RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 RNF135Q8IUD6 432 aa16.14■□□□□ 0.17
SMARCE1-209ENST00000478349 SLC39A11Q8N1S5 342 aa16.14■□□□□ 0.17
SMARCE1-209ENST00000478349 GTF3C6Q969F1 213 aa16.14■□□□□ 0.17
SMARCE1-209ENST00000478349 CEP89Q96ST8 783 aa16.14■□□□□ 0.17
SMARCE1-209ENST00000478349 DHX33Q9H6R0 707 aaKnown RBP16.14■□□□□ 0.17
SMARCE1-209ENST00000478349 AGPAT5Q9NUQ2 364 aa16.14■□□□□ 0.17
SMARCE1-209ENST00000478349 FAM105AQ9NUU6 356 aa16.14■□□□□ 0.17
SMARCE1-209ENST00000478349 RNF19AQ9NV58 838 aa16.14■□□□□ 0.17
SMARCE1-209ENST00000478349 HCSTQ9UBK5 93 aa16.14■□□□□ 0.17
SMARCE1-209ENST00000478349 PCDHGC5Q9Y5F6 944 aa16.14■□□□□ 0.17
SMARCE1-209ENST00000478349 CNTNAP2Q9UHC6 1331 aa16.14■□□□□ 0.17
SMARCE1-209ENST00000478349 TMEM150BA6NC51 233 aa16.13■□□□□ 0.17
SMARCE1-209ENST00000478349 EML1O00423 815 aa16.13■□□□□ 0.17
SMARCE1-209ENST00000478349 ZNF623O75123 536 aa16.13■□□□□ 0.17
SMARCE1-209ENST00000478349 ERLIN2O94905 339 aa16.13■□□□□ 0.17
SMARCE1-209ENST00000478349 TECP42680 631 aa16.13■□□□□ 0.17
SMARCE1-209ENST00000478349 BCAR1P56945 870 aa16.13■□□□□ 0.17
SMARCE1-209ENST00000478349 MXD4Q14582 209 aaPredicted RBP16.13■□□□□ 0.17
SMARCE1-209ENST00000478349 CBX2Q14781 532 aaPredicted RBP16.13■□□□□ 0.17
SMARCE1-209ENST00000478349 EMC2Q15006 297 aa16.13■□□□□ 0.17
SMARCE1-209ENST00000478349 NOMO2Q5JPE7 1267 aa16.13■□□□□ 0.17
SMARCE1-209ENST00000478349 CES5AQ6NT32 575 aa16.13■□□□□ 0.17
SMARCE1-209ENST00000478349 ANKRD54Q6NXT1 300 aa16.13■□□□□ 0.17
SMARCE1-209ENST00000478349 CNNM3Q8NE01 707 aa16.13■□□□□ 0.17
SMARCE1-209ENST00000478349 NECTIN4Q96NY8 510 aa16.13■□□□□ 0.17
SMARCE1-209ENST00000478349 MTRQ99707 1265 aa16.13■□□□□ 0.17
SMARCE1-209ENST00000478349 SH2D3AQ9BRG2 576 aa16.13■□□□□ 0.17
SMARCE1-209ENST00000478349 UBN1Q9NPG3 1134 aa16.13■□□□□ 0.17
SMARCE1-209ENST00000478349 KANSL3Q9P2N6 904 aa16.13■□□□□ 0.17
SMARCE1-209ENST00000478349 MUTYHQ9UIF7 546 aa16.13■□□□□ 0.17
SMARCE1-209ENST00000478349 LOC730098B7Z3J9 87 aa16.12■□□□□ 0.17
SMARCE1-209ENST00000478349 CSDE1O75534 798 aaKnown RBP16.12■□□□□ 0.17
SMARCE1-209ENST00000478349 ITIH3Q06033 890 aa16.12■□□□□ 0.17
SMARCE1-209ENST00000478349 SAFBQ15424 915 aaKnown RBP eCLIP16.12■□□□□ 0.17
SMARCE1-209ENST00000478349 CALCRLQ16602 461 aa16.12■□□□□ 0.17
SMARCE1-209ENST00000478349 XKR9Q5GH70 373 aa16.12■□□□□ 0.17
SMARCE1-209ENST00000478349 HACE1Q8IYU2 909 aa16.12■□□□□ 0.17
SMARCE1-209ENST00000478349 MRPL43Q8N983 215 aaKnown RBP16.12■□□□□ 0.17
SMARCE1-209ENST00000478349 PRPF31Q8WWY3 499 aaKnown RBP16.12■□□□□ 0.17
SMARCE1-209ENST00000478349 CCDC51Q96ER9 411 aa16.12■□□□□ 0.17
SMARCE1-209ENST00000478349 DZANK1Q9NVP4 752 aa16.12■□□□□ 0.17
SMARCE1-209ENST00000478349 PCDHA12Q9UN75 941 aa16.12■□□□□ 0.17
SMARCE1-209ENST00000478349 INPP5FQ9Y2H2 1132 aa16.12■□□□□ 0.17
SMARCE1-209ENST00000478349 NR2E1Q9Y466 385 aa16.12■□□□□ 0.17
SMARCE1-209ENST00000478349 KIAA1671Q9BY89 1806 aa16.11■□□□□ 0.17
SMARCE1-209ENST00000478349 NEMFO60524 1076 aa16.11■□□□□ 0.17
SMARCE1-209ENST00000478349 SRGAP2CP0DJJ0 459 aa16.11■□□□□ 0.17
SMARCE1-209ENST00000478349 AXLP30530 894 aa16.11■□□□□ 0.17
SMARCE1-209ENST00000478349 PBX3P40426 434 aa16.11■□□□□ 0.17
SMARCE1-209ENST00000478349 NPEPPSP55786 919 aa16.11■□□□□ 0.17
SMARCE1-209ENST00000478349 LAMTOR4Q0VGL1 99 aa16.11■□□□□ 0.17
SMARCE1-209ENST00000478349 LLGL2Q6P1M3 1020 aa16.11■□□□□ 0.17
SMARCE1-209ENST00000478349 TPH2Q8IWU9 490 aa16.11■□□□□ 0.17
SMARCE1-209ENST00000478349 RNF149Q8NC42 400 aa16.11■□□□□ 0.17
SMARCE1-209ENST00000478349 OXER1Q8TDS5 423 aa16.11■□□□□ 0.17
SMARCE1-209ENST00000478349 SUSD6Q92537 303 aa16.11■□□□□ 0.17
SMARCE1-209ENST00000478349 EDAQ92838 391 aa16.11■□□□□ 0.17
SMARCE1-209ENST00000478349 HAS1Q92839 578 aa16.11■□□□□ 0.17
SMARCE1-209ENST00000478349 RPGRIP1Q96KN7 1286 aa16.11■□□□□ 0.17
SMARCE1-209ENST00000478349 FAM193BQ96PV7 902 aaPredicted RBP16.11■□□□□ 0.17
SMARCE1-209ENST00000478349 RSAD1Q9HA92 442 aa16.11■□□□□ 0.17
SMARCE1-209ENST00000478349 IFT122Q9HBG6 1241 aa16.11■□□□□ 0.17
SMARCE1-209ENST00000478349 PCDHB2Q9Y5E7 798 aa16.11■□□□□ 0.17
SMARCE1-209ENST00000478349 MYO7AQ13402 2215 aa16.1■□□□□ 0.17
SMARCE1-209ENST00000478349 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.1■□□□□ 0.17
SMARCE1-209ENST00000478349 C2orf71A6NGG8 1288 aa16.1■□□□□ 0.17
SMARCE1-209ENST00000478349 HIDE1A8MVS5 230 aa16.1■□□□□ 0.17
SMARCE1-209ENST00000478349 DGAT1O75907 488 aa16.1■□□□□ 0.17
SMARCE1-209ENST00000478349 LYPLA2O95372 231 aa16.1■□□□□ 0.17
SMARCE1-209ENST00000478349 NEK4P51957 841 aa16.1■□□□□ 0.17
SMARCE1-209ENST00000478349 CYP4A11Q02928 519 aa16.1■□□□□ 0.17
SMARCE1-209ENST00000478349 NOTUMQ6P988 496 aa16.1■□□□□ 0.17
SMARCE1-209ENST00000478349 ELMSAN1Q6PJG2 1045 aa16.1■□□□□ 0.17
SMARCE1-209ENST00000478349 ZBTB33Q86T24 672 aa16.1■□□□□ 0.17
SMARCE1-209ENST00000478349 DDX53Q86TM3 631 aaKnown RBP16.1■□□□□ 0.17
SMARCE1-209ENST00000478349 PPFIBP1Q86W92 1011 aa16.1■□□□□ 0.17
SMARCE1-209ENST00000478349 KSR1Q8IVT5 923 aa16.1■□□□□ 0.17
SMARCE1-209ENST00000478349 DIS3L2Q8IYB7 885 aaKnown RBP16.1■□□□□ 0.17
SMARCE1-209ENST00000478349 VPS52Q8N1B4 723 aa16.1■□□□□ 0.17
SMARCE1-209ENST00000478349 TMEM143Q96AN5 459 aa16.1■□□□□ 0.17
SMARCE1-209ENST00000478349 DYDC2Q96IM9 177 aa16.1■□□□□ 0.17
SMARCE1-209ENST00000478349 RIPOR3Q96MK2 946 aa16.1■□□□□ 0.17
SMARCE1-209ENST00000478349 ANKEF1Q9NU02 776 aa16.1■□□□□ 0.17
SMARCE1-209ENST00000478349 TBC1D13Q9NVG8 400 aa16.1■□□□□ 0.17
SMARCE1-209ENST00000478349 FNDC1Q4ZHG4 1894 aaPredicted RBP16.1■□□□□ 0.17
SMARCE1-209ENST00000478349 SPDYE4A6NLX3 237 aa16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 NR1I2O75469 434 aa16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 CTDNEP1O95476 244 aa16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 MTHFRP42898 656 aa16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 POU5F1BQ06416 359 aa16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 SPIRE1Q08AE8 756 aa16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 NR5A1Q13285 461 aa16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 KCNC3Q14003 757 aa16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 CTTNQ14247 550 aaKnown RBP16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 ME3Q16798 604 aa16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 FERMT3Q86UX7 667 aa16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 SUGP1Q8IWZ8 645 aaKnown RBP16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 VN1R2Q8NFZ6 395 aa16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 LPPQ93052 612 aa16.09■□□□□ 0.17
SMARCE1-209ENST00000478349 IGSF21Q96ID5 467 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms