RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 GTF2IRD2Q86UP8 949 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 CACNA2D3Q8IZS8 1091 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 KRT78Q8N1N4 520 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 KCNH5Q8NCM2 988 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 PPP1R13LQ8WUF5 828 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 TTC9Q92623 222 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 PAWRQ96IZ0 340 aaKnown RBP3.9□□□□□ -1.79
SMC6-208ENST00000481708 LRP2BPQ9P2M1 347 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 B4GALT6Q9UBX8 382 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 FBXL7Q9UJT9 491 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 SRPK3Q9UPE1 567 aa3.9□□□□□ -1.79
SMC6-208ENST00000481708 UBXN7O94888 489 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 HSD3B1P14060 373 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 CD247P20963 164 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 HOXD12P35452 270 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 DDIT3P35638 169 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 MAP2K3P46734 347 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 CCT5P48643 541 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 ZNF143P52747 638 aaPredicted RBP3.89□□□□□ -1.79
SMC6-208ENST00000481708 SMAD3P84022 425 aaKnown RBP3.89□□□□□ -1.79
SMC6-208ENST00000481708 PPFIA1Q13136 1202 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 SNW1Q13573 536 aaKnown RBP3.89□□□□□ -1.79
SMC6-208ENST00000481708 PMS2P11Q13670 270 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 SMAD2Q15796 467 aaKnown RBP3.89□□□□□ -1.79
SMC6-208ENST00000481708 FAM205BPQ63HN1 556 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 SAPCD2Q86UD0 394 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 C7orf61Q8IZ16 206 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 IL22RA1Q8N6P7 574 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 PCDH19Q8TAB3 1148 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 BAHD1Q8TBE0 780 aaPredicted RBP3.89□□□□□ -1.79
SMC6-208ENST00000481708 ZBTB10Q96DT7 871 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 PCGF6Q9BYE7 350 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 CDIP1Q9H305 208 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 INVSQ9Y283 1065 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 PTPDC1A2A3K4 754 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 KLHL33A6NCF5 533 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 C19orf81C9J6K1 198 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 LINC01387J3KSC0 135 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 RGS9O75916 674 aaPredicted RBP3.89□□□□□ -1.79
SMC6-208ENST00000481708 MTHFD1P11586 935 aaKnown RBP3.89□□□□□ -1.79
SMC6-208ENST00000481708 XPAP23025 273 aaPredicted RBP3.89□□□□□ -1.79
SMC6-208ENST00000481708 PTX3P26022 381 aaPredicted RBP3.89□□□□□ -1.79
SMC6-208ENST00000481708 AGFG1P52594 562 aaKnown RBP3.89□□□□□ -1.79
SMC6-208ENST00000481708 BPIFB3P59826 476 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 TGFB2P61812 414 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 SRSF2Q01130 221 aaKnown RBP3.89□□□□□ -1.79
SMC6-208ENST00000481708 MEA1Q16626 185 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 LIX1LQ8IVB5 337 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 IP6K1Q92551 441 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 STK31Q9BXU1 1019 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 CBLCQ9ULV8 474 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 EDARQ9UNE0 448 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 KIF7Q2M1P5 1343 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 CNTNAP1P78357 1384 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 FAM234BA2RU67 622 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 FRS3O43559 492 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 EFCAB14O75071 495 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 OFD1O75665 1012 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 KCNH1O95259 989 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 FAM200BP0CF97 657 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 U2AF1L5P0DN76 240 aaPredicted RBP3.89□□□□□ -1.79
SMC6-208ENST00000481708 HSPA6P17066 643 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 FGFR4P22455 802 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 MAPK4P31152 587 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 DCAF7P61962 342 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 U2AF1Q01081 240 aaKnown RBP eCLIP3.89□□□□□ -1.79
SMC6-208ENST00000481708 SURF1Q15526 300 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 FAM209BQ5JX69 171 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 APOA5Q6Q788 366 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 USP53Q70EK8 1073 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 RTL10Q7L3V2 364 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 WAPLQ7Z5K2 1190 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 MAP4K3Q8IVH8 894 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 ARHGEF39Q8N4T4 335 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 ANKRD52Q8NB46 1076 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 FRS2Q8WU20 508 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 TMEM120AQ9BXJ8 343 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 AP1M1Q9BXS5 423 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 USP26Q9BXU7 913 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 MAGEH1Q9H213 219 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 LIMCH1Q9UPQ0 1083 aa3.89□□□□□ -1.79
SMC6-208ENST00000481708 PTPRSQ13332 1948 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 SHISA8B8ZZ34 492 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 PLOD3O60568 738 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 GCP02774 474 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 SCG5P05408 212 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 MTNR1BP49286 362 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 ANO4Q32M45 955 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 DGKKQ5KSL6 1271 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 ESRP1Q6NXG1 681 aaKnown RBP3.88□□□□□ -1.79
SMC6-208ENST00000481708 ENOSF1Q7L5Y1 443 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 FASTKD5Q7L8L6 764 aaKnown RBP3.88□□□□□ -1.79
SMC6-208ENST00000481708 SRGAP1Q7Z6B7 1085 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 KIF18BQ86Y91 864 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 NPAS3Q8IXF0 933 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 NRSN1Q8IZ57 195 aa3.88□□□□□ -1.79
SMC6-208ENST00000481708 MAGEB10Q96LZ2 347 aaPredicted RBP3.88□□□□□ -1.79
SMC6-208ENST00000481708 FAM193BQ96PV7 902 aaPredicted RBP3.88□□□□□ -1.79
SMC6-208ENST00000481708 PDGFDQ9GZP0 370 aaPredicted RBP3.88□□□□□ -1.79
SMC6-208ENST00000481708 NKX2-4Q9H2Z4 354 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms