RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 KRTAP9-7A8MTY7 169 aa6.47□□□□□ -1.37
VPS50-214ENST00000477935 GAS7O60861 476 aa6.47□□□□□ -1.37
VPS50-214ENST00000477935 CYP17A1P05093 508 aa6.47□□□□□ -1.37
VPS50-214ENST00000477935 SLC9A1P19634 815 aa6.47□□□□□ -1.37
VPS50-214ENST00000477935 HSD3B2P26439 372 aa6.47□□□□□ -1.37
VPS50-214ENST00000477935 POLD1P28340 1107 aa6.47□□□□□ -1.37
VPS50-214ENST00000477935 DSG1Q02413 1049 aa6.47□□□□□ -1.37
VPS50-214ENST00000477935 GPR162Q16538 588 aa6.47□□□□□ -1.37
VPS50-214ENST00000477935 SKOR2Q2VWA4 1001 aaPredicted RBP6.47□□□□□ -1.37
VPS50-214ENST00000477935 CXXC5Q7LFL8 322 aaKnown RBP6.47□□□□□ -1.37
VPS50-214ENST00000477935 GPR155Q7Z3F1 870 aa6.47□□□□□ -1.37
VPS50-214ENST00000477935 KRT28Q7Z3Y7 464 aa6.47□□□□□ -1.37
VPS50-214ENST00000477935 REXO1L1PQ8IX06 675 aa6.47□□□□□ -1.37
VPS50-214ENST00000477935 AHI1Q8N157 1196 aa6.47□□□□□ -1.37
VPS50-214ENST00000477935 NXPE1Q8N323 547 aa6.47□□□□□ -1.37
VPS50-214ENST00000477935 FOXRED1Q96CU9 486 aaPredicted RBP6.47□□□□□ -1.37
VPS50-214ENST00000477935 OXSMQ9NWU1 459 aa6.47□□□□□ -1.37
VPS50-214ENST00000477935 ADGRB2O60241 1585 aa6.47□□□□□ -1.37
VPS50-214ENST00000477935 SPATA31A5Q5VU36 1347 aa6.47□□□□□ -1.37
VPS50-214ENST00000477935 SPATA31A7Q8IWB4 1347 aa6.47□□□□□ -1.37
VPS50-214ENST00000477935 A0A087X0B3 334 aa6.46□□□□□ -1.38
VPS50-214ENST00000477935 HFM1A2PYH4 1435 aa6.46□□□□□ -1.38
VPS50-214ENST00000477935 PLSCR1O15162 318 aa6.46□□□□□ -1.38
VPS50-214ENST00000477935 SYN1P17600 705 aa6.46□□□□□ -1.38
VPS50-214ENST00000477935 PTX3P26022 381 aaPredicted RBP6.46□□□□□ -1.38
VPS50-214ENST00000477935 CSF2RBP32927 897 aa6.46□□□□□ -1.38
VPS50-214ENST00000477935 ADCY8P40145 1251 aa6.46□□□□□ -1.38
VPS50-214ENST00000477935 GYS2P54840 703 aa6.46□□□□□ -1.38
VPS50-214ENST00000477935 ALDH6A1Q02252 535 aaKnown RBP6.46□□□□□ -1.38
VPS50-214ENST00000477935 TOP3AQ13472 1001 aaPredicted RBP6.46□□□□□ -1.38
VPS50-214ENST00000477935 SEPT7Q16181 437 aaKnown RBP6.46□□□□□ -1.38
VPS50-214ENST00000477935 RALYLQ86SE5 291 aaKnown RBP6.46□□□□□ -1.38
VPS50-214ENST00000477935 XRN1Q8IZH2 1706 aaKnown RBP6.46□□□□□ -1.38
VPS50-214ENST00000477935 WDR48Q8TAF3 677 aa6.46□□□□□ -1.38
VPS50-214ENST00000477935 CALML6Q8TD86 181 aa6.46□□□□□ -1.38
VPS50-214ENST00000477935 ELF4Q99607 663 aaPredicted RBP6.46□□□□□ -1.38
VPS50-214ENST00000477935 FOXB1Q99853 325 aa6.46□□□□□ -1.38
VPS50-214ENST00000477935 BDH2Q9BUT1 245 aa6.46□□□□□ -1.38
VPS50-214ENST00000477935 IFT57Q9NWB7 429 aa6.46□□□□□ -1.38
VPS50-214ENST00000477935 H2AFY2Q9P0M6 372 aaPredicted RBP6.46□□□□□ -1.38
VPS50-214ENST00000477935 FBXO10Q9UK96 956 aa6.46□□□□□ -1.38
VPS50-214ENST00000477935 MARF1Q9Y4F3 1742 aaKnown RBP6.46□□□□□ -1.38
VPS50-214ENST00000477935 SPO11Q9Y5K1 396 aa6.46□□□□□ -1.38
VPS50-214ENST00000477935 GSG1L2A8MUP6 293 aa6.45□□□□□ -1.38
VPS50-214ENST00000477935 B4GALT4O60513 344 aa6.45□□□□□ -1.38
VPS50-214ENST00000477935 PDE8AO60658 829 aa6.45□□□□□ -1.38
VPS50-214ENST00000477935 CUTAO60888 179 aa6.45□□□□□ -1.38
VPS50-214ENST00000477935 PRLP01236 227 aa6.45□□□□□ -1.38
VPS50-214ENST00000477935 ZNF888P0CJ79 500 aaPredicted RBP6.45□□□□□ -1.38
VPS50-214ENST00000477935 MYCLP1P12525 358 aaPredicted RBP6.45□□□□□ -1.38
VPS50-214ENST00000477935 CD83Q01151 205 aa6.45□□□□□ -1.38
VPS50-214ENST00000477935 SURF1Q15526 300 aa6.45□□□□□ -1.38
VPS50-214ENST00000477935 TBC1D10BQ4KMP7 808 aaPredicted RBP6.45□□□□□ -1.38
VPS50-214ENST00000477935 TAF7LQ5H9L4 462 aa6.45□□□□□ -1.38
VPS50-214ENST00000477935 PLEKHH3Q7Z736 793 aa6.45□□□□□ -1.38
VPS50-214ENST00000477935 CHTF18Q8WVB6 975 aa6.45□□□□□ -1.38
VPS50-214ENST00000477935 E2F7Q96AV8 911 aa6.45□□□□□ -1.38
VPS50-214ENST00000477935 C16orf92Q96LL3 132 aa6.45□□□□□ -1.38
VPS50-214ENST00000477935 ZDHHC5Q9C0B5 715 aa6.45□□□□□ -1.38
VPS50-214ENST00000477935 CHD4Q14839 1912 aa6.44□□□□□ -1.38
VPS50-214ENST00000477935 MAP3K5Q99683 1374 aa6.44□□□□□ -1.38
VPS50-214ENST00000477935 CCDC144AA2RUR9 1427 aa6.44□□□□□ -1.38
VPS50-214ENST00000477935 ABCC5O15440 1437 aa6.44□□□□□ -1.38
VPS50-214ENST00000477935 UBA6A0AVT1 1052 aaPredicted RBP6.44□□□□□ -1.38
VPS50-214ENST00000477935 LAMTOR5O43504 91 aa6.44□□□□□ -1.38
VPS50-214ENST00000477935 PLATP00750 562 aa6.44□□□□□ -1.38
VPS50-214ENST00000477935 APEX1P27695 318 aaKnown RBP6.44□□□□□ -1.38
VPS50-214ENST00000477935 ETV4P43268 484 aa6.44□□□□□ -1.38
VPS50-214ENST00000477935 MOGSQ13724 837 aa6.44□□□□□ -1.38
VPS50-214ENST00000477935 USP10Q14694 798 aaKnown RBP6.44□□□□□ -1.38
VPS50-214ENST00000477935 ERICH6BQ5W0A0 696 aa6.44□□□□□ -1.38
VPS50-214ENST00000477935 TMEM200BQ69YZ2 307 aa6.44□□□□□ -1.38
VPS50-214ENST00000477935 ESRP1Q6NXG1 681 aaKnown RBP6.44□□□□□ -1.38
VPS50-214ENST00000477935 OTOP2Q7RTS6 562 aa6.44□□□□□ -1.38
VPS50-214ENST00000477935 SMC1BQ8NDV3 1235 aa6.44□□□□□ -1.38
VPS50-214ENST00000477935 CARD11Q9BXL7 1154 aa6.44□□□□□ -1.38
VPS50-214ENST00000477935 SLKQ9H2G2 1235 aaPredicted RBP6.44□□□□□ -1.38
VPS50-214ENST00000477935 TOMM22Q9NS69 142 aa6.44□□□□□ -1.38
VPS50-214ENST00000477935 THG1LQ9NWX6 298 aaKnown RBP6.44□□□□□ -1.38
VPS50-214ENST00000477935 PTPN22Q9Y2R2 807 aa6.44□□□□□ -1.38
VPS50-214ENST00000477935 ARHGEF10O15013 1369 aa6.44□□□□□ -1.38
VPS50-214ENST00000477935 PTPN23Q9H3S7 1636 aa6.43□□□□□ -1.38
VPS50-214ENST00000477935 NWD2Q9ULI1 1742 aa6.43□□□□□ -1.38
VPS50-214ENST00000477935 A0A0G2JNJ9 132 aa6.43□□□□□ -1.38
VPS50-214ENST00000477935 HMGCRP04035 888 aa6.43□□□□□ -1.38
VPS50-214ENST00000477935 CELA3BP08861 270 aa6.43□□□□□ -1.38
VPS50-214ENST00000477935 SCNN1BP51168 640 aa6.43□□□□□ -1.38
VPS50-214ENST00000477935 KCNQ1P51787 676 aa6.43□□□□□ -1.38
VPS50-214ENST00000477935 PPP2CBP62714 309 aa6.43□□□□□ -1.38
VPS50-214ENST00000477935 PPP2CAP67775 309 aa6.43□□□□□ -1.38
VPS50-214ENST00000477935 SLC6A3Q01959 620 aa6.43□□□□□ -1.38
VPS50-214ENST00000477935 PLP2Q04941 152 aa6.43□□□□□ -1.38
VPS50-214ENST00000477935 SART3Q15020 963 aaKnown RBP6.43□□□□□ -1.38
VPS50-214ENST00000477935 EIF4HQ15056 248 aaKnown RBP6.43□□□□□ -1.38
VPS50-214ENST00000477935 EPHA7Q15375 998 aa6.43□□□□□ -1.38
VPS50-214ENST00000477935 GRAMD4Q6IC98 578 aa6.43□□□□□ -1.38
VPS50-214ENST00000477935 NME9Q86XW9 330 aa6.43□□□□□ -1.38
VPS50-214ENST00000477935 IFNL2Q8IZJ0 200 aa6.43□□□□□ -1.38
VPS50-214ENST00000477935 EFHBQ8N7U6 833 aa6.43□□□□□ -1.38
VPS50-214ENST00000477935 Q9UFV3 132 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms