RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 SKIP12755 728 aa11.7□□□□□ -0.54
SP140-210ENST00000479539 CLCN6P51797 869 aa11.7□□□□□ -0.54
SP140-210ENST00000479539 CAPSQ13938 189 aa11.7□□□□□ -0.54
SP140-210ENST00000479539 CLLU1OSQ5K130 101 aa11.7□□□□□ -0.54
SP140-210ENST00000479539 KRT79Q5XKE5 535 aa11.7□□□□□ -0.54
SP140-210ENST00000479539 TWF2Q6IBS0 349 aaKnown RBP11.7□□□□□ -0.54
SP140-210ENST00000479539 PADI6Q6TGC4 694 aa11.7□□□□□ -0.54
SP140-210ENST00000479539 LRRC55Q6ZSA7 311 aa11.7□□□□□ -0.54
SP140-210ENST00000479539 SPPL3Q8TCT6 385 aa11.7□□□□□ -0.54
SP140-210ENST00000479539 SNX29Q8TEQ0 813 aa11.7□□□□□ -0.54
SP140-210ENST00000479539 RSPH1Q8WYR4 309 aa11.7□□□□□ -0.54
SP140-210ENST00000479539 FAM212AQ96EL1 285 aa11.7□□□□□ -0.54
SP140-210ENST00000479539 MMTAG2Q9BU76 263 aaKnown RBP11.7□□□□□ -0.54
SP140-210ENST00000479539 POLR3FQ9H1D9 316 aaPredicted RBP11.7□□□□□ -0.54
SP140-210ENST00000479539 CWH43Q9H720 699 aa11.7□□□□□ -0.54
SP140-210ENST00000479539 GPRC5CQ9NQ84 441 aa11.7□□□□□ -0.54
SP140-210ENST00000479539 THEGQ9P2T0 379 aa11.7□□□□□ -0.54
SP140-210ENST00000479539 COG5Q9UP83 839 aa11.7□□□□□ -0.54
SP140-210ENST00000479539 VCANP13611 3396 aa11.7□□□□□ -0.54
SP140-210ENST00000479539 MYH9P35579 1960 aaKnown RBP11.69□□□□□ -0.54
SP140-210ENST00000479539 UNC80Q8N2C7 3258 aa11.69□□□□□ -0.54
SP140-210ENST00000479539 PTPRSQ13332 1948 aa11.69□□□□□ -0.54
SP140-210ENST00000479539 PP2D1A8MPX8 630 aa11.69□□□□□ -0.54
SP140-210ENST00000479539 ITGB1P05556 798 aa11.69□□□□□ -0.54
SP140-210ENST00000479539 SYT1P21579 422 aa11.69□□□□□ -0.54
SP140-210ENST00000479539 CDC25AP30304 524 aa11.69□□□□□ -0.54
SP140-210ENST00000479539 RAB27AP51159 221 aa11.69□□□□□ -0.54
SP140-210ENST00000479539 MRPS5P82675 430 aaKnown RBP11.69□□□□□ -0.54
SP140-210ENST00000479539 MBTD1Q05BQ5 628 aa11.69□□□□□ -0.54
SP140-210ENST00000479539 CAMK1Q14012 370 aa11.69□□□□□ -0.54
SP140-210ENST00000479539 SKIV2LQ15477 1246 aaKnown RBP11.69□□□□□ -0.54
SP140-210ENST00000479539 AMHR2Q16671 573 aa11.69□□□□□ -0.54
SP140-210ENST00000479539 TIGD5Q53EQ6 642 aa11.69□□□□□ -0.54
SP140-210ENST00000479539 HYIQ5T013 277 aa11.69□□□□□ -0.54
SP140-210ENST00000479539 UBXN11Q5T124 520 aa11.69□□□□□ -0.54
SP140-210ENST00000479539 MRPL10Q7Z7H8 261 aaKnown RBP11.69□□□□□ -0.54
SP140-210ENST00000479539 ABI1Q8IZP0 508 aa11.69□□□□□ -0.54
SP140-210ENST00000479539 KCTD17Q8N5Z5 321 aa11.69□□□□□ -0.54
SP140-210ENST00000479539 KLHL23Q8NBE8 558 aa11.69□□□□□ -0.54
SP140-210ENST00000479539 BHMT2Q9H2M3 363 aa11.69□□□□□ -0.54
SP140-210ENST00000479539 ALG13Q9NP73 1137 aaKnown RBP11.69□□□□□ -0.54
SP140-210ENST00000479539 AAASQ9NRG9 546 aa11.69□□□□□ -0.54
SP140-210ENST00000479539 FAM105AQ9NUU6 356 aa11.69□□□□□ -0.54
SP140-210ENST00000479539 DDX19AQ9NUU7 478 aaKnown RBP11.69□□□□□ -0.54
SP140-210ENST00000479539 DNM3Q9UQ16 869 aa11.69□□□□□ -0.54
SP140-210ENST00000479539 SIP14410 1827 aa11.68□□□□□ -0.54
SP140-210ENST00000479539 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.68□□□□□ -0.54
SP140-210ENST00000479539 INO80B-WBP1J3KQ70 363 aa11.68□□□□□ -0.54
SP140-210ENST00000479539 TSPAN1O60635 241 aa11.68□□□□□ -0.54
SP140-210ENST00000479539 EYA4O95677 639 aa11.68□□□□□ -0.54
SP140-210ENST00000479539 BMP15O95972 392 aa11.68□□□□□ -0.54
SP140-210ENST00000479539 DNAJB1P25685 340 aa11.68□□□□□ -0.54
SP140-210ENST00000479539 AXLP30530 894 aa11.68□□□□□ -0.54
SP140-210ENST00000479539 NCBP1Q09161 790 aaKnown RBP11.68□□□□□ -0.54
SP140-210ENST00000479539 COL19A1Q14993 1142 aa11.68□□□□□ -0.54
SP140-210ENST00000479539 CSPP1Q1MSJ5 1256 aa11.68□□□□□ -0.54
SP140-210ENST00000479539 TJAP1Q5JTD0 557 aa11.68□□□□□ -0.54
SP140-210ENST00000479539 SPOUT1Q5T280 376 aaKnown RBP11.68□□□□□ -0.54
SP140-210ENST00000479539 MAEAQ7L5Y9 396 aa11.68□□□□□ -0.54
SP140-210ENST00000479539 LRRC43Q8N309 656 aa11.68□□□□□ -0.54
SP140-210ENST00000479539 COLGALT1Q8NBJ5 622 aa11.68□□□□□ -0.54
SP140-210ENST00000479539 RNF169Q8NCN4 708 aa11.68□□□□□ -0.54
SP140-210ENST00000479539 HLA-CQ95604 372 aa11.68□□□□□ -0.54
SP140-210ENST00000479539 CCDC51Q96ER9 411 aa11.68□□□□□ -0.54
SP140-210ENST00000479539 ASB2Q96Q27 587 aa11.68□□□□□ -0.54
SP140-210ENST00000479539 NSUN3Q9H649 340 aaKnown RBP11.68□□□□□ -0.54
SP140-210ENST00000479539 HCSTQ9UBK5 93 aa11.68□□□□□ -0.54
SP140-210ENST00000479539 PCDHB2Q9Y5E7 798 aa11.68□□□□□ -0.54
SP140-210ENST00000479539 PCDHB12Q9Y5F1 795 aa11.68□□□□□ -0.54
SP140-210ENST00000479539 TRANK1O15050 2925 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 EVPLQ92817 2033 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 VPS37CA5D8V6 355 aaPredicted RBP11.67□□□□□ -0.54
SP140-210ENST00000479539 VWA3AA6NCI4 1184 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 E9PMD0 336 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 SLC26A4O43511 780 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 OFD1O75665 1012 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 ERLIN2O94905 339 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 LAG3P18627 525 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 NAMPTP43490 491 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 PLCB3Q01970 1234 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 UBE3AQ05086 875 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 RESTQ13127 1097 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 TCEAL5Q5H9L2 206 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 CDCA2Q69YH5 1023 aaPredicted RBP11.67□□□□□ -0.54
SP140-210ENST00000479539 KCNK18Q7Z418 384 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 HELQQ8TDG4 1101 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 POF1BQ8WVV4 589 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 BSNDQ8WZ55 320 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 KIFAP3Q92845 792 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 PGBD4Q96DM1 585 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 AK8Q96MA6 479 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 PNMA5Q96PV4 448 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 MRPL9Q9BYD2 267 aaKnown RBP11.67□□□□□ -0.54
SP140-210ENST00000479539 FZD8Q9H461 694 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 MTMR6Q9Y217 621 aa11.67□□□□□ -0.54
SP140-210ENST00000479539 GBF1Q92538 1859 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 A0A1B0GUA9 196 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 LRRIQ4A6NIV6 560 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 MEIS3P2A8K0S8 358 aa11.66□□□□□ -0.54
SP140-210ENST00000479539 DLL1O00548 723 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms