RNA–Protein interactions for RNA: ENST00000480064.1

PBRM1-220, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 919 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-220ENST00000480064 HLA-DQA1Q5Y7H0 255 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 KCTD1Q719H9 257 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 SPACA3Q8IXA5 215 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 Q8N1Y9 231 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 OXR1Q8N573 874 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 USHBP1Q8N6Y0 703 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 UHMK1Q8TAS1 419 aaKnown RBP7.4□□□□□ -1.22
PBRM1-220ENST00000480064 ERCC4Q92889 916 aaPredicted RBP7.4□□□□□ -1.22
PBRM1-220ENST00000480064 TUBGCP5Q96RT8 1024 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 PNPLA8Q9NP80 782 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 SLC6A20Q9NP91 592 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 GULP1Q9UBP9 304 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 DUSP13Q9UII6 198 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 TPCN1Q9ULQ1 816 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 CEP83Q9Y592 693 aa7.4□□□□□ -1.22
PBRM1-220ENST00000480064 A0A087WV62 115 aa7.39□□□□□ -1.23
PBRM1-220ENST00000480064 M0R3H8 397 aa7.39□□□□□ -1.23
PBRM1-220ENST00000480064 FTLP02792 175 aaPredicted RBP7.39□□□□□ -1.23
PBRM1-220ENST00000480064 SDHAP31040 664 aa7.39□□□□□ -1.23
PBRM1-220ENST00000480064 CCT2P78371 535 aaKnown RBP7.39□□□□□ -1.23
PBRM1-220ENST00000480064 GPSM2P81274 684 aa7.39□□□□□ -1.23
PBRM1-220ENST00000480064 CDK17Q00537 523 aa7.39□□□□□ -1.23
PBRM1-220ENST00000480064 IKZF1Q13422 519 aa7.39□□□□□ -1.23
PBRM1-220ENST00000480064 NKPD1Q17RQ9 610 aa7.39□□□□□ -1.23
PBRM1-220ENST00000480064 FAM209BQ5JX69 171 aa7.39□□□□□ -1.23
PBRM1-220ENST00000480064 MROH9Q5TGP6 573 aa7.39□□□□□ -1.23
PBRM1-220ENST00000480064 CDKAL1Q5VV42 579 aa7.39□□□□□ -1.23
PBRM1-220ENST00000480064 PPP4R3AQ6IN85 833 aa7.39□□□□□ -1.23
PBRM1-220ENST00000480064 KLHDC10Q6PID8 442 aa7.39□□□□□ -1.23
PBRM1-220ENST00000480064 WAPLQ7Z5K2 1190 aa7.39□□□□□ -1.23
PBRM1-220ENST00000480064 CCDC33Q8N5R6 958 aa7.39□□□□□ -1.23
PBRM1-220ENST00000480064 C1orf131Q8NDD1 294 aaKnown RBP7.39□□□□□ -1.23
PBRM1-220ENST00000480064 KLHDC4Q8TBB5 520 aa7.39□□□□□ -1.23
PBRM1-220ENST00000480064 SH3RF2Q8TEC5 729 aa7.39□□□□□ -1.23
PBRM1-220ENST00000480064 PHKBQ93100 1093 aa7.39□□□□□ -1.23
PBRM1-220ENST00000480064 RGMAQ96B86 450 aa7.39□□□□□ -1.23
PBRM1-220ENST00000480064 ARL8AQ96BM9 186 aa7.39□□□□□ -1.23
PBRM1-220ENST00000480064 MTFMTQ96DP5 389 aaKnown RBP7.39□□□□□ -1.23
PBRM1-220ENST00000480064 FCRL2Q96LA5 508 aaPredicted RBP7.39□□□□□ -1.23
PBRM1-220ENST00000480064 LRFN3Q9BTN0 628 aa7.39□□□□□ -1.23
PBRM1-220ENST00000480064 DUSP15Q9H1R2 295 aaPredicted RBP7.39□□□□□ -1.23
PBRM1-220ENST00000480064 DCP1AQ9NPI6 582 aaPredicted RBP7.39□□□□□ -1.23
PBRM1-220ENST00000480064 PRDM7Q9NQW5 492 aa7.39□□□□□ -1.23
PBRM1-220ENST00000480064 EVLQ9UI08 416 aaPredicted RBP7.39□□□□□ -1.23
PBRM1-220ENST00000480064 J3KRW8 73 aa7.38□□□□□ -1.23
PBRM1-220ENST00000480064 ADAMTS3O15072 1205 aa7.38□□□□□ -1.23
PBRM1-220ENST00000480064 FUCA1P04066 466 aa7.38□□□□□ -1.23
PBRM1-220ENST00000480064 RPL10P27635 214 aaKnown RBP7.38□□□□□ -1.23
PBRM1-220ENST00000480064 LGALS4P56470 323 aa7.38□□□□□ -1.23
PBRM1-220ENST00000480064 ZP2Q05996 745 aa7.38□□□□□ -1.23
PBRM1-220ENST00000480064 GRM1Q13255 1194 aa7.38□□□□□ -1.23
PBRM1-220ENST00000480064 MOGSQ13724 837 aa7.38□□□□□ -1.23
PBRM1-220ENST00000480064 ZNF124Q15973 351 aa7.38□□□□□ -1.23
PBRM1-220ENST00000480064 TTC38Q5R3I4 469 aa7.38□□□□□ -1.23
PBRM1-220ENST00000480064 FKBP15Q5T1M5 1219 aa7.38□□□□□ -1.23
PBRM1-220ENST00000480064 PRAMEF9Q5VWM5 478 aa7.38□□□□□ -1.23
PBRM1-220ENST00000480064 SYTL1Q8IYJ3 562 aa7.38□□□□□ -1.23
PBRM1-220ENST00000480064 HIPK4Q8NE63 616 aa7.38□□□□□ -1.23
PBRM1-220ENST00000480064 FLAD1Q8NFF5 587 aa7.38□□□□□ -1.23
PBRM1-220ENST00000480064 DPF3Q92784 378 aa7.38□□□□□ -1.23
PBRM1-220ENST00000480064 HDAC10Q969S8 669 aa7.38□□□□□ -1.23
PBRM1-220ENST00000480064 SYTL4Q96C24 671 aaPredicted RBP7.38□□□□□ -1.23
PBRM1-220ENST00000480064 PPM1MQ96MI6 270 aa7.38□□□□□ -1.23
PBRM1-220ENST00000480064 SEMA4AQ9H3S1 761 aa7.38□□□□□ -1.23
PBRM1-220ENST00000480064 OGDHLQ9ULD0 1010 aa7.38□□□□□ -1.23
PBRM1-220ENST00000480064 PCDHGB2Q9Y5G2 931 aa7.38□□□□□ -1.23
PBRM1-220ENST00000480064 NR2E3Q9Y5X4 410 aa7.38□□□□□ -1.23
PBRM1-220ENST00000480064 X6R8D5 127 aa7.38□□□□□ -1.23
PBRM1-220ENST00000480064 PRSS38A1L453 326 aa7.37□□□□□ -1.23
PBRM1-220ENST00000480064 POM121BA6NF01 834 aa7.37□□□□□ -1.23
PBRM1-220ENST00000480064 HTRA2O43464 458 aaPredicted RBP7.37□□□□□ -1.23
PBRM1-220ENST00000480064 NCK2O43639 380 aa7.37□□□□□ -1.23
PBRM1-220ENST00000480064 BUB1BO60566 1050 aaPredicted RBP7.37□□□□□ -1.23
PBRM1-220ENST00000480064 SKAP2O75563 359 aaPredicted RBP7.37□□□□□ -1.23
PBRM1-220ENST00000480064 MYF5P13349 255 aa7.37□□□□□ -1.23
PBRM1-220ENST00000480064 PTPN1P18031 435 aaKnown RBP7.37□□□□□ -1.23
PBRM1-220ENST00000480064 TAF12Q16514 161 aa7.37□□□□□ -1.23
PBRM1-220ENST00000480064 ZBTB41Q5SVQ8 909 aa7.37□□□□□ -1.23
PBRM1-220ENST00000480064 CATSPEREQ5SY80 951 aa7.37□□□□□ -1.23
PBRM1-220ENST00000480064 LCE1DQ5T752 114 aa7.37□□□□□ -1.23
PBRM1-220ENST00000480064 BTBD8Q5XKL5 378 aa7.37□□□□□ -1.23
PBRM1-220ENST00000480064 LIX1LQ8IVB5 337 aa7.37□□□□□ -1.23
PBRM1-220ENST00000480064 ZNF527Q8NB42 609 aa7.37□□□□□ -1.23
PBRM1-220ENST00000480064 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.37□□□□□ -1.23
PBRM1-220ENST00000480064 NRG4Q8WWG1 115 aa7.37□□□□□ -1.23
PBRM1-220ENST00000480064 RIN2Q8WYP3 895 aaPredicted RBP7.37□□□□□ -1.23
PBRM1-220ENST00000480064 APIPQ96GX9 242 aa7.37□□□□□ -1.23
PBRM1-220ENST00000480064 KIAA1586Q9HCI6 787 aa7.37□□□□□ -1.23
PBRM1-220ENST00000480064 ERVK13-1Q9NX77 482 aa7.37□□□□□ -1.23
PBRM1-220ENST00000480064 HDAC9Q9UKV0 1011 aa7.37□□□□□ -1.23
PBRM1-220ENST00000480064 GPR52Q9Y2T5 361 aa7.37□□□□□ -1.23
PBRM1-220ENST00000480064 CFAP20Q9Y6A4 193 aaKnown RBP7.37□□□□□ -1.23
PBRM1-220ENST00000480064 H3BS24 57 aa7.36□□□□□ -1.23
PBRM1-220ENST00000480064 RBAK-RBAKDNI3L0D1 243 aa7.36□□□□□ -1.23
PBRM1-220ENST00000480064 NCAM2O15394 837 aa7.36□□□□□ -1.23
PBRM1-220ENST00000480064 PHGDHO43175 533 aaKnown RBP7.36□□□□□ -1.23
PBRM1-220ENST00000480064 FRS3O43559 492 aa7.36□□□□□ -1.23
PBRM1-220ENST00000480064 PRPF6O94906 941 aaKnown RBP7.36□□□□□ -1.23
PBRM1-220ENST00000480064 CSTBP04080 98 aaKnown RBP7.36□□□□□ -1.23
PBRM1-220ENST00000480064 SMARCA1P28370 1054 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms