RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 FAM20AQ96MK3 541 aa8.61□□□□□ -1.03
TVP23B-203ENST00000482741 PCDHA6Q9UN73 950 aa8.61□□□□□ -1.03
TVP23B-203ENST00000482741 PCDHA8Q9Y5H6 950 aa8.61□□□□□ -1.03
TVP23B-203ENST00000482741 ATP6V1DQ9Y5K8 247 aa8.61□□□□□ -1.03
TVP23B-203ENST00000482741 SMCHD1A6NHR9 2005 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 ATMINO43313 823 aaPredicted RBP8.6□□□□□ -1.03
TVP23B-203ENST00000482741 TOMM70O94826 608 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 CHGBP05060 677 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 VDRP11473 427 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 RTN1Q16799 776 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 SYDE2Q5VT97 1194 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 TTBK2Q6IQ55 1244 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 NYAP1Q6ZVC0 841 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 TRIM22Q8IYM9 498 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 MYCT1Q8N699 235 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 ZSWIM2Q8NEG5 633 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 INPP4AQ96PE3 977 aaPredicted RBP8.6□□□□□ -1.03
TVP23B-203ENST00000482741 TBCBQ99426 244 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 IFT122Q9HBG6 1241 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 PLXNA4Q9HCM2 1894 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.6□□□□□ -1.03
TVP23B-203ENST00000482741 VWA5AO00534 786 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 RGS20O76081 388 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 NDUFB10O96000 172 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 LONP1P36776 959 aaKnown RBP8.6□□□□□ -1.03
TVP23B-203ENST00000482741 PPP1R2P41236 205 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 ZNF131P52739 623 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 SNX17Q15036 470 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 DOK7Q18PE1 504 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 TRIML1Q8N9V2 468 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 SDR42E1Q8WUS8 393 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 UNKQ9C0B0 810 aaKnown RBP8.6□□□□□ -1.03
TVP23B-203ENST00000482741 CRTAC1Q9NQ79 661 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 VAV3Q9UKW4 847 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 MAP4K5Q9Y4K4 846 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 POTEFA5A3E0 1075 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 OPA1O60313 960 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 ABLIM3O94929 683 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 PIGRP01833 764 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 TOB1P50616 345 aaPredicted RBP8.6□□□□□ -1.03
TVP23B-203ENST00000482741 FXR1P51114 621 aaKnown RBP eCLIP8.6□□□□□ -1.03
TVP23B-203ENST00000482741 TRDNQ13061 729 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 KCNB1Q14721 858 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 IFIT1BQ5T764 474 aaKnown RBP8.6□□□□□ -1.03
TVP23B-203ENST00000482741 RASIP1Q5U651 963 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 GIMAP8Q8ND71 665 aaPredicted RBP8.6□□□□□ -1.03
TVP23B-203ENST00000482741 ZDHHC1Q8WTX9 485 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 SLC2A13Q96QE2 648 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 MCM9Q9NXL9 1143 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 GTF2IRD1Q9UHL9 959 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 STRIP2Q9ULQ0 834 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 DGKBQ9Y6T7 804 aa8.6□□□□□ -1.03
TVP23B-203ENST00000482741 A0A1W2PRQ8 180 aa8.59□□□□□ -1.03
TVP23B-203ENST00000482741 CYP2D6P10635 497 aa8.59□□□□□ -1.03
TVP23B-203ENST00000482741 EEF2P13639 858 aaKnown RBP8.59□□□□□ -1.03
TVP23B-203ENST00000482741 TFAP4Q01664 338 aa8.59□□□□□ -1.03
TVP23B-203ENST00000482741 PGM2L1Q6PCE3 622 aa8.59□□□□□ -1.03
TVP23B-203ENST00000482741 SAPCD2Q86UD0 394 aa8.59□□□□□ -1.03
TVP23B-203ENST00000482741 ZNF784Q8NCA9 323 aaPredicted RBP8.59□□□□□ -1.03
TVP23B-203ENST00000482741 SLF1Q9BQI6 1058 aa8.59□□□□□ -1.03
TVP23B-203ENST00000482741 NT5C1AQ9BXI3 368 aa8.59□□□□□ -1.03
TVP23B-203ENST00000482741 NAA15Q9BXJ9 866 aaKnown RBP8.59□□□□□ -1.03
TVP23B-203ENST00000482741 HOXC10Q9NYD6 342 aa8.59□□□□□ -1.03
TVP23B-203ENST00000482741 GPSM3Q9Y4H4 160 aa8.59□□□□□ -1.03
TVP23B-203ENST00000482741 TNPO3Q9Y5L0 923 aaKnown RBP8.59□□□□□ -1.03
TVP23B-203ENST00000482741 MICAL3Q7RTP6 2002 aa8.59□□□□□ -1.03
TVP23B-203ENST00000482741 IGKV6-21A0A0C4DH24 114 aa8.59□□□□□ -1.03
TVP23B-203ENST00000482741 PTPDC1A2A3K4 754 aa8.59□□□□□ -1.03
TVP23B-203ENST00000482741 LETM1O95202 739 aaPredicted RBP8.59□□□□□ -1.03
TVP23B-203ENST00000482741 PYGMP11217 842 aa8.59□□□□□ -1.03
TVP23B-203ENST00000482741 BMP3P12645 472 aa8.59□□□□□ -1.03
TVP23B-203ENST00000482741 GARTP22102 1010 aa8.59□□□□□ -1.03
TVP23B-203ENST00000482741 TDO2P48775 406 aa8.59□□□□□ -1.03
TVP23B-203ENST00000482741 METAP2P50579 478 aaKnown RBP eCLIP8.59□□□□□ -1.03
TVP23B-203ENST00000482741 VGLL4Q14135 290 aa8.59□□□□□ -1.03
TVP23B-203ENST00000482741 SLC10A6Q3KNW5 377 aa8.59□□□□□ -1.03
TVP23B-203ENST00000482741 HHIPQ96QV1 700 aa8.59□□□□□ -1.03
TVP23B-203ENST00000482741 TUFT1Q9NNX1 390 aa8.59□□□□□ -1.03
TVP23B-203ENST00000482741 RNF181Q9P0P0 153 aa8.59□□□□□ -1.03
TVP23B-203ENST00000482741 CGNQ9P2M7 1197 aaKnown RBP8.59□□□□□ -1.03
TVP23B-203ENST00000482741 A6NNZ2 444 aa8.58□□□□□ -1.04
TVP23B-203ENST00000482741 SMTNL1A8MU46 457 aa8.58□□□□□ -1.04
TVP23B-203ENST00000482741 HAS3O00219 553 aa8.58□□□□□ -1.04
TVP23B-203ENST00000482741 BACH1O14867 736 aa8.58□□□□□ -1.04
TVP23B-203ENST00000482741 AP1G1O43747 822 aa8.58□□□□□ -1.04
TVP23B-203ENST00000482741 EGFRP00533 1210 aa8.58□□□□□ -1.04
TVP23B-203ENST00000482741 PARP1P09874 1014 aaKnown RBP8.58□□□□□ -1.04
TVP23B-203ENST00000482741 VCAM1P19320 739 aa8.58□□□□□ -1.04
TVP23B-203ENST00000482741 EPS15P42566 896 aa8.58□□□□□ -1.04
TVP23B-203ENST00000482741 KMT5BQ4FZB7 885 aa8.58□□□□□ -1.04
TVP23B-203ENST00000482741 GLIPR1L2Q4G1C9 344 aa8.58□□□□□ -1.04
TVP23B-203ENST00000482741 FAM186BQ8IYM0 893 aa8.58□□□□□ -1.04
TVP23B-203ENST00000482741 TRIM63Q969Q1 353 aa8.58□□□□□ -1.04
TVP23B-203ENST00000482741 TDRD3Q9H7E2 651 aaKnown RBP8.58□□□□□ -1.04
TVP23B-203ENST00000482741 ITGB1BP2Q9UKP3 347 aa8.58□□□□□ -1.04
TVP23B-203ENST00000482741 NUP210Q8TEM1 1887 aaPredicted RBP8.58□□□□□ -1.04
TVP23B-203ENST00000482741 FSD2A1L4K1 749 aa8.58□□□□□ -1.04
TVP23B-203ENST00000482741 MEIS1O00470 390 aa8.58□□□□□ -1.04
TVP23B-203ENST00000482741 STX6O43752 255 aa8.58□□□□□ -1.04
TVP23B-203ENST00000482741 CUTAO60888 179 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms