RNA–Protein interactions for RNA: ENST00000484594.5

ERBB4-209, Transcript of erb-b2 receptor tyrosine kinase 4, human

TSL 1 (best)

Gene ERBB4, Length 2,680 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB4-209	ENST00000484594	SCN10A	Q9Y5Y9	1956 aa		11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	RALGAPA2	Q2PPJ7	1873 aa		11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	ZBTB42	B2RXF5	422 aa		11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	HAS3	O00219	553 aa		11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	MSC	O60682	206 aa		11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	TMOD1	P28289	359 aa		11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	GJA9	P57773	515 aa		11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	NOC4L	Q9BVI4	516 aa	Known RBP	11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	YY1AP1	Q9H869	796 aa		11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	USP20	Q9Y2K6	914 aa		11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	NRCAM	Q92823	1304 aa		11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	UTRN	P46939	3433 aa		11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	PRPF6	O94906	941 aa	Known RBP	11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	LDHA	P00338	332 aa	Known RBP	11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	CAPN2	P17655	700 aa		11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	RFX1	P22670	979 aa		11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	NMT1	P30419	496 aa	Known RBP	11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	PEX3	P56589	373 aa		11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	KYAT1	Q16773	422 aa		11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	MIIP	Q5JXC2	388 aa		11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	INTS8	Q75QN2	995 aa	Known RBP	11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	ZNF410	Q86VK4	478 aa		11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	HPS3	Q969F9	1004 aa		11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	FBXL18	Q96ME1	805 aa		11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	NDST4	Q9H3R1	872 aa		11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	BCAS3	Q9H6U6	928 aa		11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	ARMCX3	Q9UH62	379 aa	Predicted RBP	11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594	MYO6	Q9UM54	1294 aa		11.93	□□□□□ -0.5
ERBB4-209	ENST00000484594		H3BRB1	525 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	ADCY3	O60266	1144 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	HOXC8	P31273	242 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	GTF2H1	P32780	548 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	CACNB1	Q02641	598 aa	Predicted RBP	11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	STRN3	Q13033	797 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	LRRC41	Q15345	812 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	CCDC40	Q4G0X9	1142 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	TLK2	Q86UE8	772 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	ZBTB8OS	Q8IWT0	167 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	SYCP3	Q8IZU3	236 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	MYRIP	Q8NFW9	859 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	AFG1L	Q8WV93	481 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	BORCS6	Q96GS4	357 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	PRIMPOL	Q96LW4	560 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	FGFBP2	Q9BYJ0	223 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	TUT1	Q9H6E5	874 aa	Known RBP	11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	SPC25	Q9HBM1	224 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	SRRD	Q9UH36	339 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	SEPT4	O43236	478 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	CCP110	O43303	1012 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	C22orf31	O95567	290 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	GNAT1	P11488	350 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	RAD51AP2	Q09MP3	1159 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	GRM1	Q13255	1194 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	ZNF771	Q7L3S4	317 aa	Predicted RBP	11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	TMC6	Q7Z403	805 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	LRRC8A	Q8IWT6	810 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	RNF186	Q9NXI6	227 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	FLRT1	Q9NZU1	646 aa		11.92	□□□□□ -0.5
ERBB4-209	ENST00000484594	GLRA2	P23416	452 aa		11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	MAP3K21	Q5TCX8	1036 aa		11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	SESTD1	Q86VW0	696 aa		11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	PPFIBP1	Q86W92	1011 aa		11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	XXYLT1	Q8NBI6	393 aa		11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	GLIS3	Q8NEA6	775 aa		11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	DEPTOR	Q8TB45	409 aa		11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	TMC2	Q8TDI7	906 aa		11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	PLCB1	Q9NQ66	1216 aa		11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	TRPC6	Q9Y210	931 aa		11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	DENND3	A2RUS2	1198 aa		11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	MBLAC1	A4D2B0	266 aa	Predicted RBP	11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	HMGCR	P04035	888 aa		11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	CDK17	Q00537	523 aa		11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	SP4	Q02446	784 aa		11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	UBXN1	Q04323	297 aa		11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	PTPN11	Q06124	597 aa	Predicted RBP	11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	NELFCD	Q8IXH7	590 aa		11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	FAM81B	Q96LP2	452 aa		11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	CCDC113	Q9H0I3	377 aa		11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	TMX1	Q9H3N1	280 aa		11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	GEMIN8	Q9NWZ8	242 aa	Known RBP	11.91	□□□□□ -0.5
ERBB4-209	ENST00000484594	SMIM35	A0A1B0GVV1	85 aa		11.9	□□□□□ -0.5
ERBB4-209	ENST00000484594	TULP1	O00294	542 aa	Predicted RBP	11.9	□□□□□ -0.5
ERBB4-209	ENST00000484594	CABYR	O75952	493 aa		11.9	□□□□□ -0.5
ERBB4-209	ENST00000484594	CYP2B6	P20813	491 aa		11.9	□□□□□ -0.5
ERBB4-209	ENST00000484594	CCDC186	Q7Z3E2	898 aa		11.9	□□□□□ -0.5
ERBB4-209	ENST00000484594	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	11.9	□□□□□ -0.5
ERBB4-209	ENST00000484594	NME8	Q8N427	588 aa		11.9	□□□□□ -0.5
ERBB4-209	ENST00000484594	SLAIN1	Q8ND83	568 aa		11.9	□□□□□ -0.5
ERBB4-209	ENST00000484594	SYN2	Q92777	582 aa	Predicted RBP	11.9	□□□□□ -0.5
ERBB4-209	ENST00000484594	COPS5	Q92905	334 aa		11.9	□□□□□ -0.5
ERBB4-209	ENST00000484594	TAB2	Q9NYJ8	693 aa		11.9	□□□□□ -0.5
ERBB4-209	ENST00000484594	CAPN11	Q9UMQ6	739 aa		11.9	□□□□□ -0.5
ERBB4-209	ENST00000484594	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	11.9	□□□□□ -0.5
ERBB4-209	ENST00000484594	AKR1B15	C9JRZ8	316 aa	Predicted RBP	11.9	□□□□□ -0.5
ERBB4-209	ENST00000484594	AFP	P02771	609 aa	Known RBP	11.9	□□□□□ -0.5
ERBB4-209	ENST00000484594	TUBB4A	P04350	444 aa		11.9	□□□□□ -0.5
ERBB4-209	ENST00000484594	PHKA2	P46019	1235 aa		11.9	□□□□□ -0.5
ERBB4-209	ENST00000484594	SRGAP1	Q7Z6B7	1085 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms