RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 DMAC2Q9NW81 257 aa15.75■□□□□ 0.11
CHD3-211ENST00000481999 ADAM21Q9UKJ8 722 aa15.75■□□□□ 0.11
CHD3-211ENST00000481999 PNMA2Q9UL42 364 aa15.75■□□□□ 0.11
CHD3-211ENST00000481999 CLEC11AQ9Y240 323 aa15.75■□□□□ 0.11
CHD3-211ENST00000481999 MYPNQ86TC9 1320 aa15.75■□□□□ 0.11
CHD3-211ENST00000481999 MAP9Q49MG5 647 aa15.74■□□□□ 0.11
CHD3-211ENST00000481999 IQCEQ6IPM2 695 aa15.74■□□□□ 0.11
CHD3-211ENST00000481999 USP50Q70EL3 339 aaPredicted RBP15.74■□□□□ 0.11
CHD3-211ENST00000481999 TRIM50Q86XT4 487 aa15.74■□□□□ 0.11
CHD3-211ENST00000481999 CHST13Q8NET6 341 aa15.74■□□□□ 0.11
CHD3-211ENST00000481999 TRIM58Q8NG06 486 aa15.74■□□□□ 0.11
CHD3-211ENST00000481999 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.74■□□□□ 0.11
CHD3-211ENST00000481999 PORCNQ9H237 461 aa15.74■□□□□ 0.11
CHD3-211ENST00000481999 SUGCTQ9HAC7 445 aa15.74■□□□□ 0.11
CHD3-211ENST00000481999 LOXHD1Q8IVV2 1947 aa15.74■□□□□ 0.11
CHD3-211ENST00000481999 A0A087X0T9 212 aa15.74■□□□□ 0.11
CHD3-211ENST00000481999 BUB1O43683 1085 aa15.74■□□□□ 0.11
CHD3-211ENST00000481999 MOCS3O95396 460 aa15.74■□□□□ 0.11
CHD3-211ENST00000481999 FAM228BP0C875 321 aa15.74■□□□□ 0.11
CHD3-211ENST00000481999 NF2P35240 595 aa15.74■□□□□ 0.11
CHD3-211ENST00000481999 GNPTABQ3T906 1256 aa15.74■□□□□ 0.11
CHD3-211ENST00000481999 CAGE1Q8TC20 777 aa15.74■□□□□ 0.11
CHD3-211ENST00000481999 TMEM143Q96AN5 459 aa15.74■□□□□ 0.11
CHD3-211ENST00000481999 FGD4Q96M96 766 aa15.74■□□□□ 0.11
CHD3-211ENST00000481999 PSMB7Q99436 277 aa15.74■□□□□ 0.11
CHD3-211ENST00000481999 AGTPBP1Q9UPW5 1226 aa15.74■□□□□ 0.11
CHD3-211ENST00000481999 FRMD4BQ9Y2L6 1034 aa15.74■□□□□ 0.11
CHD3-211ENST00000481999 SYNGAP1Q96PV0 1343 aa15.74■□□□□ 0.11
CHD3-211ENST00000481999 DENND3A2RUS2 1198 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 SLC16A3O15427 465 aaKnown RBP15.73■□□□□ 0.11
CHD3-211ENST00000481999 FMO5P49326 533 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 PTK2Q05397 1052 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 HSP90B2PQ58FF3 399 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 XRRA1Q6P2D8 792 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 TMEM161BQ8NDZ6 487 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 ZBTB9Q96C00 473 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 ZBTB10Q96DT7 871 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 CAPZA3Q96KX2 299 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 SPAG5Q96R06 1193 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 POP1Q99575 1024 aaKnown RBP15.73■□□□□ 0.11
CHD3-211ENST00000481999 EDEM3Q9BZQ6 932 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 NMRK2Q9NPI5 230 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 JRKLQ9Y4A0 524 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 LOC285556D6RIA3 1793 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 ZNF185O15231 689 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 TACC1O75410 805 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 LCA5LO95447 670 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 PSAPP07602 524 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 MARK3P27448 753 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 PPP3CAQ08209 521 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 GPAT2Q6NUI2 795 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 CBWD2Q8IUF1 395 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 PROCA1Q8NCQ7 364 aaPredicted RBP15.73■□□□□ 0.11
CHD3-211ENST00000481999 VIPAS39Q9H9C1 493 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 EFCC1Q9HA90 598 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 CYP26B1Q9NR63 512 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 HSPBP1Q9NZL4 362 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 A0A0G2JMZ2 1700 aa15.73■□□□□ 0.11
CHD3-211ENST00000481999 MAFGO15525 162 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 ADRB2P07550 413 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 GCLMP48507 274 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 GTF2BQ00403 316 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 KLHL30Q0D2K2 578 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 SLC39A4Q6P5W5 647 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 FBXO16Q8IX29 292 aaPredicted RBP15.72■□□□□ 0.11
CHD3-211ENST00000481999 COPS5Q92905 334 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 PCYT2Q99447 389 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 RRAGCQ9HB90 399 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 METTL14Q9HCE5 456 aaKnown RBP15.72■□□□□ 0.11
CHD3-211ENST00000481999 VPS18Q9P253 973 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 FARP2O94887 1054 aaPredicted RBP15.72■□□□□ 0.11
CHD3-211ENST00000481999 SUPT20HL2P0C7V6 817 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 BFSP1Q12934 665 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 DRP2Q13474 957 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 PTPROQ16827 1216 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 SLC9C1Q4G0N8 1177 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 GJC2Q5T442 439 aaPredicted RBP15.72■□□□□ 0.11
CHD3-211ENST00000481999 GBP6Q6ZN66 633 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 ZNF571Q7Z3V5 609 aaPredicted RBP15.72■□□□□ 0.11
CHD3-211ENST00000481999 IRF2BP2Q7Z5L9 587 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 ATP6V0A1Q93050 837 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 SENP7Q9BQF6 1050 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 MED4Q9NPJ6 270 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 ANKEF1Q9NU02 776 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 KCNH4Q9UQ05 1017 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 ARID2Q68CP9 1835 aa15.72■□□□□ 0.11
CHD3-211ENST00000481999 GYS2P54840 703 aa15.71■□□□□ 0.11
CHD3-211ENST00000481999 NCKAP1LP55160 1127 aa15.71■□□□□ 0.11
CHD3-211ENST00000481999 DMP1Q13316 513 aaPredicted RBP15.71■□□□□ 0.11
CHD3-211ENST00000481999 HSDL1Q3SXM5 330 aa15.71■□□□□ 0.11
CHD3-211ENST00000481999 C1orf220Q5T0J3 134 aa15.71■□□□□ 0.11
CHD3-211ENST00000481999 STXBP4Q6ZWJ1 553 aa15.71■□□□□ 0.11
CHD3-211ENST00000481999 TAS1R3Q7RTX0 852 aa15.71■□□□□ 0.11
CHD3-211ENST00000481999 DNERQ8NFT8 737 aa15.71■□□□□ 0.11
CHD3-211ENST00000481999 FAM71BQ8TC56 605 aa15.71■□□□□ 0.11
CHD3-211ENST00000481999 CCDC127Q96BQ5 260 aa15.71■□□□□ 0.11
CHD3-211ENST00000481999 ZNF668Q96K58 619 aaPredicted RBP15.71■□□□□ 0.11
CHD3-211ENST00000481999 KMT5AQ9NQR1 393 aa15.71■□□□□ 0.11
CHD3-211ENST00000481999 TOPORSQ9NS56 1045 aaPredicted RBP15.71■□□□□ 0.11
CHD3-211ENST00000481999 RNF216Q9NWF9 866 aaPredicted RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms