RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 ZBTB8OSQ8IWT0 167 aa20.35■□□□□ 0.85
SMIM4-204ENST00000482728 TRAIPQ9BWF2 469 aa20.35■□□□□ 0.85
SMIM4-204ENST00000482728 NFKBIZQ9BYH8 718 aa20.35■□□□□ 0.85
SMIM4-204ENST00000482728 RC3H2Q9HBD1 1191 aaKnown RBP20.35■□□□□ 0.85
SMIM4-204ENST00000482728 POLD4Q9HCU8 107 aa20.35■□□□□ 0.85
SMIM4-204ENST00000482728 TFIP11Q9UBB9 837 aaKnown RBP20.35■□□□□ 0.85
SMIM4-204ENST00000482728 F13A1P00488 732 aa20.34■□□□□ 0.85
SMIM4-204ENST00000482728 PLA2G4BP0C869 781 aa20.34■□□□□ 0.85
SMIM4-204ENST00000482728 FGFR1P11362 822 aa20.34■□□□□ 0.85
SMIM4-204ENST00000482728 CTNNB1P35222 781 aa20.34■□□□□ 0.85
SMIM4-204ENST00000482728 BMPR1AP36894 532 aa20.34■□□□□ 0.85
SMIM4-204ENST00000482728 RAB27AP51159 221 aa20.34■□□□□ 0.85
SMIM4-204ENST00000482728 MBTD1Q05BQ5 628 aa20.34■□□□□ 0.85
SMIM4-204ENST00000482728 SPOUT1Q5T280 376 aaKnown RBP20.34■□□□□ 0.85
SMIM4-204ENST00000482728 RINT1Q6NUQ1 792 aa20.34■□□□□ 0.85
SMIM4-204ENST00000482728 SYT2Q8N9I0 419 aaPredicted RBP20.34■□□□□ 0.85
SMIM4-204ENST00000482728 DEPTORQ8TB45 409 aa20.34■□□□□ 0.85
SMIM4-204ENST00000482728 CSRNP2Q9H175 543 aa20.34■□□□□ 0.85
SMIM4-204ENST00000482728 C2orf40Q9H1Z8 148 aa20.34■□□□□ 0.85
SMIM4-204ENST00000482728 FBXO2Q9UK22 296 aaPredicted RBP20.34■□□□□ 0.85
SMIM4-204ENST00000482728 PRRC2BQ5JSZ5 2229 aaKnown RBP20.34■□□□□ 0.85
SMIM4-204ENST00000482728 CHD7Q9P2D1 2997 aa20.34■□□□□ 0.85
SMIM4-204ENST00000482728 RB1P06400 928 aa20.33■□□□□ 0.85
SMIM4-204ENST00000482728 AXLP30530 894 aa20.33■□□□□ 0.85
SMIM4-204ENST00000482728 HOXA11P31270 313 aaPredicted RBP20.33■□□□□ 0.85
SMIM4-204ENST00000482728 TXLNAP40222 546 aa20.33■□□□□ 0.85
SMIM4-204ENST00000482728 NAMPTP43490 491 aa20.33■□□□□ 0.85
SMIM4-204ENST00000482728 GPM6BQ13491 265 aa20.33■□□□□ 0.85
SMIM4-204ENST00000482728 FOXD4L6Q3SYB3 417 aaPredicted RBP20.33■□□□□ 0.85
SMIM4-204ENST00000482728 TMEM119Q4V9L6 283 aa20.33■□□□□ 0.85
SMIM4-204ENST00000482728 FOXD4L3Q6VB84 417 aaPredicted RBP20.33■□□□□ 0.85
SMIM4-204ENST00000482728 C1orf186Q6ZWK4 172 aa20.33■□□□□ 0.85
SMIM4-204ENST00000482728 KRI1Q8N9T8 703 aaKnown RBP20.33■□□□□ 0.85
SMIM4-204ENST00000482728 PPM1EQ8WY54 764 aa20.33■□□□□ 0.85
SMIM4-204ENST00000482728 CLP1Q92989 425 aaKnown RBP20.33■□□□□ 0.85
SMIM4-204ENST00000482728 DRC1Q96MC2 740 aa20.33■□□□□ 0.85
SMIM4-204ENST00000482728 RUSC1Q9BVN2 902 aa20.33■□□□□ 0.85
SMIM4-204ENST00000482728 CCSER1Q9C0I3 900 aa20.33■□□□□ 0.85
SMIM4-204ENST00000482728 TMEM117Q9H0C3 514 aa20.33■□□□□ 0.85
SMIM4-204ENST00000482728 FAM105AQ9NUU6 356 aa20.33■□□□□ 0.85
SMIM4-204ENST00000482728 CCDC39Q9UFE4 941 aa20.33■□□□□ 0.85
SMIM4-204ENST00000482728 PCDHB2Q9Y5E7 798 aa20.33■□□□□ 0.85
SMIM4-204ENST00000482728 MRPL42Q9Y6G3 142 aaKnown RBP20.33■□□□□ 0.85
SMIM4-204ENST00000482728 TSPAN1O60635 241 aa20.32■□□□□ 0.84
SMIM4-204ENST00000482728 ZNF623O75123 536 aa20.32■□□□□ 0.84
SMIM4-204ENST00000482728 NASPP49321 788 aaPredicted RBP20.32■□□□□ 0.84
SMIM4-204ENST00000482728 KARSQ15046 597 aaKnown RBP20.32■□□□□ 0.84
SMIM4-204ENST00000482728 TMEM132AQ24JP5 1023 aa20.32■□□□□ 0.84
SMIM4-204ENST00000482728 SPECC1Q5M775 1068 aa20.32■□□□□ 0.84
SMIM4-204ENST00000482728 NOTUMQ6P988 496 aa20.32■□□□□ 0.84
SMIM4-204ENST00000482728 MICALL1Q8N3F8 863 aa20.32■□□□□ 0.84
SMIM4-204ENST00000482728 GDPD5Q8WTR4 605 aa20.32■□□□□ 0.84
SMIM4-204ENST00000482728 BSNDQ8WZ55 320 aa20.32■□□□□ 0.84
SMIM4-204ENST00000482728 PGBD4Q96DM1 585 aa20.32■□□□□ 0.84
SMIM4-204ENST00000482728 CCDC51Q96ER9 411 aa20.32■□□□□ 0.84
SMIM4-204ENST00000482728 EPSTI1Q96J88 318 aa20.32■□□□□ 0.84
SMIM4-204ENST00000482728 CLIC6Q96NY7 704 aa20.32■□□□□ 0.84
SMIM4-204ENST00000482728 TIPINQ9BVW5 301 aa20.32■□□□□ 0.84
SMIM4-204ENST00000482728 AAASQ9NRG9 546 aa20.32■□□□□ 0.84
SMIM4-204ENST00000482728 PRMT7Q9NVM4 692 aaPredicted RBP20.32■□□□□ 0.84
SMIM4-204ENST00000482728 DAXXQ9UER7 740 aaPredicted RBP20.32■□□□□ 0.84
SMIM4-204ENST00000482728 CCDC169A6NNP5 214 aa20.31■□□□□ 0.84
SMIM4-204ENST00000482728 SPTLC2O15270 562 aa20.31■□□□□ 0.84
SMIM4-204ENST00000482728 HIP1RO75146 1068 aa20.31■□□□□ 0.84
SMIM4-204ENST00000482728 LIG1P18858 919 aa20.31■□□□□ 0.84
SMIM4-204ENST00000482728 PLCG1P19174 1290 aa20.31■□□□□ 0.84
SMIM4-204ENST00000482728 POU3F3P20264 500 aaPredicted RBP20.31■□□□□ 0.84
SMIM4-204ENST00000482728 EFNA5P52803 228 aa20.31■□□□□ 0.84
SMIM4-204ENST00000482728 DHX8Q14562 1220 aaKnown RBP20.31■□□□□ 0.84
SMIM4-204ENST00000482728 CCDC85BQ15834 202 aaPredicted RBP20.31■□□□□ 0.84
SMIM4-204ENST00000482728 MAPK6Q16659 721 aa20.31■□□□□ 0.84
SMIM4-204ENST00000482728 LONRF3Q496Y0 759 aa20.31■□□□□ 0.84
SMIM4-204ENST00000482728 ZNF598Q86UK7 904 aaKnown RBP20.31■□□□□ 0.84
SMIM4-204ENST00000482728 CPB2Q96IY4 423 aa20.31■□□□□ 0.84
SMIM4-204ENST00000482728 C11orf84Q9BUA3 381 aaPredicted RBP20.31■□□□□ 0.84
SMIM4-204ENST00000482728 PLVAPQ9BX97 442 aa20.31■□□□□ 0.84
SMIM4-204ENST00000482728 LMCD1Q9NZU5 365 aa20.31■□□□□ 0.84
SMIM4-204ENST00000482728 KCND2Q9NZV8 630 aa20.31■□□□□ 0.84
SMIM4-204ENST00000482728 KCNG1Q9UIX4 513 aa20.31■□□□□ 0.84
SMIM4-204ENST00000482728 MTCH2Q9Y6C9 303 aa20.31■□□□□ 0.84
SMIM4-204ENST00000482728 MORC2Q9Y6X9 1032 aaPredicted RBP20.31■□□□□ 0.84
SMIM4-204ENST00000482728 H3BNC9 293 aa20.3■□□□□ 0.84
SMIM4-204ENST00000482728 LPXNO60711 386 aa20.3■□□□□ 0.84
SMIM4-204ENST00000482728 GUCY2CP25092 1073 aa20.3■□□□□ 0.84
SMIM4-204ENST00000482728 SLC12A3P55017 1021 aa20.3■□□□□ 0.84
SMIM4-204ENST00000482728 PEX3P56589 373 aa20.3■□□□□ 0.84
SMIM4-204ENST00000482728 RAD51AP2Q09MP3 1159 aa20.3■□□□□ 0.84
SMIM4-204ENST00000482728 DMP1Q13316 513 aaPredicted RBP20.3■□□□□ 0.84
SMIM4-204ENST00000482728 PKP1Q13835 747 aa20.3■□□□□ 0.84
SMIM4-204ENST00000482728 PTPROQ16827 1216 aa20.3■□□□□ 0.84
SMIM4-204ENST00000482728 CDCA2Q69YH5 1023 aaPredicted RBP20.3■□□□□ 0.84
SMIM4-204ENST00000482728 ATL3Q6DD88 541 aa20.3■□□□□ 0.84
SMIM4-204ENST00000482728 GLB1LQ6UWU2 654 aa20.3■□□□□ 0.84
SMIM4-204ENST00000482728 USP49Q70CQ1 688 aa20.3■□□□□ 0.84
SMIM4-204ENST00000482728 LINC00301Q8NCQ3 95 aa20.3■□□□□ 0.84
SMIM4-204ENST00000482728 CNNM3Q8NE01 707 aa20.3■□□□□ 0.84
SMIM4-204ENST00000482728 HELQQ8TDG4 1101 aa20.3■□□□□ 0.84
SMIM4-204ENST00000482728 SYMPKQ92797 1274 aaKnown RBP20.3■□□□□ 0.84
SMIM4-204ENST00000482728 LPPQ93052 612 aa20.3■□□□□ 0.84
SMIM4-204ENST00000482728 PRIMPOLQ96LW4 560 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms