RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 A0A0U1RQF3 1178 aa19.6■□□□□ 0.73
PTPN7-209ENST00000477554 ITGB1P05556 798 aa19.6■□□□□ 0.73
PTPN7-209ENST00000477554 SFPQP23246 707 aaKnown RBP eCLIP19.6■□□□□ 0.73
PTPN7-209ENST00000477554 PHKA2P46019 1235 aa19.6■□□□□ 0.73
PTPN7-209ENST00000477554 PTENP60484 403 aa19.6■□□□□ 0.73
PTPN7-209ENST00000477554 MBTD1Q05BQ5 628 aa19.6■□□□□ 0.73
PTPN7-209ENST00000477554 PDIA5Q14554 519 aa19.6■□□□□ 0.73
PTPN7-209ENST00000477554 ZRSR1Q15695 479 aaKnown RBP19.6■□□□□ 0.73
PTPN7-209ENST00000477554 ODR4Q5SWX8 454 aa19.6■□□□□ 0.73
PTPN7-209ENST00000477554 TWF2Q6IBS0 349 aaKnown RBP19.6■□□□□ 0.73
PTPN7-209ENST00000477554 DTHD1Q6ZMT9 781 aa19.6■□□□□ 0.73
PTPN7-209ENST00000477554 KLHL23Q8NBE8 558 aa19.6■□□□□ 0.73
PTPN7-209ENST00000477554 ERMNQ8TAM6 284 aa19.6■□□□□ 0.73
PTPN7-209ENST00000477554 TCP11Q8WWU5 503 aa19.6■□□□□ 0.73
PTPN7-209ENST00000477554 NACC1Q96RE7 527 aa19.6■□□□□ 0.73
PTPN7-209ENST00000477554 KIFC3Q9BVG8 833 aa19.6■□□□□ 0.73
PTPN7-209ENST00000477554 AGPAT5Q9NUQ2 364 aa19.6■□□□□ 0.73
PTPN7-209ENST00000477554 MTMR6Q9Y217 621 aa19.6■□□□□ 0.73
PTPN7-209ENST00000477554 B4GALT3O60512 393 aa19.59■□□□□ 0.73
PTPN7-209ENST00000477554 TSPAN1O60635 241 aa19.59■□□□□ 0.73
PTPN7-209ENST00000477554 BRD1O95696 1058 aa19.59■□□□□ 0.73
PTPN7-209ENST00000477554 ZSCAN22P10073 491 aaPredicted RBP19.59■□□□□ 0.73
PTPN7-209ENST00000477554 XRCC6P12956 609 aaKnown RBP eCLIP19.59■□□□□ 0.73
PTPN7-209ENST00000477554 PRPHP41219 470 aa19.59■□□□□ 0.73
PTPN7-209ENST00000477554 SKIV2LQ15477 1246 aaKnown RBP19.59■□□□□ 0.73
PTPN7-209ENST00000477554 CCDC43Q96MW1 224 aaKnown RBP19.59■□□□□ 0.73
PTPN7-209ENST00000477554 EIF2AQ9BY44 585 aaKnown RBP19.59■□□□□ 0.73
PTPN7-209ENST00000477554 ELAC1Q9H777 363 aaKnown RBP19.59■□□□□ 0.73
PTPN7-209ENST00000477554 PLAGL2Q9UPG8 496 aa19.59■□□□□ 0.73
PTPN7-209ENST00000477554 BRWD1Q9NSI6 2320 aa19.59■□□□□ 0.73
PTPN7-209ENST00000477554 C5orf42Q9H799 3197 aa19.59■□□□□ 0.73
PTPN7-209ENST00000477554 GTF2F1P35269 517 aaKnown RBP eCLIP19.59■□□□□ 0.731e-6■□□□□ 10.7
PTPN7-209ENST00000477554 IRS1P35568 1242 aa19.59■□□□□ 0.73
PTPN7-209ENST00000477554 PKP1Q13835 747 aa19.59■□□□□ 0.73
PTPN7-209ENST00000477554 SF3A1Q15459 793 aaKnown RBP19.59■□□□□ 0.73
PTPN7-209ENST00000477554 SRGAP1Q7Z6B7 1085 aa19.59■□□□□ 0.73
PTPN7-209ENST00000477554 ZNF710Q8N1W2 664 aa19.59■□□□□ 0.73
PTPN7-209ENST00000477554 MRPL38Q96DV4 380 aaKnown RBP19.59■□□□□ 0.73
PTPN7-209ENST00000477554 RUSC1Q9BVN2 902 aa19.59■□□□□ 0.73
PTPN7-209ENST00000477554 RNF39Q9H2S5 420 aa19.59■□□□□ 0.73
PTPN7-209ENST00000477554 FAM105AQ9NUU6 356 aa19.59■□□□□ 0.73
PTPN7-209ENST00000477554 ARHGEF35A5YM69 484 aa19.58■□□□□ 0.72
PTPN7-209ENST00000477554 INO80B-WBP1J3KQ70 363 aa19.58■□□□□ 0.72
PTPN7-209ENST00000477554 LAD1O00515 517 aa19.58■□□□□ 0.72
PTPN7-209ENST00000477554 GAS2O43903 313 aaKnown RBP19.58■□□□□ 0.72
PTPN7-209ENST00000477554 CYP11B2P19099 503 aa19.58■□□□□ 0.72
PTPN7-209ENST00000477554 CDC42EP1Q00587 391 aa19.58■□□□□ 0.72
PTPN7-209ENST00000477554 TCEAL5Q5H9L2 206 aa19.58■□□□□ 0.72
PTPN7-209ENST00000477554 HAUS3Q68CZ6 603 aa19.58■□□□□ 0.72
PTPN7-209ENST00000477554 SMG8Q8ND04 991 aaKnown RBP19.58■□□□□ 0.72
PTPN7-209ENST00000477554 SPPL3Q8TCT6 385 aa19.58■□□□□ 0.72
PTPN7-209ENST00000477554 SAMD11Q96NU1 681 aa19.58■□□□□ 0.72
PTPN7-209ENST00000477554 INO80BQ9C086 356 aaPredicted RBP19.58■□□□□ 0.72
PTPN7-209ENST00000477554 ZSCAN16Q9H4T2 348 aaPredicted RBP19.58■□□□□ 0.72
PTPN7-209ENST00000477554 HES2Q9Y543 173 aa19.58■□□□□ 0.72
PTPN7-209ENST00000477554 TCF20Q9UGU0 1960 aaKnown RBP19.58■□□□□ 0.72
PTPN7-209ENST00000477554 LRRIQ4A6NIV6 560 aa19.57■□□□□ 0.72
PTPN7-209ENST00000477554 ASAP2O43150 1006 aa19.57■□□□□ 0.72
PTPN7-209ENST00000477554 KCNQ1P51787 676 aa19.57■□□□□ 0.72
PTPN7-209ENST00000477554 MXD4Q14582 209 aaPredicted RBP19.57■□□□□ 0.72
PTPN7-209ENST00000477554 PTPAQ15257 358 aa19.57■□□□□ 0.72
PTPN7-209ENST00000477554 SPECC1Q5M775 1068 aa19.57■□□□□ 0.72
PTPN7-209ENST00000477554 FOXD4L5Q5VV16 416 aaPredicted RBP19.57■□□□□ 0.72
PTPN7-209ENST00000477554 AGMOQ6ZNB7 445 aa19.57■□□□□ 0.72
PTPN7-209ENST00000477554 USP49Q70CQ1 688 aa19.57■□□□□ 0.72
PTPN7-209ENST00000477554 IFNLR1Q8IU57 520 aaPredicted RBP19.57■□□□□ 0.72
PTPN7-209ENST00000477554 EXOC8Q8IYI6 725 aa19.57■□□□□ 0.72
PTPN7-209ENST00000477554 DAW1Q8N136 415 aa19.57■□□□□ 0.72
PTPN7-209ENST00000477554 COLGALT1Q8NBJ5 622 aa19.57■□□□□ 0.72
PTPN7-209ENST00000477554 FOXD4L4Q8WXT5 416 aaPredicted RBP19.57■□□□□ 0.72
PTPN7-209ENST00000477554 COL25A1Q9BXS0 654 aaPredicted RBP19.57■□□□□ 0.72
PTPN7-209ENST00000477554 TMEM117Q9H0C3 514 aa19.57■□□□□ 0.72
PTPN7-209ENST00000477554 CHST12Q9NRB3 414 aa19.57■□□□□ 0.72
PTPN7-209ENST00000477554 PCDHB2Q9Y5E7 798 aa19.57■□□□□ 0.72
PTPN7-209ENST00000477554 F13A1P00488 732 aa19.56■□□□□ 0.72
PTPN7-209ENST00000477554 ARF4P18085 180 aaPredicted RBP19.56■□□□□ 0.72
PTPN7-209ENST00000477554 CEBPZQ03701 1054 aaKnown RBP19.56■□□□□ 0.72
PTPN7-209ENST00000477554 RAD51AP2Q09MP3 1159 aa19.56■□□□□ 0.72
PTPN7-209ENST00000477554 SPOUT1Q5T280 376 aaKnown RBP19.56■□□□□ 0.72
PTPN7-209ENST00000477554 KRT79Q5XKE5 535 aa19.56■□□□□ 0.72
PTPN7-209ENST00000477554 BRAPQ7Z569 592 aa19.56■□□□□ 0.72
PTPN7-209ENST00000477554 ADGRD2Q7Z7M1 963 aa19.56■□□□□ 0.72
PTPN7-209ENST00000477554 TMEM173Q86WV6 379 aaPredicted RBP19.56■□□□□ 0.72
PTPN7-209ENST00000477554 DACT1Q9NYF0 836 aa19.56■□□□□ 0.72
PTPN7-209ENST00000477554 INPP5FQ9Y2H2 1132 aa19.56■□□□□ 0.72
PTPN7-209ENST00000477554 ATP6V1DQ9Y5K8 247 aa19.56■□□□□ 0.72
PTPN7-209ENST00000477554 MYH15Q9Y2K3 1946 aa19.55■□□□□ 0.72
PTPN7-209ENST00000477554 NPHP3-ACAD11A0A0J9YXS1 232 aa19.55■□□□□ 0.72
PTPN7-209ENST00000477554 NT5C1B-RDH14C9J2C7 533 aa19.55■□□□□ 0.72
PTPN7-209ENST00000477554 EYA4O95677 639 aa19.55■□□□□ 0.72
PTPN7-209ENST00000477554 RB1P06400 928 aa19.55■□□□□ 0.72
PTPN7-209ENST00000477554 MARCKSP29966 332 aaPredicted RBP19.55■□□□□ 0.72
PTPN7-209ENST00000477554 MAPK7Q13164 816 aa19.55■□□□□ 0.72
PTPN7-209ENST00000477554 C11orf84Q9BUA3 381 aaPredicted RBP19.55■□□□□ 0.72
PTPN7-209ENST00000477554 TRAIPQ9BWF2 469 aa19.55■□□□□ 0.72
PTPN7-209ENST00000477554 CXCL16Q9H2A7 254 aa19.55■□□□□ 0.72
PTPN7-209ENST00000477554 LMCD1Q9NZU5 365 aa19.55■□□□□ 0.72
PTPN7-209ENST00000477554 THEGQ9P2T0 379 aa19.55■□□□□ 0.72
PTPN7-209ENST00000477554 ZDHHC9Q9Y397 364 aa19.55■□□□□ 0.72
PTPN7-209ENST00000477554 OFD1O75665 1012 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms