RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 AKR1B10O60218 316 aa18.27■□□□□ 0.51
SH3D21-203ENST00000480549 NPEPPSP55786 919 aa18.27■□□□□ 0.51
SH3D21-203ENST00000480549 SLC9C1Q4G0N8 1177 aa18.27■□□□□ 0.51
SH3D21-203ENST00000480549 NFASCO94856 1347 aa18.27■□□□□ 0.51
SH3D21-203ENST00000480549 GTPBP10A4D1E9 387 aaKnown RBP18.26■□□□□ 0.51
SH3D21-203ENST00000480549 STBD1O95210 358 aa18.26■□□□□ 0.51
SH3D21-203ENST00000480549 TFRCP02786 760 aaKnown RBP18.26■□□□□ 0.51
SH3D21-203ENST00000480549 UCHL3P15374 230 aa18.26■□□□□ 0.51
SH3D21-203ENST00000480549 GFPT1Q06210 699 aaPredicted RBP18.26■□□□□ 0.51
SH3D21-203ENST00000480549 KIF5AQ12840 1032 aa18.26■□□□□ 0.51
SH3D21-203ENST00000480549 EHBP1Q8NDI1 1231 aa18.26■□□□□ 0.51
SH3D21-203ENST00000480549 TSGA10Q9BZW7 698 aa18.26■□□□□ 0.51
SH3D21-203ENST00000480549 GPRC5CQ9NQ84 441 aa18.26■□□□□ 0.51
SH3D21-203ENST00000480549 TCEAL9Q9UHQ7 104 aa18.26■□□□□ 0.51
SH3D21-203ENST00000480549 CSADQ9Y600 493 aa18.26■□□□□ 0.51
SH3D21-203ENST00000480549 LRRIQ3A6PVS8 624 aaPredicted RBP18.26■□□□□ 0.51
SH3D21-203ENST00000480549 STAM2O75886 525 aa18.26■□□□□ 0.51
SH3D21-203ENST00000480549 CYP2J2P51589 502 aa18.26■□□□□ 0.51
SH3D21-203ENST00000480549 ALCAMQ13740 583 aa18.26■□□□□ 0.51
SH3D21-203ENST00000480549 SRGAP1Q7Z6B7 1085 aa18.26■□□□□ 0.51
SH3D21-203ENST00000480549 CHST13Q8NET6 341 aa18.26■□□□□ 0.51
SH3D21-203ENST00000480549 ST6GALNAC4Q9H4F1 302 aa18.26■□□□□ 0.51
SH3D21-203ENST00000480549 BTBD7Q9P203 1132 aa18.26■□□□□ 0.51
SH3D21-203ENST00000480549 KLHL33A6NCF5 533 aa18.26■□□□□ 0.51
SH3D21-203ENST00000480549 SPATA31C2B4DYI2 1134 aa18.26■□□□□ 0.51
SH3D21-203ENST00000480549 PPP1R12BO60237 982 aaPredicted RBP18.26■□□□□ 0.51
SH3D21-203ENST00000480549 ZNF862O60290 1169 aa18.26■□□□□ 0.51
SH3D21-203ENST00000480549 SSR1P43307 286 aaKnown RBP18.26■□□□□ 0.51
SH3D21-203ENST00000480549 RAPGEF1Q13905 1077 aa18.26■□□□□ 0.51
SH3D21-203ENST00000480549 XKR9Q5GH70 373 aa18.26■□□□□ 0.51
SH3D21-203ENST00000480549 KIRREL3Q8IZU9 778 aa18.26■□□□□ 0.51
SH3D21-203ENST00000480549 TMEM174Q8WUU8 243 aa18.26■□□□□ 0.51
SH3D21-203ENST00000480549 VSNL1P62760 191 aa18.25■□□□□ 0.51
SH3D21-203ENST00000480549 TDRD12Q587J7 1177 aaKnown RBP18.25■□□□□ 0.51
SH3D21-203ENST00000480549 TRAPPC11Q7Z392 1133 aa18.25■□□□□ 0.51
SH3D21-203ENST00000480549 CCDC43Q96MW1 224 aaKnown RBP18.25■□□□□ 0.51
SH3D21-203ENST00000480549 FBXL5Q9UKA1 691 aa18.25■□□□□ 0.51
SH3D21-203ENST00000480549 AJAP1Q9UKB5 411 aaPredicted RBP18.25■□□□□ 0.51
SH3D21-203ENST00000480549 LRRC37A2A6NM11 1700 aa18.25■□□□□ 0.51
SH3D21-203ENST00000480549 PJA2O43164 708 aa18.25■□□□□ 0.51
SH3D21-203ENST00000480549 NCKAP1LP55160 1127 aa18.25■□□□□ 0.51
SH3D21-203ENST00000480549 GTF2BQ00403 316 aa18.25■□□□□ 0.51
SH3D21-203ENST00000480549 MYBPC2Q14324 1141 aa18.25■□□□□ 0.51
SH3D21-203ENST00000480549 TRMT1LQ7Z2T5 733 aaKnown RBP18.25■□□□□ 0.51
SH3D21-203ENST00000480549 FMNL3Q8IVF7 1028 aa18.25■□□□□ 0.51
SH3D21-203ENST00000480549 HOMEZQ8IX15 550 aa18.25■□□□□ 0.51
SH3D21-203ENST00000480549 SYCP3Q8IZU3 236 aa18.25■□□□□ 0.51
SH3D21-203ENST00000480549 FAM133AQ8N9E0 248 aa18.25■□□□□ 0.51
SH3D21-203ENST00000480549 SYT17Q9BSW7 474 aa18.25■□□□□ 0.51
SH3D21-203ENST00000480549 TRIM6Q9C030 488 aaPredicted RBP18.25■□□□□ 0.51
SH3D21-203ENST00000480549 GCNT4Q9P109 453 aa18.25■□□□□ 0.51
SH3D21-203ENST00000480549 GABBR1Q9UBS5 961 aa18.25■□□□□ 0.51
SH3D21-203ENST00000480549 TISP43B9A030 160 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 ATP1A1P05023 1023 aaKnown RBP18.24■□□□□ 0.51
SH3D21-203ENST00000480549 RIN2Q8WYP3 895 aaPredicted RBP18.24■□□□□ 0.51
SH3D21-203ENST00000480549 CDHR1Q96JP9 859 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 PLCD4Q9BRC7 762 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 TMEM206Q9H813 350 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 JPH1Q9HDC5 661 aaPredicted RBP18.24■□□□□ 0.51
SH3D21-203ENST00000480549 MYO6Q9UM54 1294 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 FRMD4BQ9Y2L6 1034 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 A0A0G2JLL6 359 aaPredicted RBP18.24■□□□□ 0.51
SH3D21-203ENST00000480549 MACROD2A1Z1Q3 448 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 ENC1O14682 589 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 FSTL1Q12841 308 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 C9orf131Q5VYM1 1079 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 PAPD7Q5XG87 772 aaKnown RBP18.24■□□□□ 0.51
SH3D21-203ENST00000480549 PRRT2Q7Z6L0 340 aaPredicted RBP18.24■□□□□ 0.51
SH3D21-203ENST00000480549 CEP112Q8N8E3 955 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 IWS1Q96ST2 819 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 CENPHQ9H3R5 247 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 ELP3Q9H9T3 547 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 MAGEA1P43355 309 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 CNTN2Q02246 1040 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 ASIC2Q16515 512 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 HAUS6Q7Z4H7 955 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 IRF2BP2Q7Z5L9 587 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 RIOX2Q8IUF8 465 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 C12orf56Q8IXR9 622 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 DNERQ8NFT8 737 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 CLMNQ96JQ2 1002 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 ACCSQ96QU6 501 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 HDAC6Q9UBN7 1215 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 SLC9A2Q9UBY0 812 aa18.24■□□□□ 0.51
SH3D21-203ENST00000480549 MYH9P35579 1960 aaKnown RBP18.23■□□□□ 0.51
SH3D21-203ENST00000480549 SKAP2O75563 359 aaPredicted RBP18.23■□□□□ 0.51
SH3D21-203ENST00000480549 IREB2P48200 963 aaKnown RBP18.23■□□□□ 0.51
SH3D21-203ENST00000480549 FMO5P49326 533 aa18.23■□□□□ 0.51
SH3D21-203ENST00000480549 CCNHP51946 323 aaPredicted RBP18.23■□□□□ 0.51
SH3D21-203ENST00000480549 JAM2P57087 298 aa18.23■□□□□ 0.51
SH3D21-203ENST00000480549 IRX1P78414 480 aaPredicted RBP18.23■□□□□ 0.51
SH3D21-203ENST00000480549 SP2Q02086 613 aa18.23■□□□□ 0.51
SH3D21-203ENST00000480549 WHAMMP3Q1A5X7 153 aa18.23■□□□□ 0.51
SH3D21-203ENST00000480549 TACO1Q9BSH4 297 aaKnown RBP18.23■□□□□ 0.51
SH3D21-203ENST00000480549 PEX3P56589 373 aa18.23■□□□□ 0.51
SH3D21-203ENST00000480549 PPATQ06203 517 aa18.23■□□□□ 0.51
SH3D21-203ENST00000480549 ACTN3Q08043 901 aaPredicted RBP18.23■□□□□ 0.51
SH3D21-203ENST00000480549 GNPTABQ3T906 1256 aa18.23■□□□□ 0.51
SH3D21-203ENST00000480549 ABHD15Q6UXT9 468 aa18.23■□□□□ 0.51
SH3D21-203ENST00000480549 CCDC60Q8IWA6 550 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms