RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 STK17AQ9UEE5 414 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 PCDHA12Q9UN75 941 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 COL4A6Q14031 1691 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 IGSF9BQ9UPX0 1349 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 A0A0C4DFX4 3053 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 CYP3A7-CYP3A51PA0A087WV96 503 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 IGKV6D-21A0A0A0MT36 114 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 GRXCR2A6NFK2 248 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 PP2D1A8MPX8 630 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 RSPH10B2B2RC85 870 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 ZBTB42B2RXF5 422 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 RFXAPO00287 272 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 EML1O00423 815 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 TBX3O15119 743 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 MAFGO15525 162 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 AP5Z1O43299 807 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 GAS7O60861 476 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 ATG7O95352 703 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 CHRNA1P02708 482 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 RPN1P04843 607 aaKnown RBP7.68□□□□□ -1.18
BRCA1-216ENST00000484087 RSPH10BP0C881 870 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 PLCG1P19174 1290 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 CYP3A7P24462 503 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 CDC25AP30304 524 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 CLCN1P35523 988 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 WDR5P61964 334 aaKnown RBP7.68□□□□□ -1.18
BRCA1-216ENST00000484087 RBL2Q08999 1139 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 KCNB1Q14721 858 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 GRIN2CQ14957 1233 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 ZNF658Q5TYW1 1059 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-216ENST00000484087 PLA2G4FQ68DD2 849 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 SV2BQ7L1I2 683 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 NIPA1Q7RTP0 329 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 ANKRD20A12PQ8NF67 263 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 DBF4BQ8NFT6 615 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 SNX29Q8TEQ0 813 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 SLC5A5Q92911 643 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 NT5C3AQ9H0P0 336 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 WRAP73Q9P2S5 460 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-216ENST00000484087 GINS2Q9Y248 185 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 SLC4A7Q9Y6M7 1214 aa7.68□□□□□ -1.18
BRCA1-216ENST00000484087 NRCAMQ92823 1304 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-216ENST00000484087 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-216ENST00000484087 EPOPA6NHQ4 379 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 PSMD10O75832 226 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 CA3P07451 260 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 ATP2A2P16615 1042 aaKnown RBP7.67□□□□□ -1.18
BRCA1-216ENST00000484087 CLCN3P51790 818 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 UBASH3AP57075 661 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 GSDMDP57764 484 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 SMAD3P84022 425 aaKnown RBP7.67□□□□□ -1.18
BRCA1-216ENST00000484087 FANCCQ00597 558 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 PRKCEQ02156 737 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 MGAT3Q09327 533 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 DRP2Q13474 957 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 CUL4BQ13620 913 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 NCAPHQ15003 741 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 Q4G0T1 1027 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 FILIP1LQ4L180 1135 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 SPATA1Q5VX52 437 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 HAUS3Q68CZ6 603 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 KLHL10Q6JEL2 608 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 MIS18BP1Q6P0N0 1132 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 MTHFD1LQ6UB35 978 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 CCDC186Q7Z3E2 898 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 LRRC71Q8N4P6 559 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 CCDC155Q8N6L0 562 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 TMEM40Q8WWA1 233 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 STAMQ92783 540 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 HAS1Q92839 578 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 TIFAQ96CG3 184 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 KCTD12Q96CX2 325 aaKnown RBP7.67□□□□□ -1.18
BRCA1-216ENST00000484087 FAM20AQ96MK3 541 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 MBOAT7Q96N66 472 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 PLIN2Q99541 437 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 CDX2Q99626 313 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-216ENST00000484087 TEKT3Q9BXF9 490 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 SEZ6LQ9BYH1 1024 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 BLZF1Q9H2G9 400 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 SEMA6BQ9H3T3 888 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 PRDM12Q9H4Q4 367 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 AGO3Q9H9G7 860 aaKnown RBP7.67□□□□□ -1.18
BRCA1-216ENST00000484087 CDHR5Q9HBB8 845 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 KBTBD4Q9NVX7 518 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 IFNKQ9P0W0 207 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 IMPACTQ9P2X3 320 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 TCEAL9Q9UHQ7 104 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 VAV3Q9UKW4 847 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 MTUS1Q9ULD2 1270 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 NFE2L3Q9Y4A8 694 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 CDY2AQ9Y6F7 541 aa7.67□□□□□ -1.18
BRCA1-216ENST00000484087 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.67□□□□□ -1.18
BRCA1-216ENST00000484087 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-216ENST00000484087 MBLAC1A4D2B0 266 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-216ENST00000484087 WDR64B1ANS9 1081 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 ZBTB39O15060 712 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 ZNF500O60304 480 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-216ENST00000484087 UPP2O95045 317 aa7.66□□□□□ -1.18
BRCA1-216ENST00000484087 CSPG5O95196 566 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms