RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 AGPAT5Q9NUQ2 364 aa12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 DBR1Q9UK59 544 aaKnown RBP12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 KIF3AQ9Y496 699 aa12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 FNDC1Q4ZHG4 1894 aaPredicted RBP12.68□□□□□ -0.38
RAPGEF1-207ENST00000481260 NPHP3-ACAD11A0A0J9YXS1 232 aa12.67□□□□□ -0.38
RAPGEF1-207ENST00000481260 A0A0U1RQF3 1178 aa12.67□□□□□ -0.38
RAPGEF1-207ENST00000481260 C5orf67F2Z3F1 127 aa12.67□□□□□ -0.38
RAPGEF1-207ENST00000481260 ZSCAN20P17040 1043 aaPredicted RBP12.67□□□□□ -0.38
RAPGEF1-207ENST00000481260 SFPQP23246 707 aaKnown RBP eCLIP12.67□□□□□ -0.38
RAPGEF1-207ENST00000481260 KCNQ1P51787 676 aa12.67□□□□□ -0.38
RAPGEF1-207ENST00000481260 SF3A1Q15459 793 aaKnown RBP12.67□□□□□ -0.38
RAPGEF1-207ENST00000481260 TCEAL5Q5H9L2 206 aa12.67□□□□□ -0.38
RAPGEF1-207ENST00000481260 SPECC1Q5M775 1068 aa12.67□□□□□ -0.38
RAPGEF1-207ENST00000481260 TWF2Q6IBS0 349 aaKnown RBP12.67□□□□□ -0.38
RAPGEF1-207ENST00000481260 DTHD1Q6ZMT9 781 aa12.67□□□□□ -0.38
RAPGEF1-207ENST00000481260 USP49Q70CQ1 688 aa12.67□□□□□ -0.38
RAPGEF1-207ENST00000481260 DAW1Q8N136 415 aa12.67□□□□□ -0.38
RAPGEF1-207ENST00000481260 TCP11Q8WWU5 503 aa12.67□□□□□ -0.38
RAPGEF1-207ENST00000481260 NECAB3Q96P71 396 aaPredicted RBP12.67□□□□□ -0.38
RAPGEF1-207ENST00000481260 JPH2Q9BR39 696 aaPredicted RBP12.67□□□□□ -0.38
RAPGEF1-207ENST00000481260 CXCL16Q9H2A7 254 aa12.67□□□□□ -0.38
RAPGEF1-207ENST00000481260 PLAGL2Q9UPG8 496 aa12.67□□□□□ -0.38
RAPGEF1-207ENST00000481260 HES2Q9Y543 173 aa12.67□□□□□ -0.38
RAPGEF1-207ENST00000481260 PPME1Q9Y570 386 aa12.67□□□□□ -0.38
RAPGEF1-207ENST00000481260 ARHGEF35A5YM69 484 aa12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 INO80B-WBP1J3KQ70 363 aa12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 XRCC6P12956 609 aaKnown RBP eCLIP12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 CYP11B2P19099 503 aa12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 PRPHP41219 470 aa12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 CEBPZQ03701 1054 aaKnown RBP12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 PKP1Q13835 747 aa12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 PDIA5Q14554 519 aa12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 PTPAQ15257 358 aa12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 AGMOQ6ZNB7 445 aa12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 SRGAP1Q7Z6B7 1085 aa12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 ADGRD2Q7Z7M1 963 aa12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 TMEM173Q86WV6 379 aaPredicted RBP12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 COLGALT1Q8NBJ5 622 aa12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 SMG8Q8ND04 991 aaKnown RBP12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 ERMNQ8TAM6 284 aa12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 SPPL3Q8TCT6 385 aa12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 BCL7CQ8WUZ0 217 aaPredicted RBP12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 SNX21Q969T3 373 aa12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 MRPL38Q96DV4 380 aaKnown RBP12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 CCDC43Q96MW1 224 aaKnown RBP12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 COL25A1Q9BXS0 654 aaPredicted RBP12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 INO80BQ9C086 356 aaPredicted RBP12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 ELAC1Q9H777 363 aaKnown RBP12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 FAM105AQ9NUU6 356 aa12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 INPP5FQ9Y2H2 1132 aa12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 PCDHB2Q9Y5E7 798 aa12.66□□□□□ -0.38
RAPGEF1-207ENST00000481260 LRRIQ4A6NIV6 560 aa12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 SFI1A8K8P3 1242 aa12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 NT5C1B-RDH14C9J2C7 533 aa12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 LINC01565O15544 149 aa12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 ARF4P18085 180 aaPredicted RBP12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 LIG1P18858 919 aa12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 MARCKSP29966 332 aaPredicted RBP12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 RBM10P98175 930 aaKnown RBP12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 CACNB1Q02641 598 aaPredicted RBP12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 RAD51AP2Q09MP3 1159 aa12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 MAPK7Q13164 816 aa12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 ODR4Q5SWX8 454 aa12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 SPOUT1Q5T280 376 aaKnown RBP12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 IFNLR1Q8IU57 520 aaPredicted RBP12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 IL27Q8NEV9 243 aa12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 INTS4Q96HW7 963 aaKnown RBP12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 CHAMP1Q96JM3 812 aa12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 SAMD11Q96NU1 681 aa12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 CLIC6Q96NY7 704 aa12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 TMEM117Q9H0C3 514 aa12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 CHST12Q9NRB3 414 aa12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 THEGQ9P2T0 379 aa12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 BDP1A6H8Y1 2624 aa12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 RALGAPA2Q2PPJ7 1873 aa12.65□□□□□ -0.38
RAPGEF1-207ENST00000481260 PLXNA4Q9HCM2 1894 aa12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 LAD1O00515 517 aa12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 ASAP2O43150 1006 aa12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 GAS2O43903 313 aaKnown RBP12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 OFD1O75665 1012 aa12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 EYA4O95677 639 aa12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 ERVFC1P60507 584 aa12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 CDC42EP1Q00587 391 aa12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 DLX2Q07687 328 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 HYAL1Q12794 435 aa12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 MXD4Q14582 209 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 FOXD4L6Q3SYB3 417 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 TMEM119Q4V9L6 283 aa12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 KRT79Q5XKE5 535 aa12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 EEF1DP3Q658K8 133 aa12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 HAUS3Q68CZ6 603 aa12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 CDCA2Q69YH5 1023 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 FOXD4L3Q6VB84 417 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 BRAPQ7Z569 592 aa12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 ZNF280BQ86YH2 543 aa12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 ZNF710Q8N1W2 664 aa12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 POF1BQ8WVV4 589 aa12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 USP28Q96RU2 1077 aa12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 C11orf84Q9BUA3 381 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF1-207ENST00000481260 APOL6Q9BWW8 343 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms