RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 HOXA11P31270 313 aaPredicted RBP24.2■■□□□ 1.46
COL9A3-211ENST00000477612 RAB27AP51159 221 aa24.2■■□□□ 1.46
COL9A3-211ENST00000477612 PTGDRQ13258 359 aa24.2■■□□□ 1.46
COL9A3-211ENST00000477612 TWF2Q6IBS0 349 aaKnown RBP24.2■■□□□ 1.46
COL9A3-211ENST00000477612 ABI1Q8IZP0 508 aa24.2■■□□□ 1.46
COL9A3-211ENST00000477612 LRRC43Q8N309 656 aa24.2■■□□□ 1.46
COL9A3-211ENST00000477612 IGSF22Q8N9C0 903 aa24.2■■□□□ 1.46
COL9A3-211ENST00000477612 COLGALT1Q8NBJ5 622 aa24.2■■□□□ 1.46
COL9A3-211ENST00000477612 ADAMTS19Q8TE59 1207 aa24.2■■□□□ 1.46
COL9A3-211ENST00000477612 POF1BQ8WVV4 589 aa24.2■■□□□ 1.46
COL9A3-211ENST00000477612 FAM105AQ9NUU6 356 aa24.2■■□□□ 1.46
COL9A3-211ENST00000477612 HCSTQ9UBK5 93 aa24.2■■□□□ 1.46
COL9A3-211ENST00000477612 PRPHP41219 470 aa24.19■■□□□ 1.46
COL9A3-211ENST00000477612 PLCB3Q01970 1234 aa24.19■■□□□ 1.46
COL9A3-211ENST00000477612 CUL4AQ13619 759 aa24.19■■□□□ 1.46
COL9A3-211ENST00000477612 CTC1Q2NKJ3 1217 aa24.19■■□□□ 1.46
COL9A3-211ENST00000477612 LEXMQ3ZCV2 418 aa24.19■■□□□ 1.46
COL9A3-211ENST00000477612 RILPL1Q5EBL4 403 aa24.19■■□□□ 1.46
COL9A3-211ENST00000477612 SPOUT1Q5T280 376 aaKnown RBP24.19■■□□□ 1.46
COL9A3-211ENST00000477612 HAUS3Q68CZ6 603 aa24.19■■□□□ 1.46
COL9A3-211ENST00000477612 SMC3Q9UQE7 1217 aa24.19■■□□□ 1.46
COL9A3-211ENST00000477612 STK24Q9Y6E0 443 aa24.19■■□□□ 1.46
COL9A3-211ENST00000477612 A0A087WWV3 80 aa24.18■■□□□ 1.46
COL9A3-211ENST00000477612 GLRA2P23416 452 aa24.18■■□□□ 1.46
COL9A3-211ENST00000477612 AXLP30530 894 aa24.18■■□□□ 1.46
COL9A3-211ENST00000477612 CAPSQ13938 189 aa24.18■■□□□ 1.46
COL9A3-211ENST00000477612 TFDP1Q14186 410 aa24.18■■□□□ 1.46
COL9A3-211ENST00000477612 MRPL10Q7Z7H8 261 aaKnown RBP24.18■■□□□ 1.46
COL9A3-211ENST00000477612 ASAP3Q8TDY4 903 aa24.18■■□□□ 1.46
COL9A3-211ENST00000477612 CCDC43Q96MW1 224 aaKnown RBP24.18■■□□□ 1.46
COL9A3-211ENST00000477612 LRWD1Q9UFC0 647 aa24.18■■□□□ 1.46
COL9A3-211ENST00000477612 FGF18O76093 207 aa24.17■■□□□ 1.46
COL9A3-211ENST00000477612 POTEGQ6S5H5 508 aa24.17■■□□□ 1.46
COL9A3-211ENST00000477612 RNF169Q8NCN4 708 aa24.17■■□□□ 1.46
COL9A3-211ENST00000477612 MCPH1Q8NEM0 835 aa24.17■■□□□ 1.46
COL9A3-211ENST00000477612 HELQQ8TDG4 1101 aa24.17■■□□□ 1.46
COL9A3-211ENST00000477612 MRPL9Q9BYD2 267 aaKnown RBP24.17■■□□□ 1.46
COL9A3-211ENST00000477612 RAB34Q9BZG1 259 aa24.17■■□□□ 1.46
COL9A3-211ENST00000477612 LZTS1Q9Y250 596 aa24.17■■□□□ 1.46
COL9A3-211ENST00000477612 H3BQV1 296 aa24.16■■□□□ 1.46
COL9A3-211ENST00000477612 IRS1P35568 1242 aa24.16■■□□□ 1.46
COL9A3-211ENST00000477612 HYAL1Q12794 435 aa24.16■■□□□ 1.46
COL9A3-211ENST00000477612 ECM1Q16610 540 aa24.16■■□□□ 1.46
COL9A3-211ENST00000477612 UBXN11Q5T124 520 aa24.16■■□□□ 1.46
COL9A3-211ENST00000477612 MCTP1Q6DN14 999 aa24.16■■□□□ 1.46
COL9A3-211ENST00000477612 KCNT2Q6UVM3 1135 aa24.16■■□□□ 1.46
COL9A3-211ENST00000477612 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.16■■□□□ 1.46
COL9A3-211ENST00000477612 PGBD4Q96DM1 585 aa24.16■■□□□ 1.46
COL9A3-211ENST00000477612 UHRF1Q96T88 793 aaPredicted RBP24.16■■□□□ 1.46
COL9A3-211ENST00000477612 PCDHB2Q9Y5E7 798 aa24.16■■□□□ 1.46
COL9A3-211ENST00000477612 USO1O60763 962 aaKnown RBP24.15■■□□□ 1.46
COL9A3-211ENST00000477612 KCNA5P22460 613 aa24.15■■□□□ 1.46
COL9A3-211ENST00000477612 MBTD1Q05BQ5 628 aa24.15■■□□□ 1.46
COL9A3-211ENST00000477612 IL17AQ16552 155 aa24.15■■□□□ 1.46
COL9A3-211ENST00000477612 AMHR2Q16671 573 aa24.15■■□□□ 1.46
COL9A3-211ENST00000477612 LARP1BQ659C4 914 aaKnown RBP24.15■■□□□ 1.46
COL9A3-211ENST00000477612 PDE12Q6L8Q7 609 aaKnown RBP24.15■■□□□ 1.46
COL9A3-211ENST00000477612 POLR3FQ9H1D9 316 aaPredicted RBP24.15■■□□□ 1.46
COL9A3-211ENST00000477612 TNFRSF10AO00220 468 aa24.14■■□□□ 1.45
COL9A3-211ENST00000477612 TSPAN1O60635 241 aa24.14■■□□□ 1.45
COL9A3-211ENST00000477612 OFD1O75665 1012 aa24.14■■□□□ 1.45
COL9A3-211ENST00000477612 ERLIN2O94905 339 aa24.14■■□□□ 1.45
COL9A3-211ENST00000477612 CYP11B2P19099 503 aa24.14■■□□□ 1.45
COL9A3-211ENST00000477612 PPM1AP35813 382 aa24.14■■□□□ 1.45
COL9A3-211ENST00000477612 LTBRP36941 435 aa24.14■■□□□ 1.45
COL9A3-211ENST00000477612 CCT6AP40227 531 aaKnown RBP24.14■■□□□ 1.45
COL9A3-211ENST00000477612 ATP2C1P98194 919 aaPredicted RBP24.14■■□□□ 1.45
COL9A3-211ENST00000477612 AGMOQ6ZNB7 445 aa24.14■■□□□ 1.45
COL9A3-211ENST00000477612 THNSL1Q8IYQ7 743 aa24.14■■□□□ 1.45
COL9A3-211ENST00000477612 CNNM3Q8NE01 707 aa24.14■■□□□ 1.45
COL9A3-211ENST00000477612 MRPS27Q92552 414 aaKnown RBP24.14■■□□□ 1.45
COL9A3-211ENST00000477612 LPPQ93052 612 aa24.14■■□□□ 1.45
COL9A3-211ENST00000477612 PPP2R3CQ969Q6 453 aa24.14■■□□□ 1.45
COL9A3-211ENST00000477612 CCDC51Q96ER9 411 aa24.14■■□□□ 1.45
COL9A3-211ENST00000477612 ZNF558Q96NG5 402 aa24.14■■□□□ 1.45
COL9A3-211ENST00000477612 CARNS1A5YM72 827 aa24.13■■□□□ 1.45
COL9A3-211ENST00000477612 MEIS3P2A8K0S8 358 aa24.13■■□□□ 1.45
COL9A3-211ENST00000477612 FSCN2O14926 492 aa24.13■■□□□ 1.45
COL9A3-211ENST00000477612 NCLP19338 710 aaKnown RBP24.13■■□□□ 1.45
COL9A3-211ENST00000477612 ADAM15Q13444 863 aa24.13■■□□□ 1.45
COL9A3-211ENST00000477612 PUS10Q3MIT2 529 aaKnown RBP24.13■■□□□ 1.45
COL9A3-211ENST00000477612 PADI6Q6TGC4 694 aa24.13■■□□□ 1.45
COL9A3-211ENST00000477612 DTHD1Q6ZMT9 781 aa24.13■■□□□ 1.45
COL9A3-211ENST00000477612 GPRC5CQ9NQ84 441 aa24.13■■□□□ 1.45
COL9A3-211ENST00000477612 TLR9Q9NR96 1032 aa24.13■■□□□ 1.45
COL9A3-211ENST00000477612 TDRD15B5MCY1 1934 aaKnown RBP24.13■■□□□ 1.45
COL9A3-211ENST00000477612 CNTNAP2Q9UHC6 1331 aa24.12■■□□□ 1.45
COL9A3-211ENST00000477612 ARHGEF35A5YM69 484 aa24.12■■□□□ 1.45
COL9A3-211ENST00000477612 INO80B-WBP1J3KQ70 363 aa24.12■■□□□ 1.45
COL9A3-211ENST00000477612 ERVFC1P60507 584 aa24.12■■□□□ 1.45
COL9A3-211ENST00000477612 NCBP1Q09161 790 aaKnown RBP24.12■■□□□ 1.45
COL9A3-211ENST00000477612 CDCA2Q69YH5 1023 aaPredicted RBP24.12■■□□□ 1.45
COL9A3-211ENST00000477612 NOTUMQ6P988 496 aa24.12■■□□□ 1.45
COL9A3-211ENST00000477612 GLB1LQ6UWU2 654 aa24.12■■□□□ 1.45
COL9A3-211ENST00000477612 ADGRD2Q7Z7M1 963 aa24.12■■□□□ 1.45
COL9A3-211ENST00000477612 SLC39A11Q8N1S5 342 aa24.12■■□□□ 1.45
COL9A3-211ENST00000477612 SNX29Q8TEQ0 813 aa24.12■■□□□ 1.45
COL9A3-211ENST00000477612 CLDND1Q9NY35 253 aa24.12■■□□□ 1.45
COL9A3-211ENST00000477612 SPG21Q9NZD8 308 aa24.12■■□□□ 1.45
COL9A3-211ENST00000477612 KIAA1024Q9UPX6 916 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms