RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 POC1B-GALNT4F8VUJ3 575 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 SLCO1A2P46721 670 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 SCARA5Q6ZMJ2 495 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 SESTD1Q86VW0 696 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 APOL6Q9BWW8 343 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 PLAAQ9Y263 795 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 FHOD1Q9Y613 1164 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 DDTLA6NHG4 134 aaPredicted RBP15.37■□□□□ 0.05
COL20A1-206ENST00000479501 CHUKO15111 745 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 MSH4O15457 936 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 MED7O43513 233 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 TRIP13Q15645 432 aaPredicted RBP15.37■□□□□ 0.05
COL20A1-206ENST00000479501 ZNF394Q53GI3 561 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 FAM47CQ5HY64 1035 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 KSR1Q8IVT5 923 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 FBXL13Q8NEE6 735 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 FAM167AQ96KS9 214 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 STK33Q9BYT3 514 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 ZNF302Q9NR11 478 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 TFR2Q9UP52 801 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 SCINQ9Y6U3 715 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 MRC1P22897 1456 aa15.37■□□□□ 0.05
COL20A1-206ENST00000479501 BAG2O95816 211 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 RFC1P35251 1148 aaPredicted RBP15.36■□□□□ 0.05
COL20A1-206ENST00000479501 PDCLQ13371 301 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 ACER1Q8TDN7 264 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 RPF1Q9H9Y2 349 aaKnown RBP15.36■□□□□ 0.05
COL20A1-206ENST00000479501 SPC25Q9HBM1 224 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 CAPN9O14815 690 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 ZBTB22O15209 634 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 ZRANB2O95218 330 aaKnown RBP eCLIP15.36■□□□□ 0.05
COL20A1-206ENST00000479501 TMEM270Q6UE05 265 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 MOXD1Q6UVY6 613 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 DNAJC7Q99615 494 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 MTRQ99707 1265 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 POLR3CQ9BUI4 534 aaPredicted RBP15.36■□□□□ 0.05
COL20A1-206ENST00000479501 FBXO28Q9NVF7 368 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 RASGRF2O14827 1237 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 PPP2R5DQ14738 602 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 COG2Q14746 738 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 TRIM50Q86XT4 487 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 MXRA8Q9BRK3 442 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 APEX2Q9UBZ4 518 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 CD2APQ9Y5K6 639 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 OPHN1O60890 802 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 MED24O75448 989 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 ANXA13P27216 316 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 ERICH1Q86X53 443 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 RFX6Q8HWS3 928 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 ZNF710Q8N1W2 664 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 CEP120Q8N960 986 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 NOA1Q8NC60 698 aaKnown RBP15.36■□□□□ 0.05
COL20A1-206ENST00000479501 PROCA1Q8NCQ7 364 aaPredicted RBP15.36■□□□□ 0.05
COL20A1-206ENST00000479501 CFAP61Q8NHU2 1237 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 ZNF564Q8TBZ8 553 aaPredicted RBP15.36■□□□□ 0.05
COL20A1-206ENST00000479501 NUF2Q9BZD4 464 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 POLR3FQ9H1D9 316 aaPredicted RBP15.36■□□□□ 0.05
COL20A1-206ENST00000479501 SEMA6BQ9H3T3 888 aa15.36■□□□□ 0.05
COL20A1-206ENST00000479501 VEGFAP15692 232 aaPredicted RBP15.35■□□□□ 0.05
COL20A1-206ENST00000479501 ECE1P42892 770 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 SH3BGRP55822 239 aaPredicted RBP15.35■□□□□ 0.05
COL20A1-206ENST00000479501 MICALL2Q8IY33 904 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 RNF169Q8NCN4 708 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 PSPC1Q8WXF1 523 aaKnown RBP15.35■□□□□ 0.05
COL20A1-206ENST00000479501 CALR3Q96L12 384 aaKnown RBP15.35■□□□□ 0.05
COL20A1-206ENST00000479501 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.35■□□□□ 0.05
COL20A1-206ENST00000479501 SLC9A2Q9UBY0 812 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 CNOT7Q9UIV1 285 aaKnown RBP15.35■□□□□ 0.05
COL20A1-206ENST00000479501 ARHGAP42A6NI28 874 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 XPOTO43592 962 aaKnown RBP15.35■□□□□ 0.05
COL20A1-206ENST00000479501 EVI5O60447 810 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 SHMT1P34896 483 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 GALCP54803 685 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 MDM2Q00987 491 aaPredicted RBP15.35■□□□□ 0.05
COL20A1-206ENST00000479501 TMEM35BQ8NCS4 154 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 AGBL1Q96MI9 1066 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 PPP1R16BQ96T49 567 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 TIPINQ9BVW5 301 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 CALN1Q9BXU9 219 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 NOC2LQ9Y3T9 749 aaKnown RBP15.35■□□□□ 0.05
COL20A1-206ENST00000479501 NR3C2P08235 984 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 DYNLT1P63172 113 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 ZKSCAN8Q15776 578 aaPredicted RBP15.35■□□□□ 0.05
COL20A1-206ENST00000479501 FIGNQ5HY92 759 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 CYFIP1Q7L576 1253 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 NLRP7Q8WX94 980 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 AGPAT1Q99943 283 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 C11orf70Q9BRQ4 267 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 MED10Q9BTT4 135 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 MKNK1Q9BUB5 465 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 TEX13BQ9BXU2 312 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 TRIM4Q9C037 500 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 TAF1DQ9H5J8 278 aaPredicted RBP15.35■□□□□ 0.05
COL20A1-206ENST00000479501 JPH1Q9HDC5 661 aaPredicted RBP15.35■□□□□ 0.05
COL20A1-206ENST00000479501 HSPBP1Q9NZL4 362 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 SCAF8Q9UPN6 1271 aaKnown RBP15.35■□□□□ 0.05
COL20A1-206ENST00000479501 PFASO15067 1338 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 PLEKP08567 350 aaPredicted RBP15.35■□□□□ 0.05
COL20A1-206ENST00000479501 ZNF667Q5HYK9 610 aa15.35■□□□□ 0.05
COL20A1-206ENST00000479501 NUP85Q9BW27 656 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms