RNA–Protein interactions for RNA: ENST00000479487.1

ATRX-205, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 408 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-205ENST00000479487 ARID4BQ4LE39 1312 aaPredicted RBP3.67□□□□□ -1.82
ATRX-205ENST00000479487 WDR33Q9C0J8 1336 aaKnown RBP3.67□□□□□ -1.82
ATRX-205ENST00000479487 TCOF1Q13428 1488 aaKnown RBP3.67□□□□□ -1.82
ATRX-205ENST00000479487 MBD5Q9P267 1494 aa3.67□□□□□ -1.82
ATRX-205ENST00000479487 ZMYM3Q14202 1370 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 ARHGEF11O15085 1522 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 UGGT2Q9NYU1 1516 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 A0A0A6YYJ9 748 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 MAFGO15525 162 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 BRINP1O60477 761 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 FRAT2O75474 233 aaPredicted RBP3.66□□□□□ -1.82
ATRX-205ENST00000479487 FKBP9O95302 570 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 HMGCRP04035 888 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 ZNF888P0CJ79 500 aaPredicted RBP3.66□□□□□ -1.82
ATRX-205ENST00000479487 NCLP19338 710 aaKnown RBP3.66□□□□□ -1.82
ATRX-205ENST00000479487 LSP1P33241 339 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 RGS19P49795 217 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 TERF1P54274 439 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 SLC6A3Q01959 620 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 HGFACQ04756 655 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 BECN1Q14457 450 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 ICAM4Q14773 271 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 MYBPC3Q14896 1274 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 SART3Q15020 963 aaKnown RBP3.66□□□□□ -1.82
ATRX-205ENST00000479487 CCDC184Q52MB2 194 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 AGBL4Q5VU57 503 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 KIAA1841Q6NSI8 718 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 ZNF585AQ6P3V2 769 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 FKBP9P1Q75LS8 142 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 MTERF4Q7Z6M4 381 aaKnown RBP3.66□□□□□ -1.82
ATRX-205ENST00000479487 NXPE1Q8N323 547 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 C7orf31Q8N865 590 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 GIMAP8Q8ND71 665 aaPredicted RBP3.66□□□□□ -1.82
ATRX-205ENST00000479487 OR5AN1Q8NGI8 311 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 WDR48Q8TAF3 677 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 CHAC2Q8WUX2 184 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 OSBPL6Q9BZF3 934 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 PCED1AQ9H1Q7 454 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 OR10A2Q9H208 303 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 IFT22Q9H7X7 185 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 EMC7Q9NPA0 242 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 THG1LQ9NWX6 298 aaKnown RBP3.66□□□□□ -1.82
ATRX-205ENST00000479487 H2AFY2Q9P0M6 372 aaPredicted RBP3.66□□□□□ -1.82
ATRX-205ENST00000479487 HS3ST3A1Q9Y663 406 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 BLMP54132 1417 aaPredicted RBP3.66□□□□□ -1.82
ATRX-205ENST00000479487 SNAPC4Q5SXM2 1469 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 ATAD2BQ9ULI0 1458 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 SHROOM2Q13796 1616 aa3.66□□□□□ -1.82
ATRX-205ENST00000479487 ITSN2Q9NZM3 1697 aa3.65□□□□□ -1.82
ATRX-205ENST00000479487 HMGXB3Q12766 1538 aa3.65□□□□□ -1.82
ATRX-205ENST00000479487 ARHGEF12Q9NZN5 1544 aa3.65□□□□□ -1.82
ATRX-205ENST00000479487 EIF3AQ14152 1382 aaKnown RBP3.65□□□□□ -1.82
ATRX-205ENST00000479487 KIF15Q9NS87 1388 aa3.65□□□□□ -1.82
ATRX-205ENST00000479487 PLXNC1O60486 1568 aa3.65□□□□□ -1.82
ATRX-205ENST00000479487 SAMD9Q5K651 1589 aa3.65□□□□□ -1.82
ATRX-205ENST00000479487 FSD2A1L4K1 749 aa3.65□□□□□ -1.83
ATRX-205ENST00000479487 GOLGA6L3A6NEY3 463 aa3.65□□□□□ -1.83
ATRX-205ENST00000479487 ARHGAP6O43182 974 aa3.65□□□□□ -1.83
ATRX-205ENST00000479487 EYA4O95677 639 aa3.65□□□□□ -1.83
ATRX-205ENST00000479487 GPR15P49685 360 aa3.65□□□□□ -1.83
ATRX-205ENST00000479487 RGS3P49796 1198 aa3.65□□□□□ -1.83
ATRX-205ENST00000479487 MRE11P49959 708 aa3.65□□□□□ -1.83
ATRX-205ENST00000479487 ABHD18Q0P651 414 aa3.65□□□□□ -1.83
ATRX-205ENST00000479487 DUSP8Q13202 625 aa3.65□□□□□ -1.83
ATRX-205ENST00000479487 DGKDQ16760 1214 aa3.65□□□□□ -1.83
ATRX-205ENST00000479487 CCDC178Q5BJE1 867 aa3.65□□□□□ -1.83
ATRX-205ENST00000479487 TIGD7Q6NT04 549 aaPredicted RBP3.65□□□□□ -1.83
ATRX-205ENST00000479487 LARP4Q71RC2 724 aaKnown RBP eCLIP3.65□□□□□ -1.83
ATRX-205ENST00000479487 DDX46Q7L014 1031 aaKnown RBP3.65□□□□□ -1.83
ATRX-205ENST00000479487 CENPQQ7L2Z9 268 aaPredicted RBP3.65□□□□□ -1.83
ATRX-205ENST00000479487 OTOP2Q7RTS6 562 aa3.65□□□□□ -1.83
ATRX-205ENST00000479487 C11orf74Q86VG3 221 aa3.65□□□□□ -1.83
ATRX-205ENST00000479487 SMAP1Q8IYB5 467 aaPredicted RBP3.65□□□□□ -1.83
ATRX-205ENST00000479487 EXOC6Q8TAG9 804 aa3.65□□□□□ -1.83
ATRX-205ENST00000479487 RSAD2Q8WXG1 361 aa3.65□□□□□ -1.83
ATRX-205ENST00000479487 CFHR4Q92496 578 aa3.65□□□□□ -1.83
ATRX-205ENST00000479487 RPGRQ92834 1020 aaKnown RBP3.65□□□□□ -1.83
ATRX-205ENST00000479487 PUS7Q96PZ0 661 aaKnown RBP3.65□□□□□ -1.83
ATRX-205ENST00000479487 SCAND2PQ9GZW5 306 aaPredicted RBP3.65□□□□□ -1.83
ATRX-205ENST00000479487 TOMM22Q9NS69 142 aa3.65□□□□□ -1.83
ATRX-205ENST00000479487 SPTLC3Q9NUV7 552 aa3.65□□□□□ -1.83
ATRX-205ENST00000479487 RCAN3Q9UKA8 241 aa3.65□□□□□ -1.83
ATRX-205ENST00000479487 CTDP1Q9Y5B0 961 aaPredicted RBP3.65□□□□□ -1.83
ATRX-205ENST00000479487 DENND4BO75064 1496 aaPredicted RBP3.65□□□□□ -1.83
ATRX-205ENST00000479487 RALGAPBQ86X10 1494 aa3.65□□□□□ -1.83
ATRX-205ENST00000479487 KIF7Q2M1P5 1343 aa3.65□□□□□ -1.83
ATRX-205ENST00000479487 LAMC1P11047 1609 aa3.64□□□□□ -1.83
ATRX-205ENST00000479487 DNMT1P26358 1616 aaKnown RBP3.64□□□□□ -1.83
ATRX-205ENST00000479487 A0A0U1RQG5 324 aaPredicted RBP3.64□□□□□ -1.83
ATRX-205ENST00000479487 K7ESF4 209 aa3.64□□□□□ -1.83
ATRX-205ENST00000479487 MATN2O00339 956 aa3.64□□□□□ -1.83
ATRX-205ENST00000479487 GPR42O15529 346 aa3.64□□□□□ -1.83
ATRX-205ENST00000479487 PPFIA2O75334 1257 aa3.64□□□□□ -1.83
ATRX-205ENST00000479487 ULK1O75385 1050 aa3.64□□□□□ -1.83
ATRX-205ENST00000479487 PRPF6O94906 941 aaKnown RBP3.64□□□□□ -1.83
ATRX-205ENST00000479487 SLPIP03973 132 aa3.64□□□□□ -1.83
ATRX-205ENST00000479487 PFKMP08237 780 aa3.64□□□□□ -1.83
ATRX-205ENST00000479487 MCM7P33993 719 aa3.64□□□□□ -1.83
ATRX-205ENST00000479487 ADCY8P40145 1251 aa3.64□□□□□ -1.83
ATRX-205ENST00000479487 ADCY2Q08462 1091 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms