RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 FMNL3Q8IVF7 1028 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 KSR1Q8IVT5 923 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 SMC1BQ8NDV3 1235 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 DEPTORQ8TB45 409 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 BAP1Q92560 729 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 GLG1Q92896 1179 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 SH2D3AQ9BRG2 576 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 LSM14BQ9BX40 385 aaKnown RBP12.04□□□□□ -0.48
VTI1A-204ENST00000480057 ZFYVE28Q9HCC9 887 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 KIAA1586Q9HCI6 787 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 AGPAT5Q9NUQ2 364 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 ERAP1Q9NZ08 941 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 HSPBP1Q9NZL4 362 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 ADGRG1Q9Y653 693 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 COL1A2P08123 1366 aa12.04□□□□□ -0.48
VTI1A-204ENST00000480057 PPFIA4O75335 1185 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 RFX1P22670 979 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 GLRA2P23416 452 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 CNGA1P29973 690 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 CYLC1P35663 651 aaPredicted RBP12.03□□□□□ -0.48
VTI1A-204ENST00000480057 TM4SF4P48230 202 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 CYP2J2P51589 502 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 EFNA5P52803 228 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 STRN3Q13033 797 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 MXD4Q14582 209 aaPredicted RBP12.03□□□□□ -0.48
VTI1A-204ENST00000480057 EXOC3L4Q17RC7 722 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 DUSP28Q4G0W2 176 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 DCAF17Q5H9S7 520 aaPredicted RBP12.03□□□□□ -0.48
VTI1A-204ENST00000480057 OLFML2BQ68BL8 750 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 SLFN12LQ6IEE8 588 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 PDXDC1Q6P996 788 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 WDR59Q6PJI9 974 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 TOGARAM2Q6ZUX3 1019 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 USP37Q86T82 979 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 SOCS4Q8WXH5 440 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 VTI1AQ96AJ9 217 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 C16orf45Q96MC5 204 aaPredicted RBP12.03□□□□□ -0.48
VTI1A-204ENST00000480057 FBXL18Q96ME1 805 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 GANQ9H2C0 597 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 PDGFCQ9NRA1 345 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 FAM207AQ9NSI2 230 aaPredicted RBP12.03□□□□□ -0.48
VTI1A-204ENST00000480057 TRMT1Q9NXH9 659 aaKnown RBP12.03□□□□□ -0.48
VTI1A-204ENST00000480057 CPA4Q9UI42 421 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 EPN1Q9Y6I3 576 aaPredicted RBP12.03□□□□□ -0.48
VTI1A-204ENST00000480057 STYXL1Q9Y6J8 313 aa12.03□□□□□ -0.48
VTI1A-204ENST00000480057 SSU72P8A0A1W2PR75 194 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 EIF3CLB5ME19 914 aaKnown RBP12.02□□□□□ -0.49
VTI1A-204ENST00000480057 MAGEB2O15479 319 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 ASAP2O43150 1006 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 ADCY3O60266 1144 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 NOL4O94818 638 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 NDUFA10O95299 355 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 ANXA13P27216 316 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 GTF2H1P32780 548 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 FMO5P49326 533 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 VAMP7P51809 220 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 KRT83P78385 493 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 POU5F1BQ06416 359 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 CETN1Q12798 172 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 ACVR2BQ13705 512 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 TCERG1LQ5VWI1 586 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 DPY19L2P1Q6NXN4 242 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 TRMT1LQ7Z2T5 733 aaKnown RBP12.02□□□□□ -0.49
VTI1A-204ENST00000480057 REM2Q8IYK8 340 aaPredicted RBP12.02□□□□□ -0.49
VTI1A-204ENST00000480057 TMC2Q8TDI7 906 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 ASAP3Q8TDY4 903 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 USP6NLQ92738 828 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 COPS5Q92905 334 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 EIF3CQ99613 913 aaKnown RBP12.02□□□□□ -0.49
VTI1A-204ENST00000480057 C2orf40Q9H1Z8 148 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 ZNF215Q9UL58 517 aaPredicted RBP12.02□□□□□ -0.49
VTI1A-204ENST00000480057 USP20Q9Y2K6 914 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 ADGRA3Q8IWK6 1321 aa12.02□□□□□ -0.49
VTI1A-204ENST00000480057 LRRC53A6NM62 1247 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 ZBTB42B2RXF5 422 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 EPHB6O15197 1021 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 IPO7O95373 1038 aaKnown RBP12.01□□□□□ -0.49
VTI1A-204ENST00000480057 LCA5LO95447 670 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 ALDH1A1P00352 501 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 LGALS2P05162 132 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 PON1P27169 355 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 ADSSP30520 456 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 RGS2P41220 211 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 ETF1P62495 437 aaKnown RBP12.01□□□□□ -0.49
VTI1A-204ENST00000480057 TFDP1Q14186 410 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 MTF1Q14872 753 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 KLHDC7AQ5VTJ3 777 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 CDCA2Q69YH5 1023 aaPredicted RBP12.01□□□□□ -0.49
VTI1A-204ENST00000480057 ZPBP2Q6X784 338 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 RRAGAQ7L523 313 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 TXLNBQ8N3L3 684 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 KIF18AQ8NI77 898 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 NPLOC4Q8TAT6 608 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 PSPC1Q8WXF1 523 aaKnown RBP12.01□□□□□ -0.49
VTI1A-204ENST00000480057 TMEM143Q96AN5 459 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 MFSD14AQ96MC6 490 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 CHP1Q99653 195 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 CBWD1Q9BRT8 395 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 IKZF4Q9H2S9 585 aa12.01□□□□□ -0.49
VTI1A-204ENST00000480057 AIPL1Q9NZN9 384 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms