RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 GOPCQ9HD26 462 aa19.58■□□□□ 0.73
CCM2-209ENST00000477605 OSGEPQ9NPF4 335 aa19.58■□□□□ 0.73
CCM2-209ENST00000477605 PPP1R9AQ9ULJ8 1098 aa19.58■□□□□ 0.73
CCM2-209ENST00000477605 PCDHAC2Q9Y5I4 1007 aa19.58■□□□□ 0.73
CCM2-209ENST00000477605 A0A1W2PRG0 241 aa19.58■□□□□ 0.72
CCM2-209ENST00000477605 CFBP00751 764 aa19.58■□□□□ 0.72
CCM2-209ENST00000477605 KRT13P13646 458 aa19.58■□□□□ 0.72
CCM2-209ENST00000477605 CDR1P51861 262 aa19.58■□□□□ 0.72
CCM2-209ENST00000477605 PPP2R2AP63151 447 aa19.58■□□□□ 0.72
CCM2-209ENST00000477605 C12orf56Q8IXR9 622 aa19.58■□□□□ 0.72
CCM2-209ENST00000477605 MORC4Q8TE76 937 aa19.58■□□□□ 0.72
CCM2-209ENST00000477605 AGPAT1Q99943 283 aa19.58■□□□□ 0.72
CCM2-209ENST00000477605 TEKT3Q9BXF9 490 aa19.58■□□□□ 0.72
CCM2-209ENST00000477605 TMEM206Q9H813 350 aa19.58■□□□□ 0.72
CCM2-209ENST00000477605 TMX2Q9Y320 296 aa19.58■□□□□ 0.72
CCM2-209ENST00000477605 GMNCA6NCL1 334 aa19.57■□□□□ 0.72
CCM2-209ENST00000477605 ECE2O60344 883 aa19.57■□□□□ 0.72
CCM2-209ENST00000477605 EXOC3O60645 756 aa19.57■□□□□ 0.72
CCM2-209ENST00000477605 YBX3P16989 372 aaKnown RBP eCLIP19.57■□□□□ 0.72
CCM2-209ENST00000477605 YY1P25490 414 aa19.57■□□□□ 0.72
CCM2-209ENST00000477605 CYP2J2P51589 502 aa19.57■□□□□ 0.72
CCM2-209ENST00000477605 DHX9Q08211 1270 aaKnown RBP19.57■□□□□ 0.72
CCM2-209ENST00000477605 ICE2Q659A1 982 aa19.57■□□□□ 0.72
CCM2-209ENST00000477605 DUPD1Q68J44 220 aa19.57■□□□□ 0.72
CCM2-209ENST00000477605 CC2D2BQ6DHV5 1058 aa19.57■□□□□ 0.72
CCM2-209ENST00000477605 INTS8Q75QN2 995 aaKnown RBP19.57■□□□□ 0.72
CCM2-209ENST00000477605 ERP44Q9BS26 406 aa19.57■□□□□ 0.72
CCM2-209ENST00000477605 DEFB129Q9H1M3 183 aa19.57■□□□□ 0.72
CCM2-209ENST00000477605 RANBP17Q9H2T7 1088 aaKnown RBP19.57■□□□□ 0.72
CCM2-209ENST00000477605 CNOT10Q9H9A5 744 aaKnown RBP19.57■□□□□ 0.72
CCM2-209ENST00000477605 POLD4Q9HCU8 107 aa19.57■□□□□ 0.72
CCM2-209ENST00000477605 PMM2O15305 246 aa19.56■□□□□ 0.72
CCM2-209ENST00000477605 USP8P40818 1118 aa19.56■□□□□ 0.72
CCM2-209ENST00000477605 SNRPFP62306 86 aaKnown RBP19.56■□□□□ 0.72
CCM2-209ENST00000477605 JAG1P78504 1218 aa19.56■□□□□ 0.72
CCM2-209ENST00000477605 DR1Q01658 176 aa19.56■□□□□ 0.72
CCM2-209ENST00000477605 COG2Q14746 738 aa19.56■□□□□ 0.72
CCM2-209ENST00000477605 LMO3Q8TAP4 145 aa19.56■□□□□ 0.72
CCM2-209ENST00000477605 FMO2Q99518 471 aa19.56■□□□□ 0.72
CCM2-209ENST00000477605 ZNF577Q9BSK1 485 aa19.56■□□□□ 0.72
CCM2-209ENST00000477605 RASAL2Q9UJF2 1139 aa19.56■□□□□ 0.72
CCM2-209ENST00000477605 USP20Q9Y2K6 914 aa19.56■□□□□ 0.72
CCM2-209ENST00000477605 ARHGEF35A5YM69 484 aa19.56■□□□□ 0.72
CCM2-209ENST00000477605 E7EVH7 732 aa19.56■□□□□ 0.72
CCM2-209ENST00000477605 MAPK13O15264 365 aa19.56■□□□□ 0.72
CCM2-209ENST00000477605 TRAPPC3O43617 180 aa19.56■□□□□ 0.72
CCM2-209ENST00000477605 CHMP2AO43633 222 aa19.56■□□□□ 0.72
CCM2-209ENST00000477605 GGPS1O95749 300 aa19.56■□□□□ 0.72
CCM2-209ENST00000477605 HPDP32754 393 aaPredicted RBP19.56■□□□□ 0.72
CCM2-209ENST00000477605 CROCCP2Q86T23 111 aa19.56■□□□□ 0.72
CCM2-209ENST00000477605 SYCP3Q8IZU3 236 aa19.56■□□□□ 0.72
CCM2-209ENST00000477605 RPS6KC1Q96S38 1066 aa19.56■□□□□ 0.72
CCM2-209ENST00000477605 CENPHQ9H3R5 247 aa19.56■□□□□ 0.72
CCM2-209ENST00000477605 SYNGAP1Q96PV0 1343 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 FLT3P36888 993 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 PLCB4Q15147 1175 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 PTPROQ16827 1216 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 DCAF12L1Q5VU92 463 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 PHLDB3Q6NSJ2 640 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 FAM160B2Q86V87 743 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 HOOK3Q86VS8 718 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 CNPY4Q8N129 248 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 UBL4BQ8N7F7 174 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 OR2W6PQ8NHA6 318 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 ATP8B4Q8TF62 1192 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 THAP2Q9H0W7 228 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 UNC45AQ9H3U1 944 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 NUDT17P0C025 328 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 TRIM49P0CI25 452 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 TRIM49CP0CI26 452 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 ABCB4P21439 1286 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 MCCD1P59942 119 aaPredicted RBP19.55■□□□□ 0.72
CCM2-209ENST00000477605 ODF2Q5BJF6 829 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 C6orf89Q6UWU4 347 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 CENPTQ96BT3 561 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 ARHGEF26Q96DR7 871 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 RUNDC3BQ96NL0 473 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 CSRNP1Q96S65 589 aa19.55■□□□□ 0.72
CCM2-209ENST00000477605 TDRD3Q9H7E2 651 aaKnown RBP19.55■□□□□ 0.72
CCM2-209ENST00000477605 LARSQ9P2J5 1176 aaKnown RBP19.55■□□□□ 0.72
CCM2-209ENST00000477605 IGSF9BQ9UPX0 1349 aa19.54■□□□□ 0.72
CCM2-209ENST00000477605 FOXN3O00409 490 aaPredicted RBP19.54■□□□□ 0.72
CCM2-209ENST00000477605 HIP1RO75146 1068 aa19.54■□□□□ 0.72
CCM2-209ENST00000477605 MTA2O94776 668 aa19.54■□□□□ 0.72
CCM2-209ENST00000477605 CHRNA3P32297 505 aa19.54■□□□□ 0.72
CCM2-209ENST00000477605 SEC24CP53992 1094 aa19.54■□□□□ 0.72
CCM2-209ENST00000477605 MAPK7Q13164 816 aa19.54■□□□□ 0.72
CCM2-209ENST00000477605 STYK1Q6J9G0 422 aa19.54■□□□□ 0.72
CCM2-209ENST00000477605 PRPF38AQ8NAV1 312 aaKnown RBP19.54■□□□□ 0.72
CCM2-209ENST00000477605 TLCD1Q96CP7 247 aa19.54■□□□□ 0.72
CCM2-209ENST00000477605 CELF4Q9BZC1 486 aaKnown RBP19.54■□□□□ 0.72
CCM2-209ENST00000477605 IKZF4Q9H2S9 585 aa19.54■□□□□ 0.72
CCM2-209ENST00000477605 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.54■□□□□ 0.72
CCM2-209ENST00000477605 ZDHHC18Q9NUE0 388 aa19.54■□□□□ 0.72
CCM2-209ENST00000477605 PARP2Q9UGN5 583 aa19.54■□□□□ 0.72
CCM2-209ENST00000477605 C5orf60A6NFR6 353 aa19.53■□□□□ 0.72
CCM2-209ENST00000477605 ZBTB39O15060 712 aa19.53■□□□□ 0.72
CCM2-209ENST00000477605 TAL1P17542 331 aaPredicted RBP19.53■□□□□ 0.72
CCM2-209ENST00000477605 VCAM1P19320 739 aa19.53■□□□□ 0.72
CCM2-209ENST00000477605 FNTAP49354 379 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms