RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 CDC42EP1Q00587 391 aa12.77□□□□□ -0.37
HPS4-212ENST00000481910 COASYQ13057 564 aa12.77□□□□□ -0.37
HPS4-212ENST00000481910 TFDP1Q14186 410 aa12.77□□□□□ -0.37
HPS4-212ENST00000481910 KIZQ2M2Z5 673 aa12.77□□□□□ -0.37
HPS4-212ENST00000481910 RPAINQ86UA6 219 aa12.77□□□□□ -0.37
HPS4-212ENST00000481910 SFR1Q86XK3 245 aa12.77□□□□□ -0.37
HPS4-212ENST00000481910 SPATA20Q8TB22 786 aa12.77□□□□□ -0.37
HPS4-212ENST00000481910 DHX38Q92620 1227 aaKnown RBP12.77□□□□□ -0.37
HPS4-212ENST00000481910 SCLT1Q96NL6 688 aa12.77□□□□□ -0.37
HPS4-212ENST00000481910 TSPAN18Q96SJ8 248 aa12.77□□□□□ -0.37
HPS4-212ENST00000481910 EXOC1Q9NV70 894 aa12.77□□□□□ -0.37
HPS4-212ENST00000481910 TBC1D7Q9P0N9 293 aa12.77□□□□□ -0.37
HPS4-212ENST00000481910 KIAA1468Q9P260 1216 aa12.77□□□□□ -0.37
HPS4-212ENST00000481910 LRRIQ4A6NIV6 560 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 STK25O00506 426 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 NAMPTP43490 491 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 NPTX2P47972 431 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 SARSP49591 514 aaKnown RBP12.76□□□□□ -0.37
HPS4-212ENST00000481910 GPC3P51654 580 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 CAPSQ13938 189 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 FAM178BQ8IXR5 827 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 NLRP7Q8WX94 980 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 MYCBPQ99417 103 aaPredicted RBP12.76□□□□□ -0.37
HPS4-212ENST00000481910 NTPCRQ9BSD7 190 aaKnown RBP12.76□□□□□ -0.37
HPS4-212ENST00000481910 MRPL44Q9H9J2 332 aaKnown RBP12.76□□□□□ -0.37
HPS4-212ENST00000481910 KMT5AQ9NQR1 393 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 RMND1Q9NWS8 449 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 SEL1LQ9UBV2 794 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 A0A087WZ62 844 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 BIN1O00499 593 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 SLC16A4O15374 487 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 GPR32O75388 356 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 CLTBP09497 229 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 CTSHP09668 335 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 CKBP12277 381 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 MRPS6P82932 125 aaKnown RBP12.76□□□□□ -0.37
HPS4-212ENST00000481910 MTA1Q13330 715 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 BFSP2Q13515 415 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 KCNB1Q14721 858 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 NT5DC1Q5TFE4 455 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 ISM2Q6H9L7 571 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 ZNF710Q8N1W2 664 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 CCDC155Q8N6L0 562 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 DEPTORQ8TB45 409 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 CAGE1Q8TC20 777 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 SPIRE2Q8WWL2 714 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 HPS3Q969F9 1004 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 FDXACB1Q9BRP7 624 aaPredicted RBP12.76□□□□□ -0.37
HPS4-212ENST00000481910 CELF4Q9BZC1 486 aaKnown RBP12.76□□□□□ -0.37
HPS4-212ENST00000481910 TMEM39AQ9NV64 488 aa12.76□□□□□ -0.37
HPS4-212ENST00000481910 FEZ2Q9UHY8 353 aaPredicted RBP12.76□□□□□ -0.37
HPS4-212ENST00000481910 CAND2O75155 1236 aa12.75□□□□□ -0.37
HPS4-212ENST00000481910 RHOBTB3O94955 611 aa12.75□□□□□ -0.37
HPS4-212ENST00000481910 EHHADHQ08426 723 aa12.75□□□□□ -0.37
HPS4-212ENST00000481910 PSMD2Q13200 908 aa12.75□□□□□ -0.37
HPS4-212ENST00000481910 TRIM71Q2Q1W2 868 aaKnown RBP12.75□□□□□ -0.37
HPS4-212ENST00000481910 FAM26FQ5R3K3 315 aa12.75□□□□□ -0.37
HPS4-212ENST00000481910 ZNF618Q5T7W0 954 aa12.75□□□□□ -0.37
HPS4-212ENST00000481910 ZNF410Q86VK4 478 aa12.75□□□□□ -0.37
HPS4-212ENST00000481910 KIFC3Q9BVG8 833 aa12.75□□□□□ -0.37
HPS4-212ENST00000481910 ADAMTS10Q9H324 1103 aa12.75□□□□□ -0.37
HPS4-212ENST00000481910 CDHR5Q9HBB8 845 aa12.75□□□□□ -0.37
HPS4-212ENST00000481910 IFT122Q9HBG6 1241 aa12.75□□□□□ -0.37
HPS4-212ENST00000481910 SLC39A2Q9NP94 309 aa12.75□□□□□ -0.37
HPS4-212ENST00000481910 OLFML3Q9NRN5 406 aa12.75□□□□□ -0.37
HPS4-212ENST00000481910 CDY2AQ9Y6F7 541 aa12.75□□□□□ -0.37
HPS4-212ENST00000481910 K7ENM7 598 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 CHRNA1P02708 482 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 NMT1P30419 496 aaKnown RBP12.74□□□□□ -0.37
HPS4-212ENST00000481910 PHKA2P46019 1235 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 POU5F1BQ06416 359 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 ZNF720Q7Z2F6 126 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 HAUS6Q7Z4H7 955 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 FIZ1Q96SL8 496 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 OSMRQ99650 979 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 HTATIP2Q9BUP3 242 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 GCOM2Q9BZD3 368 aaPredicted RBP12.74□□□□□ -0.37
HPS4-212ENST00000481910 HIPK3Q9H422 1215 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 MAN1B1Q9UKM7 699 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 DNAH12Q6ZR08 3092 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 H0YCG3 227 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 PITPNM1O00562 1244 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 DYNC1I1O14576 645 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 CSDE1O75534 798 aaKnown RBP12.74□□□□□ -0.37
HPS4-212ENST00000481910 GCNT3O95395 438 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 CCDC172P0C7W6 258 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 MAPTP10636 758 aaKnown RBP12.74□□□□□ -0.37
HPS4-212ENST00000481910 CRYBB1P53674 252 aaPredicted RBP12.74□□□□□ -0.37
HPS4-212ENST00000481910 NCKAP1LP55160 1127 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 PTENP60484 403 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 STK4Q13043 487 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 ZC2HC1CQ53FD0 456 aaPredicted RBP12.74□□□□□ -0.37
HPS4-212ENST00000481910 RBM43Q6ZSC3 357 aaKnown RBP12.74□□□□□ -0.37
HPS4-212ENST00000481910 ZBTB8OSQ8IWT0 167 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 SLC17A8Q8NDX2 589 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 NOC4LQ9BVI4 516 aaKnown RBP12.74□□□□□ -0.37
HPS4-212ENST00000481910 PPP1R12CQ9BZL4 782 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 PRDM5Q9NQX1 630 aaPredicted RBP12.74□□□□□ -0.37
HPS4-212ENST00000481910 TRPV2Q9Y5S1 764 aa12.74□□□□□ -0.37
HPS4-212ENST00000481910 ADGRA3Q8IWK6 1321 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms