RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 SLC46A2Q9BY10 475 aa5.29□□□□□ -1.56
NCKAP1-204ENST00000477988 NDOR1Q9UHB4 597 aa5.29□□□□□ -1.56
NCKAP1-204ENST00000477988 PFDN2Q9UHV9 154 aa5.29□□□□□ -1.56
NCKAP1-204ENST00000477988 UBA6A0AVT1 1052 aaPredicted RBP5.28□□□□□ -1.56
NCKAP1-204ENST00000477988 SCAF4O95104 1147 aaKnown RBP5.28□□□□□ -1.56
NCKAP1-204ENST00000477988 CTGFP29279 349 aa5.28□□□□□ -1.56
NCKAP1-204ENST00000477988 BCAR1P56945 870 aa5.28□□□□□ -1.56
NCKAP1-204ENST00000477988 TMEM177Q53S58 311 aa5.28□□□□□ -1.56
NCKAP1-204ENST00000477988 TTC38Q5R3I4 469 aa5.28□□□□□ -1.56
NCKAP1-204ENST00000477988 Q6YL49 198 aa5.28□□□□□ -1.56
NCKAP1-204ENST00000477988 CXorf67Q86X51 503 aaPredicted RBP5.28□□□□□ -1.56
NCKAP1-204ENST00000477988 CKAP2LQ8IYA6 745 aa5.28□□□□□ -1.56
NCKAP1-204ENST00000477988 SYNPO2Q9UMS6 1093 aa5.28□□□□□ -1.56
NCKAP1-204ENST00000477988 MAFGO15525 162 aa5.27□□□□□ -1.57
NCKAP1-204ENST00000477988 KCNA6P17658 529 aa5.27□□□□□ -1.57
NCKAP1-204ENST00000477988 ZFP36P26651 326 aaKnown RBP5.27□□□□□ -1.57
NCKAP1-204ENST00000477988 ZEB1P37275 1124 aaPredicted RBP5.27□□□□□ -1.57
NCKAP1-204ENST00000477988 MAN2A1Q16706 1144 aa5.27□□□□□ -1.57
NCKAP1-204ENST00000477988 NME9Q86XW9 330 aa5.27□□□□□ -1.57
NCKAP1-204ENST00000477988 SUPT20HQ8NEM7 779 aa5.27□□□□□ -1.57
NCKAP1-204ENST00000477988 NELL1Q92832 810 aa5.27□□□□□ -1.57
NCKAP1-204ENST00000477988 RPGRQ92834 1020 aaKnown RBP5.27□□□□□ -1.57
NCKAP1-204ENST00000477988 KRTAP1-5Q9BYS1 174 aa5.27□□□□□ -1.57
NCKAP1-204ENST00000477988 OSBPL6Q9BZF3 934 aa5.27□□□□□ -1.57
NCKAP1-204ENST00000477988 KCNH6Q9H252 994 aa5.27□□□□□ -1.57
NCKAP1-204ENST00000477988 ACSS2Q9NR19 701 aa5.27□□□□□ -1.57
NCKAP1-204ENST00000477988 NCDNQ9UBB6 729 aa5.27□□□□□ -1.57
NCKAP1-204ENST00000477988 CENPVL1A0A0U1RR11 272 aa5.26□□□□□ -1.57
NCKAP1-204ENST00000477988 TMEM200CA6NKL6 621 aa5.26□□□□□ -1.57
NCKAP1-204ENST00000477988 KCNQ2O43526 872 aa5.26□□□□□ -1.57
NCKAP1-204ENST00000477988 DIAPH1O60610 1272 aaKnown RBP5.26□□□□□ -1.57
NCKAP1-204ENST00000477988 HK1P19367 917 aa5.26□□□□□ -1.57
NCKAP1-204ENST00000477988 AVPR1BP47901 424 aa5.26□□□□□ -1.57
NCKAP1-204ENST00000477988 SCLYQ96I15 445 aa5.26□□□□□ -1.57
NCKAP1-204ENST00000477988 SERHL2Q9H4I8 314 aa5.26□□□□□ -1.57
NCKAP1-204ENST00000477988 SFMBT1Q9UHJ3 866 aa5.26□□□□□ -1.57
NCKAP1-204ENST00000477988 DNAI1Q9UI46 699 aa5.26□□□□□ -1.57
NCKAP1-204ENST00000477988 COL11A2P13942 1736 aaPredicted RBP5.26□□□□□ -1.57
NCKAP1-204ENST00000477988 NRP1O14786 923 aa5.25□□□□□ -1.57
NCKAP1-204ENST00000477988 HOXA3O43365 443 aaPredicted RBP5.25□□□□□ -1.57
NCKAP1-204ENST00000477988 CYP17A1P05093 508 aa5.25□□□□□ -1.57
NCKAP1-204ENST00000477988 HNRNPLP14866 589 aaKnown RBP eCLIP5.25□□□□□ -1.57
NCKAP1-204ENST00000477988 KIF11P52732 1056 aa5.25□□□□□ -1.57
NCKAP1-204ENST00000477988 ARHGEF19Q8IW93 802 aa5.25□□□□□ -1.57
NCKAP1-204ENST00000477988 IGSF22Q8N9C0 903 aa5.25□□□□□ -1.57
NCKAP1-204ENST00000477988 GLB1L3Q8NCI6 653 aaPredicted RBP5.25□□□□□ -1.57
NCKAP1-204ENST00000477988 COQ10AQ96MF6 247 aa5.25□□□□□ -1.57
NCKAP1-204ENST00000477988 DCLRE1CQ96SD1 692 aaKnown RBP5.25□□□□□ -1.57
NCKAP1-204ENST00000477988 EIF2B4Q9UI10 523 aaKnown RBP5.25□□□□□ -1.57
NCKAP1-204ENST00000477988 CCDC163A0A0D9SF12 145 aa5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 TCRBV16S1A1N1A0A5B0 115 aa5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 GAGE12BA1L429 117 aa5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 GAGE12HA6NDE8 117 aa5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 AHRRA9YTQ3 701 aa5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 ZNF185O15231 689 aa5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 STC2O76061 302 aa5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 STK10O94804 968 aaKnown RBP5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 FSBPO95073 299 aa5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 MECP2P51608 486 aaKnown RBP5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 ERCC6LQ2NKX8 1250 aa5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 FBXO42Q6P3S6 717 aa5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 ABHD17CQ6PCB6 329 aa5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 FAM83AQ86UY5 434 aa5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 OR52N2Q8NGI0 321 aa5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 TUBGCP5Q96RT8 1024 aa5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 CPPED1Q9BRF8 314 aaPredicted RBP5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 NDC1Q9BTX1 674 aa5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 PITHD1Q9GZP4 211 aaPredicted RBP5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 ENKD1Q9H0I2 346 aa5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 ZNF768Q9H5H4 540 aaKnown RBP5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 SYBUQ9NX95 663 aa5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 INSL6Q9Y581 213 aa5.24□□□□□ -1.57
NCKAP1-204ENST00000477988 KDM2BQ8NHM5 1336 aa5.23□□□□□ -1.57
NCKAP1-204ENST00000477988 A0A0A6YYJ9 748 aa5.23□□□□□ -1.57
NCKAP1-204ENST00000477988 EPHA7Q15375 998 aa5.23□□□□□ -1.57
NCKAP1-204ENST00000477988 VPS72Q15906 364 aa5.23□□□□□ -1.57
NCKAP1-204ENST00000477988 PRAMEF9Q5VWM5 478 aa5.23□□□□□ -1.57
NCKAP1-204ENST00000477988 CCDC62Q6P9F0 684 aa5.23□□□□□ -1.57
NCKAP1-204ENST00000477988 LRP10Q7Z4F1 713 aa5.23□□□□□ -1.57
NCKAP1-204ENST00000477988 LCORLQ8N3X6 602 aa5.23□□□□□ -1.57
NCKAP1-204ENST00000477988 C9orf106Q8NAJ2 232 aa5.23□□□□□ -1.57
NCKAP1-204ENST00000477988 UIMC1Q96RL1 719 aa5.23□□□□□ -1.57
NCKAP1-204ENST00000477988 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.23□□□□□ -1.57
NCKAP1-204ENST00000477988 SPATA31A6Q5VVP1 1343 aa5.23□□□□□ -1.57
NCKAP1-204ENST00000477988 RNASET2O00584 256 aaKnown RBP5.22□□□□□ -1.57
NCKAP1-204ENST00000477988 WNT3AP56704 352 aa5.22□□□□□ -1.57
NCKAP1-204ENST00000477988 ADCY1Q08828 1119 aa5.22□□□□□ -1.57
NCKAP1-204ENST00000477988 PRR16Q569H4 304 aa5.22□□□□□ -1.57
NCKAP1-204ENST00000477988 DOK3Q7L591 496 aa5.22□□□□□ -1.57
NCKAP1-204ENST00000477988 KANSL1Q7Z3B3 1105 aa5.22□□□□□ -1.57
NCKAP1-204ENST00000477988 LINC00476Q8WZB0 136 aa5.22□□□□□ -1.57
NCKAP1-204ENST00000477988 MRPL4Q9BYD3 311 aaKnown RBP5.22□□□□□ -1.57
NCKAP1-204ENST00000477988 WDR11Q9BZH6 1224 aa5.22□□□□□ -1.57
NCKAP1-204ENST00000477988 SIRPGQ9P1W8 387 aa5.22□□□□□ -1.57
NCKAP1-204ENST00000477988 DKK2Q9UBU2 259 aa5.22□□□□□ -1.57
NCKAP1-204ENST00000477988 CLCA2Q9UQC9 943 aa5.22□□□□□ -1.57
NCKAP1-204ENST00000477988 FRMD4BQ9Y2L6 1034 aa5.22□□□□□ -1.57
NCKAP1-204ENST00000477988 EPN1Q9Y6I3 576 aaPredicted RBP5.22□□□□□ -1.57
NCKAP1-204ENST00000477988 COL3A1P02461 1466 aaPredicted RBP5.21□□□□□ -1.58
NCKAP1-204ENST00000477988 DVL2O14641 736 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms