RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 PRPHP41219 470 aa18.91■□□□□ 0.62
HSPG2-209ENST00000480900 PTENP60484 403 aa18.91■□□□□ 0.62
HSPG2-209ENST00000480900 TCEAL5Q5H9L2 206 aa18.91■□□□□ 0.62
HSPG2-209ENST00000480900 IFNLR1Q8IU57 520 aaPredicted RBP18.91■□□□□ 0.62
HSPG2-209ENST00000480900 IGSF22Q8N9C0 903 aa18.91■□□□□ 0.62
HSPG2-209ENST00000480900 COLGALT1Q8NBJ5 622 aa18.91■□□□□ 0.62
HSPG2-209ENST00000480900 MCPH1Q8NEM0 835 aa18.91■□□□□ 0.62
HSPG2-209ENST00000480900 CWH43Q9H720 699 aa18.91■□□□□ 0.62
HSPG2-209ENST00000480900 UBE2ZQ9H832 354 aaPredicted RBP18.91■□□□□ 0.62
HSPG2-209ENST00000480900 FAM105AQ9NUU6 356 aa18.91■□□□□ 0.62
HSPG2-209ENST00000480900 STK24Q9Y6E0 443 aa18.91■□□□□ 0.62
HSPG2-209ENST00000480900 MYH11P35749 1972 aa18.91■□□□□ 0.62
HSPG2-209ENST00000480900 A0A087WWV3 80 aa18.9■□□□□ 0.62
HSPG2-209ENST00000480900 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.9■□□□□ 0.62
HSPG2-209ENST00000480900 CUL4AQ13619 759 aa18.9■□□□□ 0.62
HSPG2-209ENST00000480900 CAMK1Q14012 370 aa18.9■□□□□ 0.62
HSPG2-209ENST00000480900 COL19A1Q14993 1142 aa18.9■□□□□ 0.62
HSPG2-209ENST00000480900 ASAP3Q8TDY4 903 aa18.9■□□□□ 0.62
HSPG2-209ENST00000480900 MRPL9Q9BYD2 267 aaKnown RBP18.9■□□□□ 0.62
HSPG2-209ENST00000480900 NFKBIZQ9BYH8 718 aa18.9■□□□□ 0.62
HSPG2-209ENST00000480900 HCSTQ9UBK5 93 aa18.9■□□□□ 0.62
HSPG2-209ENST00000480900 LRWD1Q9UFC0 647 aa18.9■□□□□ 0.62
HSPG2-209ENST00000480900 SPTBN5Q9NRC6 3674 aaKnown RBP18.89■□□□□ 0.62
HSPG2-209ENST00000480900 NCK2O43639 380 aa18.89■□□□□ 0.61
HSPG2-209ENST00000480900 ERLIN2O94905 339 aa18.89■□□□□ 0.61
HSPG2-209ENST00000480900 BMP1P13497 986 aa18.89■□□□□ 0.61
HSPG2-209ENST00000480900 GLRA2P23416 452 aa18.89■□□□□ 0.61
HSPG2-209ENST00000480900 HOXA11P31270 313 aaPredicted RBP18.89■□□□□ 0.61
HSPG2-209ENST00000480900 CCT6AP40227 531 aaKnown RBP18.89■□□□□ 0.61
HSPG2-209ENST00000480900 KCNQ1P51787 676 aa18.89■□□□□ 0.61
HSPG2-209ENST00000480900 UBE3AQ05086 875 aa18.89■□□□□ 0.61
HSPG2-209ENST00000480900 CAPSQ13938 189 aa18.89■□□□□ 0.61
HSPG2-209ENST00000480900 LARP1BQ659C4 914 aaKnown RBP18.89■□□□□ 0.61
HSPG2-209ENST00000480900 LRRC55Q6ZSA7 311 aa18.89■□□□□ 0.61
HSPG2-209ENST00000480900 HELQQ8TDG4 1101 aa18.89■□□□□ 0.61
HSPG2-209ENST00000480900 ADAMTS19Q8TE59 1207 aa18.89■□□□□ 0.61
HSPG2-209ENST00000480900 POLR3FQ9H1D9 316 aaPredicted RBP18.89■□□□□ 0.61
HSPG2-209ENST00000480900 TDRD15B5MCY1 1934 aaKnown RBP18.89■□□□□ 0.61
HSPG2-209ENST00000480900 ARHGEF35A5YM69 484 aa18.88■□□□□ 0.61
HSPG2-209ENST00000480900 FGF18O76093 207 aa18.88■□□□□ 0.61
HSPG2-209ENST00000480900 DNAJB1P25685 340 aa18.88■□□□□ 0.61
HSPG2-209ENST00000480900 AXLP30530 894 aa18.88■□□□□ 0.61
HSPG2-209ENST00000480900 PPM1AP35813 382 aa18.88■□□□□ 0.61
HSPG2-209ENST00000480900 ATP2C1P98194 919 aaPredicted RBP18.88■□□□□ 0.61
HSPG2-209ENST00000480900 PADI6Q6TGC4 694 aa18.88■□□□□ 0.61
HSPG2-209ENST00000480900 THNSL1Q8IYQ7 743 aa18.88■□□□□ 0.61
HSPG2-209ENST00000480900 POF1BQ8WVV4 589 aa18.88■□□□□ 0.61
HSPG2-209ENST00000480900 PABPC5Q96DU9 382 aaKnown RBP18.88■□□□□ 0.61
HSPG2-209ENST00000480900 PCDHB2Q9Y5E7 798 aa18.88■□□□□ 0.61
HSPG2-209ENST00000480900 INO80B-WBP1J3KQ70 363 aa18.87■□□□□ 0.61
HSPG2-209ENST00000480900 CYP11B2P19099 503 aa18.87■□□□□ 0.61
HSPG2-209ENST00000480900 MBTD1Q05BQ5 628 aa18.87■□□□□ 0.61
HSPG2-209ENST00000480900 LEXMQ3ZCV2 418 aa18.87■□□□□ 0.61
HSPG2-209ENST00000480900 KCNT2Q6UVM3 1135 aa18.87■□□□□ 0.61
HSPG2-209ENST00000480900 GLB1LQ6UWU2 654 aa18.87■□□□□ 0.61
HSPG2-209ENST00000480900 DTHD1Q6ZMT9 781 aa18.87■□□□□ 0.61
HSPG2-209ENST00000480900 SNX29Q8TEQ0 813 aa18.87■□□□□ 0.61
HSPG2-209ENST00000480900 PPP2R3CQ969Q6 453 aa18.87■□□□□ 0.61
HSPG2-209ENST00000480900 PGBD4Q96DM1 585 aa18.87■□□□□ 0.61
HSPG2-209ENST00000480900 CCDC51Q96ER9 411 aa18.87■□□□□ 0.61
HSPG2-209ENST00000480900 ZNF558Q96NG5 402 aa18.87■□□□□ 0.61
HSPG2-209ENST00000480900 LZTS1Q9Y250 596 aa18.87■□□□□ 0.61
HSPG2-209ENST00000480900 TSPAN1O60635 241 aa18.86■□□□□ 0.61
HSPG2-209ENST00000480900 KCNA5P22460 613 aa18.86■□□□□ 0.61
HSPG2-209ENST00000480900 NCBP1Q09161 790 aaKnown RBP18.86■□□□□ 0.61
HSPG2-209ENST00000480900 HYAL1Q12794 435 aa18.86■□□□□ 0.61
HSPG2-209ENST00000480900 IL17AQ16552 155 aa18.86■□□□□ 0.61
HSPG2-209ENST00000480900 ECM1Q16610 540 aa18.86■□□□□ 0.61
HSPG2-209ENST00000480900 UBXN11Q5T124 520 aa18.86■□□□□ 0.61
HSPG2-209ENST00000480900 KRT79Q5XKE5 535 aa18.86■□□□□ 0.61
HSPG2-209ENST00000480900 NOTUMQ6P988 496 aa18.86■□□□□ 0.61
HSPG2-209ENST00000480900 MRPL10Q7Z7H8 261 aaKnown RBP18.86■□□□□ 0.61
HSPG2-209ENST00000480900 LPPQ93052 612 aa18.86■□□□□ 0.61
HSPG2-209ENST00000480900 GPRC5CQ9NQ84 441 aa18.86■□□□□ 0.61
HSPG2-209ENST00000480900 TLR9Q9NR96 1032 aa18.86■□□□□ 0.61
HSPG2-209ENST00000480900 CNTNAP2Q9UHC6 1331 aa18.85■□□□□ 0.61
HSPG2-209ENST00000480900 CARNS1A5YM72 827 aa18.85■□□□□ 0.61
HSPG2-209ENST00000480900 CSPG5O95196 566 aa18.85■□□□□ 0.61
HSPG2-209ENST00000480900 PDCP20941 246 aa18.85■□□□□ 0.61
HSPG2-209ENST00000480900 PLCB3Q01970 1234 aa18.85■□□□□ 0.61
HSPG2-209ENST00000480900 AMHR2Q16671 573 aa18.85■□□□□ 0.61
HSPG2-209ENST00000480900 ARL6IP4Q66PJ3 421 aaKnown RBP18.85■□□□□ 0.61
HSPG2-209ENST00000480900 MAEAQ7L5Y9 396 aa18.85■□□□□ 0.61
HSPG2-209ENST00000480900 BRAPQ7Z569 592 aa18.85■□□□□ 0.61
HSPG2-209ENST00000480900 CNNM3Q8NE01 707 aa18.85■□□□□ 0.61
HSPG2-209ENST00000480900 MRPS27Q92552 414 aaKnown RBP18.85■□□□□ 0.61
HSPG2-209ENST00000480900 UHRF1Q96T88 793 aaPredicted RBP18.85■□□□□ 0.61
HSPG2-209ENST00000480900 BHMT2Q9H2M3 363 aa18.85■□□□□ 0.61
HSPG2-209ENST00000480900 DDX19AQ9NUU7 478 aaKnown RBP18.85■□□□□ 0.61
HSPG2-209ENST00000480900 SPG21Q9NZD8 308 aa18.85■□□□□ 0.61
HSPG2-209ENST00000480900 KIAA1024Q9UPX6 916 aa18.85■□□□□ 0.61
HSPG2-209ENST00000480900 MUC3AQ02505 3323 aa18.84■□□□□ 0.61
HSPG2-209ENST00000480900 LRRIQ4A6NIV6 560 aa18.84■□□□□ 0.61
HSPG2-209ENST00000480900 MEIS3P2A8K0S8 358 aa18.84■□□□□ 0.61
HSPG2-209ENST00000480900 OFD1O75665 1012 aa18.84■□□□□ 0.61
HSPG2-209ENST00000480900 NCLP19338 710 aaKnown RBP18.84■□□□□ 0.61
HSPG2-209ENST00000480900 IRS1P35568 1242 aa18.84■□□□□ 0.61
HSPG2-209ENST00000480900 CTC1Q2NKJ3 1217 aa18.84■□□□□ 0.61
HSPG2-209ENST00000480900 LONRF3Q496Y0 759 aa18.84■□□□□ 0.61
HSPG2-209ENST00000480900 NOMO2Q5JPE7 1267 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms