RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 KCTD2Q14681 263 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 XKR9Q5GH70 373 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 OTUD6AQ7L8S5 288 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 OR8K1Q8NGG5 319 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 SLC30A5Q8TAD4 765 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 GOLGA5Q8TBA6 731 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 COL1A2P08123 1366 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 TMTC1Q8IUR5 882 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 SMCR8Q8TEV9 937 aaPredicted RBP13.29□□□□□ -0.28
PRPF39-203ENST00000477626 CEP170P1Q96L14 293 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 ACCSQ96QU6 501 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 RNPEPQ9H4A4 650 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 LARSQ9P2J5 1176 aaKnown RBP13.29□□□□□ -0.28
PRPF39-203ENST00000477626 PTPRJQ12913 1337 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 PHLPP2Q6ZVD8 1323 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 CETN3O15182 167 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 DKC1O60832 514 aaKnown RBP eCLIP13.29□□□□□ -0.289e-9■■■■□ 19.9
PRPF39-203ENST00000477626 LRRN2O75325 713 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 PEX3P56589 373 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 BFSP1Q12934 665 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 DUSP28Q4G0W2 176 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 PLEKHH3Q7Z736 793 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 TRIM50Q86XT4 487 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 KAT2BQ92831 832 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 IFT122Q9HBG6 1241 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 METTL14Q9HCE5 456 aaKnown RBP13.29□□□□□ -0.28
PRPF39-203ENST00000477626 HSPBP1Q9NZL4 362 aa13.29□□□□□ -0.28
PRPF39-203ENST00000477626 K7ENM7 598 aa13.28□□□□□ -0.28
PRPF39-203ENST00000477626 PJA2O43164 708 aa13.28□□□□□ -0.28
PRPF39-203ENST00000477626 SLC9A1P19634 815 aa13.28□□□□□ -0.28
PRPF39-203ENST00000477626 PSMC2P35998 433 aaKnown RBP13.28□□□□□ -0.28
PRPF39-203ENST00000477626 STAT5BP51692 787 aa13.28□□□□□ -0.28
PRPF39-203ENST00000477626 POU5F1BQ06416 359 aa13.28□□□□□ -0.28
PRPF39-203ENST00000477626 BRDTQ58F21 947 aaPredicted RBP13.28□□□□□ -0.28
PRPF39-203ENST00000477626 TRPV1Q8NER1 839 aa13.28□□□□□ -0.28
PRPF39-203ENST00000477626 SCFD2Q8WU76 684 aa13.28□□□□□ -0.28
PRPF39-203ENST00000477626 ZNF516Q92618 1163 aa13.28□□□□□ -0.28
PRPF39-203ENST00000477626 POLR3FQ9H1D9 316 aaPredicted RBP13.28□□□□□ -0.28
PRPF39-203ENST00000477626 LRRC53A6NM62 1247 aa13.28□□□□□ -0.28
PRPF39-203ENST00000477626 EIF3CLB5ME19 914 aaKnown RBP13.28□□□□□ -0.28
PRPF39-203ENST00000477626 AFPP02771 609 aaKnown RBP13.28□□□□□ -0.28
PRPF39-203ENST00000477626 GARTP22102 1010 aa13.28□□□□□ -0.28
PRPF39-203ENST00000477626 KRT9P35527 623 aa13.28□□□□□ -0.28
PRPF39-203ENST00000477626 FMO5P49326 533 aa13.28□□□□□ -0.28
PRPF39-203ENST00000477626 SCARA3Q6AZY7 606 aa13.28□□□□□ -0.28
PRPF39-203ENST00000477626 CYP26C1Q6V0L0 522 aa13.28□□□□□ -0.28
PRPF39-203ENST00000477626 EIF3CQ99613 913 aaKnown RBP13.28□□□□□ -0.28
PRPF39-203ENST00000477626 TINF2Q9BSI4 451 aa13.28□□□□□ -0.28
PRPF39-203ENST00000477626 CITO14578 2027 aa13.28□□□□□ -0.28
PRPF39-203ENST00000477626 A6NJR5 290 aa13.27□□□□□ -0.28
PRPF39-203ENST00000477626 FAM187BQ17R55 369 aa13.27□□□□□ -0.28
PRPF39-203ENST00000477626 SEPT9Q9UHD8 586 aaPredicted RBP13.27□□□□□ -0.28
PRPF39-203ENST00000477626 NDUFA10O95299 355 aa13.27□□□□□ -0.28
PRPF39-203ENST00000477626 MTIF2P46199 727 aaKnown RBP13.27□□□□□ -0.28
PRPF39-203ENST00000477626 CCNA1P78396 465 aa13.27□□□□□ -0.28
PRPF39-203ENST00000477626 AMPD2Q01433 879 aa13.27□□□□□ -0.28
PRPF39-203ENST00000477626 GJC2Q5T442 439 aaPredicted RBP13.27□□□□□ -0.28
PRPF39-203ENST00000477626 CCDC170Q8IYT3 715 aa13.27□□□□□ -0.28
PRPF39-203ENST00000477626 UBR7Q8N806 425 aa13.27□□□□□ -0.28
PRPF39-203ENST00000477626 FZD8Q9H461 694 aa13.27□□□□□ -0.28
PRPF39-203ENST00000477626 MAGEC2Q9UBF1 373 aaPredicted RBP13.27□□□□□ -0.28
PRPF39-203ENST00000477626 DAAM1Q9Y4D1 1078 aa13.27□□□□□ -0.28
PRPF39-203ENST00000477626 A0A0B4J269 797 aa13.27□□□□□ -0.29
PRPF39-203ENST00000477626 P4HA2O15460 535 aa13.27□□□□□ -0.29
PRPF39-203ENST00000477626 MMP3P08254 477 aa13.27□□□□□ -0.29
PRPF39-203ENST00000477626 ACTN1P12814 892 aa13.27□□□□□ -0.29
PRPF39-203ENST00000477626 CNGA1P29973 690 aa13.27□□□□□ -0.29
PRPF39-203ENST00000477626 HUNKP57058 714 aa13.27□□□□□ -0.29
PRPF39-203ENST00000477626 MKRN3Q13064 507 aaKnown RBP13.27□□□□□ -0.29
PRPF39-203ENST00000477626 TPD52L1Q16890 204 aaPredicted RBP13.27□□□□□ -0.29
PRPF39-203ENST00000477626 WDR24Q96S15 920 aa13.27□□□□□ -0.29
PRPF39-203ENST00000477626 ARMCX3Q9UH62 379 aaPredicted RBP13.27□□□□□ -0.29
PRPF39-203ENST00000477626 SAMM50Q9Y512 469 aa13.27□□□□□ -0.29
PRPF39-203ENST00000477626 SSU72P8A0A1W2PR75 194 aa13.26□□□□□ -0.29
PRPF39-203ENST00000477626 MBLAC1A4D2B0 266 aaPredicted RBP13.26□□□□□ -0.29
PRPF39-203ENST00000477626 LRRIQ3A6PVS8 624 aaPredicted RBP13.26□□□□□ -0.29
PRPF39-203ENST00000477626 ADCY3O60266 1144 aa13.26□□□□□ -0.29
PRPF39-203ENST00000477626 LGALS2P05162 132 aa13.26□□□□□ -0.29
PRPF39-203ENST00000477626 KRT18P05783 430 aaKnown RBP13.26□□□□□ -0.29
PRPF39-203ENST00000477626 UCHL3P15374 230 aa13.26□□□□□ -0.29
PRPF39-203ENST00000477626 ADCYAP1R1P41586 468 aa13.26□□□□□ -0.29
PRPF39-203ENST00000477626 PHLDB3Q6NSJ2 640 aa13.26□□□□□ -0.29
PRPF39-203ENST00000477626 ACRBPQ8NEB7 543 aa13.26□□□□□ -0.29
PRPF39-203ENST00000477626 PSPC1Q8WXF1 523 aaKnown RBP13.26□□□□□ -0.29
PRPF39-203ENST00000477626 DESI2Q9BSY9 194 aa13.26□□□□□ -0.29
PRPF39-203ENST00000477626 GAS2O43903 313 aaKnown RBP13.26□□□□□ -0.29
PRPF39-203ENST00000477626 SORBS3O60504 671 aa13.26□□□□□ -0.29
PRPF39-203ENST00000477626 MAP2K5Q13163 448 aa13.26□□□□□ -0.29
PRPF39-203ENST00000477626 FAM102BQ5T8I3 360 aa13.26□□□□□ -0.29
PRPF39-203ENST00000477626 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.26□□□□□ -0.29
PRPF39-203ENST00000477626 FAM186BQ8IYM0 893 aa13.26□□□□□ -0.29
PRPF39-203ENST00000477626 TMC2Q8TDI7 906 aa13.26□□□□□ -0.29
PRPF39-203ENST00000477626 NHEJ1Q9H9Q4 299 aaPredicted RBP13.26□□□□□ -0.29
PRPF39-203ENST00000477626 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.26□□□□□ -0.29
PRPF39-203ENST00000477626 MBTD1Q05BQ5 628 aa13.26□□□□□ -0.29
PRPF39-203ENST00000477626 LAMC2Q13753 1193 aa13.26□□□□□ -0.29
PRPF39-203ENST00000477626 PARD3BQ8TEW8 1205 aa13.26□□□□□ -0.29
PRPF39-203ENST00000477626 SEMA4DQ92854 862 aa13.26□□□□□ -0.29
PRPF39-203ENST00000477626 SALL4Q9UJQ4 1053 aa13.26□□□□□ -0.29
PRPF39-203ENST00000477626 FHOD1Q9Y613 1164 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms