RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 CD4P01730 458 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 RSPH10BP0C881 870 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 RPL13P26373 211 aaKnown RBP9.08□□□□□ -0.96
SYNE1-225ENST00000481502 CASP1P29466 404 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 AXLP30530 894 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 PRCPP42785 496 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 ZNF165P49910 485 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 MNX1P50219 401 aaPredicted RBP9.08□□□□□ -0.96
SYNE1-225ENST00000481502 GPC3P51654 580 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 MCCD1P59942 119 aaPredicted RBP9.08□□□□□ -0.96
SYNE1-225ENST00000481502 IGBP1P78318 339 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 IRX5P78411 483 aaPredicted RBP9.08□□□□□ -0.96
SYNE1-225ENST00000481502 FKBP3Q00688 224 aaKnown RBP9.08□□□□□ -0.96
SYNE1-225ENST00000481502 ENPEPQ07075 957 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 STRN3Q13033 797 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 PAK1Q13153 545 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 BFSP2Q13515 415 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 CAPSQ13938 189 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 KYAT1Q16773 422 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 UVSSAQ2YD98 709 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 FAM47CQ5HY64 1035 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 GDF6Q6KF10 455 aaPredicted RBP9.08□□□□□ -0.96
SYNE1-225ENST00000481502 SLC39A5Q6ZMH5 540 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 HS2ST1Q7LGA3 356 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 TRMT1LQ7Z2T5 733 aaKnown RBP9.08□□□□□ -0.96
SYNE1-225ENST00000481502 APBB1IPQ7Z5R6 666 aaPredicted RBP9.08□□□□□ -0.96
SYNE1-225ENST00000481502 NECAB2Q7Z6G3 386 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 RHPN2Q8IUC4 686 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 RNF149Q8NC42 400 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 SCFD1Q8WVM8 642 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 P2RX5Q93086 422 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 TMEM143Q96AN5 459 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 TSG101Q99816 390 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 SH2D3AQ9BRG2 576 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 GBP3Q9H0R5 595 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 ADAMTS10Q9H324 1103 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 ZHX3Q9H4I2 956 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 IFT122Q9HBG6 1241 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 KIAA1586Q9HCI6 787 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 SLC39A2Q9NP94 309 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 GPRC5CQ9NQ84 441 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 TYW1Q9NV66 732 aaKnown RBP9.08□□□□□ -0.96
SYNE1-225ENST00000481502 TBX20Q9UMR3 447 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 NOD1Q9Y239 953 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 AKT3Q9Y243 479 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 STYXL1Q9Y6J8 313 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 FRMPD3Q5JV73 1810 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 ARID2Q68CP9 1835 aa9.08□□□□□ -0.96
SYNE1-225ENST00000481502 KIAA0100Q14667 2235 aaKnown RBP9.07□□□□□ -0.96
SYNE1-225ENST00000481502 DENND3A2RUS2 1198 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 LRRIQ4A6NIV6 560 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 CCDC169A6NNP5 214 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 SFI1A8K8P3 1242 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 K7ENM7 598 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 BIN1O00499 593 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 GPR32O75388 356 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 GNA14O95837 355 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 LDHAP00338 332 aaKnown RBP9.07□□□□□ -0.96
SYNE1-225ENST00000481502 GARTP22102 1010 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 EIF4BP23588 611 aaKnown RBP9.07□□□□□ -0.96
SYNE1-225ENST00000481502 TPM4P67936 248 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 MRPS6P82932 125 aaKnown RBP9.07□□□□□ -0.96
SYNE1-225ENST00000481502 RAD51AP2Q09MP3 1159 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 DPCR1Q3MIW9 517 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 ZCWPW2Q504Y3 356 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 SPATA1Q5VX52 437 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 FAM126BQ8IXS8 530 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 ZC3H3Q8IXZ2 948 aaKnown RBP9.07□□□□□ -0.96
SYNE1-225ENST00000481502 LRRC71Q8N4P6 559 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 ASAP3Q8TDY4 903 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 TRAPPC12Q8WVT3 735 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 BSNDQ8WZ55 320 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 ERCC4Q92889 916 aaPredicted RBP9.07□□□□□ -0.96
SYNE1-225ENST00000481502 CCDC51Q96ER9 411 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 CEP63Q96MT8 703 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 MKNK1Q9BUB5 465 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 CELF4Q9BZC1 486 aaKnown RBP9.07□□□□□ -0.96
SYNE1-225ENST00000481502 SENP6Q9GZR1 1112 aaPredicted RBP9.07□□□□□ -0.96
SYNE1-225ENST00000481502 CCDC113Q9H0I3 377 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 KCTD10Q9H3F6 313 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 C11orf49Q9H6J7 331 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 CHST12Q9NRB3 414 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 TBC1D7Q9P0N9 293 aa9.07□□□□□ -0.96
SYNE1-225ENST00000481502 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.06□□□□□ -0.96
SYNE1-225ENST00000481502 BECN2A8MW95 431 aa9.06□□□□□ -0.96
SYNE1-225ENST00000481502 GPR182O15218 404 aa9.06□□□□□ -0.96
SYNE1-225ENST00000481502 SLC16A4O15374 487 aa9.06□□□□□ -0.96
SYNE1-225ENST00000481502 TOM1L1O75674 476 aa9.06□□□□□ -0.96
SYNE1-225ENST00000481502 DARSP14868 501 aaKnown RBP9.06□□□□□ -0.96
SYNE1-225ENST00000481502 SFPQP23246 707 aaKnown RBP eCLIP9.06□□□□□ -0.96
SYNE1-225ENST00000481502 NMT1P30419 496 aaKnown RBP9.06□□□□□ -0.96
SYNE1-225ENST00000481502 CLCN3P51790 818 aa9.06□□□□□ -0.96
SYNE1-225ENST00000481502 NLRP11P59045 1033 aaKnown RBP9.06□□□□□ -0.96
SYNE1-225ENST00000481502 MYL5Q02045 173 aa9.06□□□□□ -0.96
SYNE1-225ENST00000481502 SPAG1Q07617 926 aa9.06□□□□□ -0.96
SYNE1-225ENST00000481502 DRP2Q13474 957 aa9.06□□□□□ -0.96
SYNE1-225ENST00000481502 IQCB1Q15051 598 aa9.06□□□□□ -0.96
SYNE1-225ENST00000481502 TRIM71Q2Q1W2 868 aaKnown RBP9.06□□□□□ -0.96
SYNE1-225ENST00000481502 ANO6Q4KMQ2 910 aa9.06□□□□□ -0.96
SYNE1-225ENST00000481502 TSHZ1Q6ZSZ6 1077 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms