RNA–Protein interactions for RNA: ENST00000483708.1

COMMD2-205, Transcript of COMM domain containing 2, humanhuman

TSL 3

Gene COMMD2, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-205ENST00000483708 E9PMD0 336 aa13.93□□□□□ -0.18
COMMD2-205ENST00000483708 ZNF623O75123 536 aa13.93□□□□□ -0.18
COMMD2-205ENST00000483708 ERLIN2O94905 339 aa13.93□□□□□ -0.18
COMMD2-205ENST00000483708 EYA4O95677 639 aa13.93□□□□□ -0.18
COMMD2-205ENST00000483708 HSP90AA1P07900 732 aaKnown RBP13.93□□□□□ -0.18
COMMD2-205ENST00000483708 HOXA11P31270 313 aaPredicted RBP13.93□□□□□ -0.18
COMMD2-205ENST00000483708 SF3A1Q15459 793 aaKnown RBP13.93□□□□□ -0.18
COMMD2-205ENST00000483708 LONRF3Q496Y0 759 aa13.93□□□□□ -0.18
COMMD2-205ENST00000483708 NAALADL2Q58DX5 795 aa13.93□□□□□ -0.18
COMMD2-205ENST00000483708 IFNLR1Q8IU57 520 aaPredicted RBP13.93□□□□□ -0.18
COMMD2-205ENST00000483708 NFKBIZQ9BYH8 718 aa13.93□□□□□ -0.18
COMMD2-205ENST00000483708 POLD4Q9HCU8 107 aa13.93□□□□□ -0.18
COMMD2-205ENST00000483708 FAM105AQ9NUU6 356 aa13.93□□□□□ -0.18
COMMD2-205ENST00000483708 RNF19AQ9NV58 838 aa13.93□□□□□ -0.18
COMMD2-205ENST00000483708 PLAGL2Q9UPG8 496 aa13.93□□□□□ -0.18
COMMD2-205ENST00000483708 MTMR6Q9Y217 621 aa13.93□□□□□ -0.18
COMMD2-205ENST00000483708 PCDHB2Q9Y5E7 798 aa13.93□□□□□ -0.18
COMMD2-205ENST00000483708 PCDHB12Q9Y5F1 795 aa13.93□□□□□ -0.18
COMMD2-205ENST00000483708 GRM6O15303 877 aa13.92□□□□□ -0.18
COMMD2-205ENST00000483708 STX6O43752 255 aa13.92□□□□□ -0.18
COMMD2-205ENST00000483708 ATF7P17544 494 aaPredicted RBP13.92□□□□□ -0.18
COMMD2-205ENST00000483708 AXLP30530 894 aa13.92□□□□□ -0.18
COMMD2-205ENST00000483708 RAB27AP51159 221 aa13.92□□□□□ -0.18
COMMD2-205ENST00000483708 MBTD1Q05BQ5 628 aa13.92□□□□□ -0.18
COMMD2-205ENST00000483708 RESTQ13127 1097 aa13.92□□□□□ -0.18
COMMD2-205ENST00000483708 CLLU1OSQ5K130 101 aa13.92□□□□□ -0.18
COMMD2-205ENST00000483708 ZBTB8OSQ8IWT0 167 aa13.92□□□□□ -0.18
COMMD2-205ENST00000483708 KLHL23Q8NBE8 558 aa13.92□□□□□ -0.18
COMMD2-205ENST00000483708 HELQQ8TDG4 1101 aa13.92□□□□□ -0.18
COMMD2-205ENST00000483708 LPPQ93052 612 aa13.92□□□□□ -0.18
COMMD2-205ENST00000483708 P2RX5Q93086 422 aa13.92□□□□□ -0.18
COMMD2-205ENST00000483708 PGBD4Q96DM1 585 aa13.92□□□□□ -0.18
COMMD2-205ENST00000483708 CDK5RAP3Q96JB5 506 aa13.92□□□□□ -0.18
COMMD2-205ENST00000483708 AK8Q96MA6 479 aa13.92□□□□□ -0.18
COMMD2-205ENST00000483708 PLIN2Q99541 437 aa13.92□□□□□ -0.18
COMMD2-205ENST00000483708 LMAN2LQ9H0V9 348 aa13.92□□□□□ -0.18
COMMD2-205ENST00000483708 ALG13Q9NP73 1137 aaKnown RBP13.92□□□□□ -0.18
COMMD2-205ENST00000483708 CLIC4Q9Y696 253 aa13.92□□□□□ -0.18
COMMD2-205ENST00000483708 MYH9P35579 1960 aaKnown RBP13.91□□□□□ -0.18
COMMD2-205ENST00000483708 TSPAN1O60635 241 aa13.91□□□□□ -0.18
COMMD2-205ENST00000483708 UBA7P41226 1012 aa13.91□□□□□ -0.18
COMMD2-205ENST00000483708 FAM173BQ6P4H8 233 aa13.91□□□□□ -0.18
COMMD2-205ENST00000483708 NOTUMQ6P988 496 aa13.91□□□□□ -0.18
COMMD2-205ENST00000483708 LRRC55Q6ZSA7 311 aa13.91□□□□□ -0.18
COMMD2-205ENST00000483708 MRPL10Q7Z7H8 261 aaKnown RBP13.91□□□□□ -0.18
COMMD2-205ENST00000483708 CABP7Q86V35 215 aa13.91□□□□□ -0.18
COMMD2-205ENST00000483708 SPPL3Q8TCT6 385 aa13.91□□□□□ -0.18
COMMD2-205ENST00000483708 ATXN2LQ8WWM7 1075 aaKnown RBP13.91□□□□□ -0.18
COMMD2-205ENST00000483708 KIFAP3Q92845 792 aa13.91□□□□□ -0.18
COMMD2-205ENST00000483708 CPB2Q96IY4 423 aa13.91□□□□□ -0.18
COMMD2-205ENST00000483708 IFT74Q96LB3 600 aa13.91□□□□□ -0.18
COMMD2-205ENST00000483708 PNMA5Q96PV4 448 aa13.91□□□□□ -0.18
COMMD2-205ENST00000483708 NT5C3AQ9H0P0 336 aa13.91□□□□□ -0.18
COMMD2-205ENST00000483708 C2orf40Q9H1Z8 148 aa13.91□□□□□ -0.18
COMMD2-205ENST00000483708 ZSCAN16Q9H4T2 348 aaPredicted RBP13.91□□□□□ -0.18
COMMD2-205ENST00000483708 CWH43Q9H720 699 aa13.91□□□□□ -0.18
COMMD2-205ENST00000483708 THEGQ9P2T0 379 aa13.91□□□□□ -0.18
COMMD2-205ENST00000483708 VCANP13611 3396 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 MICAL3Q7RTP6 2002 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 SSBP05455 408 aaKnown RBP eCLIP13.9□□□□□ -0.18
COMMD2-205ENST00000483708 ITGB1P05556 798 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 LAG3P18627 525 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 LONP1P36776 959 aaKnown RBP13.9□□□□□ -0.18
COMMD2-205ENST00000483708 MRPS5P82675 430 aaKnown RBP13.9□□□□□ -0.18
COMMD2-205ENST00000483708 CEBPZQ03701 1054 aaKnown RBP13.9□□□□□ -0.18
COMMD2-205ENST00000483708 PPP2R5AQ15172 486 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 AMHR2Q16671 573 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 CSPP1Q1MSJ5 1256 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 TIGD5Q53EQ6 642 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 HYIQ5T013 277 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 UBXN11Q5T124 520 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 RINT1Q6NUQ1 792 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 GLB1LQ6UWU2 654 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 KCNK18Q7Z418 384 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 THNSL1Q8IYQ7 743 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 LRRC43Q8N309 656 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 KCTD17Q8N5Z5 321 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 COLGALT1Q8NBJ5 622 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 CNNM3Q8NE01 707 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 DEPTORQ8TB45 409 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 BSNDQ8WZ55 320 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 HLA-CQ95604 372 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 CCDC51Q96ER9 411 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 CALML4Q96GE6 196 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 MRPL9Q9BYD2 267 aaKnown RBP13.9□□□□□ -0.18
COMMD2-205ENST00000483708 CSRNP2Q9H175 543 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 PRMT7Q9NVM4 692 aaPredicted RBP13.9□□□□□ -0.18
COMMD2-205ENST00000483708 HCSTQ9UBK5 93 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 COG5Q9UP83 839 aa13.9□□□□□ -0.18
COMMD2-205ENST00000483708 COL4A6Q14031 1691 aa13.89□□□□□ -0.19
COMMD2-205ENST00000483708 MEIS3P2A8K0S8 358 aa13.89□□□□□ -0.19
COMMD2-205ENST00000483708 SLC26A4O43511 780 aa13.89□□□□□ -0.19
COMMD2-205ENST00000483708 OFD1O75665 1012 aa13.89□□□□□ -0.19
COMMD2-205ENST00000483708 CSPG5O95196 566 aa13.89□□□□□ -0.19
COMMD2-205ENST00000483708 ARF4P18085 180 aaPredicted RBP13.89□□□□□ -0.19
COMMD2-205ENST00000483708 NCLP19338 710 aaKnown RBP13.89□□□□□ -0.19
COMMD2-205ENST00000483708 MARCKSP29966 332 aaPredicted RBP13.89□□□□□ -0.19
COMMD2-205ENST00000483708 NAMPTP43490 491 aa13.89□□□□□ -0.19
COMMD2-205ENST00000483708 TMEM132AQ24JP5 1023 aa13.89□□□□□ -0.19
COMMD2-205ENST00000483708 TCEAL5Q5H9L2 206 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms