RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 CYP26B1Q9NR63 512 aa11.07□□□□□ -0.64
COL4A5-204ENST00000477429 SLC12A7Q9Y666 1083 aa11.07□□□□□ -0.64
COL4A5-204ENST00000477429 C2orf16Q68DN1 1984 aa11.07□□□□□ -0.64
COL4A5-204ENST00000477429 DSPP15924 2871 aaKnown RBP11.06□□□□□ -0.64
COL4A5-204ENST00000477429 POTEMA6NI47 508 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 F8W810 466 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 LILRB3O75022 631 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 LRRN2O75325 713 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 DDHD2O94830 711 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 SSBP05455 408 aaKnown RBP eCLIP11.06□□□□□ -0.64
COL4A5-204ENST00000477429 GALTP07902 379 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 CFHP08603 1231 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 CNPP09543 421 aaKnown RBP11.06□□□□□ -0.64
COL4A5-204ENST00000477429 CLCN4P51793 760 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 TDGQ13569 410 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 NECTIN1Q15223 517 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 CREB3L3Q68CJ9 461 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 APOA5Q6Q788 366 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 DDX53Q86TM3 631 aaKnown RBP11.06□□□□□ -0.64
COL4A5-204ENST00000477429 SGMS1Q86VZ5 419 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 ABI1Q8IZP0 508 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 FAM212AQ96EL1 285 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 TMEM87BQ96K49 555 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 KLHL5Q96PQ7 755 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 ZNF577Q9BSK1 485 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 TBC1D13Q9NVG8 400 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 BARHL2Q9NY43 387 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 DUSP12Q9UNI6 340 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 USTQ9Y2C2 406 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 IRAK3Q9Y616 596 aa11.06□□□□□ -0.64
COL4A5-204ENST00000477429 HOXA2O43364 376 aa11.05□□□□□ -0.64
COL4A5-204ENST00000477429 OFD1O75665 1012 aa11.05□□□□□ -0.64
COL4A5-204ENST00000477429 CYP3A4P08684 503 aa11.05□□□□□ -0.64
COL4A5-204ENST00000477429 GLULP15104 373 aa11.05□□□□□ -0.64
COL4A5-204ENST00000477429 ZSCAN20P17040 1043 aaPredicted RBP11.05□□□□□ -0.64
COL4A5-204ENST00000477429 ZNF76P36508 570 aa11.05□□□□□ -0.64
COL4A5-204ENST00000477429 PHKA2P46019 1235 aa11.05□□□□□ -0.64
COL4A5-204ENST00000477429 ATXN1P54253 815 aaKnown RBP11.05□□□□□ -0.64
COL4A5-204ENST00000477429 PRKCEQ02156 737 aa11.05□□□□□ -0.64
COL4A5-204ENST00000477429 TARBP2Q15633 366 aaKnown RBP11.05□□□□□ -0.64
COL4A5-204ENST00000477429 ODR4Q5SWX8 454 aa11.05□□□□□ -0.64
COL4A5-204ENST00000477429 CABP7Q86V35 215 aa11.05□□□□□ -0.64
COL4A5-204ENST00000477429 KSR1Q8IVT5 923 aa11.05□□□□□ -0.64
COL4A5-204ENST00000477429 RUFY2Q8WXA3 655 aa11.05□□□□□ -0.64
COL4A5-204ENST00000477429 TMEM169Q96HH4 297 aa11.05□□□□□ -0.64
COL4A5-204ENST00000477429 MYADMQ96S97 322 aa11.05□□□□□ -0.64
COL4A5-204ENST00000477429 MTA3Q9BTC8 594 aa11.05□□□□□ -0.64
COL4A5-204ENST00000477429 GBP3Q9H0R5 595 aa11.05□□□□□ -0.64
COL4A5-204ENST00000477429 DZANK1Q9NVP4 752 aa11.05□□□□□ -0.64
COL4A5-204ENST00000477429 DLGAP2Q9P1A6 1054 aa11.05□□□□□ -0.64
COL4A5-204ENST00000477429 INPP5FQ9Y2H2 1132 aa11.05□□□□□ -0.64
COL4A5-204ENST00000477429 GTF3C3Q9Y5Q9 886 aa11.05□□□□□ -0.64
COL4A5-204ENST00000477429 A0A087WZ62 844 aa11.04□□□□□ -0.64
COL4A5-204ENST00000477429 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.04□□□□□ -0.64
COL4A5-204ENST00000477429 FOSP01100 380 aaPredicted RBP11.04□□□□□ -0.64
COL4A5-204ENST00000477429 OATP04181 439 aa11.04□□□□□ -0.64
COL4A5-204ENST00000477429 DCNP07585 359 aaKnown RBP11.04□□□□□ -0.64
COL4A5-204ENST00000477429 CALM1P0DP23 149 aa11.04□□□□□ -0.64
COL4A5-204ENST00000477429 CALM2P0DP24 149 aa11.04□□□□□ -0.64
COL4A5-204ENST00000477429 CALM3P0DP25 149 aa11.04□□□□□ -0.64
COL4A5-204ENST00000477429 ALDH7A1P49419 539 aaKnown RBP11.04□□□□□ -0.64
COL4A5-204ENST00000477429 EXOSC10Q01780 885 aaKnown RBP11.04□□□□□ -0.64
COL4A5-204ENST00000477429 ADCK5Q3MIX3 580 aa11.04□□□□□ -0.64
COL4A5-204ENST00000477429 PRR16Q569H4 304 aa11.04□□□□□ -0.64
COL4A5-204ENST00000477429 ZNF746Q6NUN9 644 aaPredicted RBP11.04□□□□□ -0.64
COL4A5-204ENST00000477429 PPP1R18Q6NYC8 613 aa11.04□□□□□ -0.64
COL4A5-204ENST00000477429 AGMOQ6ZNB7 445 aa11.04□□□□□ -0.64
COL4A5-204ENST00000477429 SKAP1Q86WV1 359 aa11.04□□□□□ -0.64
COL4A5-204ENST00000477429 MAML2Q8IZL2 1156 aaPredicted RBP11.04□□□□□ -0.64
COL4A5-204ENST00000477429 TMTC2Q8N394 836 aa11.04□□□□□ -0.64
COL4A5-204ENST00000477429 FDXACB1Q9BRP7 624 aaPredicted RBP11.04□□□□□ -0.64
COL4A5-204ENST00000477429 CA14Q9ULX7 337 aa11.04□□□□□ -0.64
COL4A5-204ENST00000477429 PCDHA10Q9Y5I2 948 aa11.04□□□□□ -0.64
COL4A5-204ENST00000477429 IGF2RP11717 2491 aa11.04□□□□□ -0.64
COL4A5-204ENST00000477429 ITPR1Q14643 2758 aa11.04□□□□□ -0.64
COL4A5-204ENST00000477429 MSH4O15457 936 aa11.03□□□□□ -0.64
COL4A5-204ENST00000477429 MAGEB2O15479 319 aa11.03□□□□□ -0.64
COL4A5-204ENST00000477429 RFPL2O75678 378 aa11.03□□□□□ -0.64
COL4A5-204ENST00000477429 PSAPP07602 524 aa11.03□□□□□ -0.64
COL4A5-204ENST00000477429 SPATA31D3P0C874 917 aa11.03□□□□□ -0.64
COL4A5-204ENST00000477429 ADD1P35611 737 aaKnown RBP11.03□□□□□ -0.64
COL4A5-204ENST00000477429 POLGP54098 1239 aaPredicted RBP11.03□□□□□ -0.64
COL4A5-204ENST00000477429 AP3B2Q13367 1082 aa11.03□□□□□ -0.64
COL4A5-204ENST00000477429 LETM2Q2VYF4 491 aa11.03□□□□□ -0.64
COL4A5-204ENST00000477429 NOMO2Q5JPE7 1267 aa11.03□□□□□ -0.64
COL4A5-204ENST00000477429 SPECC1Q5M775 1068 aa11.03□□□□□ -0.64
COL4A5-204ENST00000477429 KIAA0319Q5VV43 1072 aa11.03□□□□□ -0.64
COL4A5-204ENST00000477429 SPATA31D4Q6ZUB0 917 aa11.03□□□□□ -0.64
COL4A5-204ENST00000477429 CCDC149Q6ZUS6 474 aa11.03□□□□□ -0.64
COL4A5-204ENST00000477429 RASEFQ8IZ41 740 aa11.03□□□□□ -0.64
COL4A5-204ENST00000477429 SLC44A3Q8N4M1 653 aa11.03□□□□□ -0.64
COL4A5-204ENST00000477429 ZNF579Q8NAF0 562 aaKnown RBP11.03□□□□□ -0.64
COL4A5-204ENST00000477429 NLRP7Q8WX94 980 aa11.03□□□□□ -0.64
COL4A5-204ENST00000477429 ZNF707Q96C28 371 aaPredicted RBP11.03□□□□□ -0.64
COL4A5-204ENST00000477429 MAP7D2Q96T17 732 aa11.03□□□□□ -0.64
COL4A5-204ENST00000477429 RPP25Q9BUL9 199 aaKnown RBP11.03□□□□□ -0.64
COL4A5-204ENST00000477429 UNC45AQ9H3U1 944 aa11.03□□□□□ -0.64
COL4A5-204ENST00000477429 SFXN1Q9H9B4 322 aa11.03□□□□□ -0.64
COL4A5-204ENST00000477429 MARCH5Q9NX47 278 aa11.03□□□□□ -0.64
COL4A5-204ENST00000477429 FBXL21Q9UKT6 434 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms