		5.24	□□□□□ -1.57
VPS8-223	ENST00000485024	LEO1	Q8WVC0	666 aa	Predicted RBP	5.24	□□□□□ -1.57
VPS8-223	ENST00000485024	GPR87	Q9BY21	358 aa		5.24	□□□□□ -1.57
VPS8-223	ENST00000485024	SLC52A2	Q9HAB3	445 aa		5.24	□□□□□ -1.57
VPS8-223	ENST00000485024	GPR27	Q9NS67	375 aa		5.24	□□□□□ -1.57
VPS8-223	ENST00000485024	KLHL42	Q9P2K6	505 aa		5.24	□□□□□ -1.57
VPS8-223	ENST00000485024	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	5.23	□□□□□ -1.57
VPS8-223	ENST00000485024	KLRG2	A4D1S0	409 aa	Predicted RBP	5.23	□□□□□ -1.57
VPS8-223	ENST00000485024	ZEB2	O60315	1214 aa		5.23	□□□□□ -1.57
VPS8-223	ENST00000485024	MSC	O60682	206 aa		5.23	□□□□□ -1.57
VPS8-223	ENST00000485024	DNAJC8	O75937	253 aa	Predicted RBP	5.23	□□□□□ -1.57
VPS8-223	ENST00000485024	SDS	P20132	328 aa		5.23	□□□□□ -1.57
VPS8-223	ENST00000485024	SCNN1B	P51168	640 aa		5.23	□□□□□ -1.57
VPS8-223	ENST00000485024	RNF219	Q5W0B1	726 aa	Predicted RBP	5.23	□□□□□ -1.57
VPS8-223	ENST00000485024	MTDH	Q86UE4	582 aa	Known RBP	5.23	□□□□□ -1.57
VPS8-223	ENST00000485024	IFNL3	Q8IZI9	196 aa		5.23	□□□□□ -1.57
VPS8-223	ENST00000485024	ZNF366	Q8N895	744 aa		5.23	□□□□□ -1.57
VPS8-223	ENST00000485024	OR2W6P	Q8NHA6	318 aa		5.23	□□□□□ -1.57
VPS8-223	ENST00000485024	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	5.23	□□□□□ -1.57
VPS8-223	ENST00000485024	USP7	Q93009	1102 aa		5.23	□□□□□ -1.57
VPS8-223	ENST00000485024	ALG1	Q9BT22	464 aa		5.23	□□□□□ -1.57
VPS8-223	ENST00000485024	FBXO10	Q9UK96	956 aa		5.23	□□□□□ -1.57
VPS8-223	ENST00000485024	TNPO3	Q9Y5L0	923 aa	Known RBP	5.23	□□□□□ -1.57
VPS8-223	ENST00000485024	WDR62	O43379	1518 aa		5.23	□□□□□ -1.57
VPS8-223	ENST00000485024	TCRBV16S1A1N1	A0A5B0	115 aa		5.22	□□□□□ -1.57
VPS8-223	ENST00000485024	GPR85	P60893	370 aa		5.22	□□□□□ -1.57
VPS8-223	ENST00000485024	OCRL	Q01968	901 aa		5.22	□□□□□ -1.57
VPS8-223	ENST00000485024	GUCY1A3	Q02108	690 aa		5.22	□□□□□ -1.57
VPS8-223	ENST00000485024	FAP	Q12884	760 aa		5.22	□□□□□ -1.57
VPS8-223	ENST00000485024	HABP4	Q5JVS0	413 aa	Known RBP	5.22	□□□□□ -1.57
VPS8-223	ENST00000485024	KCTD1	Q719H9	257 aa		5.22	□□□□□ -1.57
VPS8-223	ENST00000485024	GRASP	Q7Z6J2	395 aa	Predicted RBP	5.22	□□□□□ -1.57
VPS8-223	ENST00000485024	STAG1	Q8WVM7	1258 aa		5.22	□□□□□ -1.57
VPS8-223	ENST00000485024	WNK4	Q96J92	1243 aa		5.22	□□□□□ -1.57
VPS8-223	ENST00000485024	TTC1	Q99614	292 aa		5.22	□□□□□ -1.57
VPS8-223	ENST00000485024	ORAI3	Q9BRQ5	295 aa		5.22	□□□□□ -1.57
VPS8-223	ENST00000485024	RSAD1	Q9HA92	442 aa		5.22	□□□□□ -1.57
VPS8-223	ENST00000485024	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	5.22	□□□□□ -1.57
VPS8-223	ENST00000485024	GEMIN8	Q9NWZ8	242 aa	Known RBP	5.22	□□□□□ -1.57
VPS8-223	ENST00000485024	POLR2A	P24928	1970 aa	Known RBP	5.22	□□□□□ -1.57
VPS8-223	ENST00000485024	SETD1B	Q9UPS6	1966 aa	Known RBP	5.22	□□□□□ -1.57
VPS8-223	ENST00000485024	MED1	Q15648	1581 aa	Predicted RBP	5.21	□□□□□ -1.57
VPS8-223	ENST00000485024	COL11A2	P13942	1736 aa	Predicted RBP	5.21	□□□□□ -1.58
VPS8-223	ENST00000485024	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	5.21	□□□□□ -1.58
VPS8-223	ENST00000485024		A0A1W2PRX2	142 aa		5.21	□□□□□ -1.58
VPS8-223	ENST00000485024	GRXCR1	A8MXD5	290 aa		5.21	□□□□□ -1.58
VPS8-223	ENST00000485024	CRTAM	O95727	393 aa		5.21	□□□□□ -1.58
VPS8-223	ENST00000485024	JMJD7	P0C870	316 aa		5.21	□□□□□ -1.58
VPS8-223	ENST00000485024	PTH2R	P49190	550 aa		5.21	□□□□□ -1.58
VPS8-223	ENST00000485024	MEOX1	P50221	254 aa		5.21	□□□□□ -1.58
VPS8-223	ENST00000485024	RABGGTB	P53611	331 aa		5.21	□□□□□ -1.58
VPS8-223	ENST00000485024	EPHB1	P54762	984 aa		5.21	□□□□□ -1.58
VPS8-223	ENST00000485024	FOXF2	Q12947	444 aa		5.21	□□□□□ -1.58
VPS8-223	ENST00000485024	KIZ	Q2M2Z5	673 aa		5.21	□□□□□ -1.58
VPS8-223	ENST00000485024	ZCCHC8	Q6NZY4	707 aa	Known RBP	5.21	□□□□□ -1.58
VPS8-223	ENST00000485024		Q6YL49	198 aa		5.21	□□□□□ -1.58
VPS8-223	ENST00000485024	RTKN2	Q8IZC4	609 aa		5.21	□□□□□ -1.58
VPS8-223	ENST00000485024	UBR7	Q8N806	425 aa		5.21	□□□□□ -1.58
VPS8-223	ENST00000485024		Q8N9P0	234 aa	Predicted RBP	5.21	□□□□□ -1.58
VPS8-223	ENST00000485024	WDR66	Q8TBY9	1149 aa		5.21	□□□□□ -1.58
VPS8-223	ENST00000485024	JDP2	Q8WYK2	163 aa		5.21	□□□□□ -1.58
VPS8-223	ENST00000485024	IFT22	Q9H7X7	185 aa		5.21	□□□□□ -1.58
VPS8-223	ENST00000485024	CABP5	Q9NP86	173 aa		5.21	□□□□□ -1.58
VPS8-223	ENST00000485024	CHPF2	Q9P2E5	772 aa		5.21	□□□□□ -1.58
VPS8-223	ENST00000485024	APOBEC2	Q9Y235	224 aa	Known RBP	5.21	□□□□□ -1.58
VPS8-223	ENST00000485024	ZKSCAN5	Q9Y2L8	839 aa		5.21	□□□□□ -1.58
VPS8-223	ENST00000485024	TOP2B	Q02880	1626 aa		5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	PARN	O95453	639 aa	Known RBP	5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	ZFP36	P26651	326 aa	Known RBP	5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	CDKN1C	P49918	316 aa	Predicted RBP	5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	GUCY2F	P51841	1108 aa		5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	STRN3	Q13033	797 aa		5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	PAK1	Q13153	545 aa		5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	STIL	Q15468	1287 aa		5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	NTRK3	Q16288	839 aa		5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	BRDT	Q58F21	947 aa	Predicted RBP	5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	FAM47C	Q5HY64	1035 aa		5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	CDCA2	Q69YH5	1023 aa	Predicted RBP	5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	CXXC5	Q7LFL8	322 aa	Known RBP	5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	SPATS2	Q86XZ4	545 aa	Known RBP	5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	ZC3H7A	Q8IWR0	971 aa	Known RBP	5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	FAM98A	Q8NCA5	519 aa	Known RBP	5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	SMG7	Q92540	1137 aa	Known RBP	5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	PHF20	Q9BVI0	1012 aa		5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	PUS7L	Q9H0K6	701 aa	Known RBP	5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	DSE	Q9UL01	958 aa		5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	FAM184B	Q9ULE4	1060 aa		5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	SPEF1	Q9Y4P9	236 aa		5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	LAMC3	Q9Y6N6	1575 aa		5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	NCAPD3	P42695	1498 aa		5.2	□□□□□ -1.58
VPS8-223	ENST00000485024	KPNA6	O60684	536 aa		5.19	□□□□□ -1.58
VPS8-223	ENST00000485024	GAS7	O60861	476 aa		5.19	□□□□□ -1.58
VPS8-223	ENST00000485024	EYA4	O95677	639 aa		5.19	□□□□□ -1.58
VPS8-223	ENST00000485024	TYRP1	P17643	537 aa		5.19	□□□□□ -1.58
VPS8-223	ENST00000485024	PRR16	Q569H4	304 aa		5.19	□□□□□ -1.58
VPS8-223	ENST00000485024	C1QL3	Q5VWW1	255 aa		5.19	□□□□□ -1.58
VPS8-223	ENST00000485024	OTOP2	Q7RTS6	562 aa		5.19	□□□□□ -1.58
VPS8-223	ENST00000485024	FGD2	Q7Z6J4	655 aa		5.19	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms