RNA–Protein interactions for RNA: ENST00000478890.5

SRRM1-211, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-211ENST00000478890 MAML3Q96JK9 1138 aa2.1□□□□□ -2.07
SRRM1-211ENST00000478890 NOL10Q9BSC4 688 aaKnown RBP2.1□□□□□ -2.07
SRRM1-211ENST00000478890 KRTAP2-2Q9BYT5 123 aa2.1□□□□□ -2.07
SRRM1-211ENST00000478890 POFUT1Q9H488 388 aa2.1□□□□□ -2.07
SRRM1-211ENST00000478890 MTG2Q9H4K7 406 aa2.1□□□□□ -2.07
SRRM1-211ENST00000478890 AGO3Q9H9G7 860 aaKnown RBP2.1□□□□□ -2.07
SRRM1-211ENST00000478890 TRIM39Q9HCM9 518 aa2.1□□□□□ -2.07
SRRM1-211ENST00000478890 IGSF5Q9NSI5 407 aa2.1□□□□□ -2.07
SRRM1-211ENST00000478890 EIF2B4Q9UI10 523 aaKnown RBP2.1□□□□□ -2.07
SRRM1-211ENST00000478890 SORCS3Q9UPU3 1222 aa2.1□□□□□ -2.07
SRRM1-211ENST00000478890 HDAC5Q9UQL6 1122 aa2.1□□□□□ -2.07
SRRM1-211ENST00000478890 SALL3Q9BXA9 1300 aa2.1□□□□□ -2.07
SRRM1-211ENST00000478890 KRTAP23-1A1A580 65 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 PMS2P1A4D2B8 440 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 NRP1O14786 923 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 KPNA6O60684 536 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 MAFO75444 373 aaPredicted RBP2.09□□□□□ -2.07
SRRM1-211ENST00000478890 FSBPO95073 299 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 SCAF4O95104 1147 aaKnown RBP2.09□□□□□ -2.07
SRRM1-211ENST00000478890 PCDH8O95206 1070 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 ASMTLO95671 621 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 ZBTB48P10074 688 aaPredicted RBP2.09□□□□□ -2.07
SRRM1-211ENST00000478890 GYPEP15421 78 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 XPAP23025 273 aaPredicted RBP2.09□□□□□ -2.07
SRRM1-211ENST00000478890 CD40P25942 277 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 ADCY1Q08828 1119 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 MYBPC3Q14896 1274 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 PTPAQ15257 358 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 EPHA7Q15375 998 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 GAGE13Q4V321 117 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 SPTY2D1Q68D10 685 aaPredicted RBP2.09□□□□□ -2.07
SRRM1-211ENST00000478890 OTOP1Q7RTM1 612 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 ZZZ3Q8IYH5 903 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 ZNF276Q8N554 614 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 OR5M3Q8NGP4 307 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 CPT1CQ8TCG5 803 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 PROKR1Q8TCW9 393 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 SH3TC2Q8TF17 1288 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 ST8SIA2Q92186 375 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 RTF1Q92541 710 aaKnown RBP2.09□□□□□ -2.07
SRRM1-211ENST00000478890 LARP4BQ92615 738 aaKnown RBP2.09□□□□□ -2.07
SRRM1-211ENST00000478890 HAS1Q92839 578 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 ZNF512Q96ME7 567 aaPredicted RBP2.09□□□□□ -2.07
SRRM1-211ENST00000478890 GPHA2Q96T91 129 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 ELF4Q99607 663 aaPredicted RBP2.09□□□□□ -2.07
SRRM1-211ENST00000478890 PRRX2Q99811 253 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 CPPED1Q9BRF8 314 aaPredicted RBP2.09□□□□□ -2.07
SRRM1-211ENST00000478890 MYL10Q9BUA6 226 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 ZSWIM4Q9H7M6 989 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 IFT57Q9NWB7 429 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 CEP72Q9P209 647 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 USP18Q9UMW8 372 aa2.09□□□□□ -2.07
SRRM1-211ENST00000478890 CDK11AQ9UQ88 783 aaPredicted RBP2.09□□□□□ -2.07
SRRM1-211ENST00000478890 C2orf78A6NCI8 922 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 CBX4O00257 560 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 TRAF5O00463 557 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 DVL2O14641 736 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 OPHN1O60890 802 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 RAB11FIP3O75154 756 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 PPFIA4O75335 1185 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 DNAJC8O75937 253 aaPredicted RBP2.08□□□□□ -2.08
SRRM1-211ENST00000478890 PRPF6O94906 941 aaKnown RBP2.08□□□□□ -2.08
SRRM1-211ENST00000478890 ABHD16AO95870 558 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 PEX11BO96011 259 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 KCNA6P17658 529 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 BMP5P22003 454 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 KIR2DL3P43628 341 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 KPNA1P52294 538 aaPredicted RBP2.08□□□□□ -2.08
SRRM1-211ENST00000478890 ANTXR2P58335 489 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 IL2P60568 153 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 DUSP2Q05923 314 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 RBL2Q08999 1139 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 SPIDRQ14159 915 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 FAM214AQ32MH5 1076 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 TIGD2Q4W5G0 525 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 FNDC3BQ53EP0 1204 aaKnown RBP2.08□□□□□ -2.08
SRRM1-211ENST00000478890 RABL3Q5HYI8 236 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 LY6G5CQ5SRR4 150 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 FNDC7Q5VTL7 733 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 CDCA2Q69YH5 1023 aaPredicted RBP2.08□□□□□ -2.08
SRRM1-211ENST00000478890 LAIR1Q6GTX8 287 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 KIAA1841Q6NSI8 718 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 CNNM4Q6P4Q7 775 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 LMBR1LQ6UX01 489 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 ESPNLQ6ZVH7 1005 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 MICALCLQ6ZW33 695 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 CLEC14AQ86T13 490 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 C11orf74Q86VG3 221 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 LDLRAD3Q86YD5 345 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 CMTM4Q8IZR5 234 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 BCL6BQ8N143 479 aaPredicted RBP2.08□□□□□ -2.08
SRRM1-211ENST00000478890 LILRB2Q8N423 598 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 SREK1Q8WXA9 508 aaKnown RBP2.08□□□□□ -2.08
SRRM1-211ENST00000478890 CLUHP3Q96NS8 147 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 MNTQ99583 582 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 ZNF703Q9H7S9 590 aaPredicted RBP2.08□□□□□ -2.08
SRRM1-211ENST00000478890 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.08□□□□□ -2.081e-6■■■■■ 31.8
SRRM1-211ENST00000478890 CYP4F11Q9HBI6 524 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 OXSMQ9NWU1 459 aa2.08□□□□□ -2.08
SRRM1-211ENST00000478890 THG1LQ9NWX6 298 aaKnown RBP2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms