RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 HLA-CQ95604 372 aa17.31■□□□□ 0.36
COMMD6-209ENST00000477377 FAM105AQ9NUU6 356 aa17.31■□□□□ 0.36
COMMD6-209ENST00000477377 RNF216Q9NWF9 866 aaPredicted RBP17.31■□□□□ 0.36
COMMD6-209ENST00000477377 PIN4Q9Y237 131 aaKnown RBP17.31■□□□□ 0.36
COMMD6-209ENST00000477377 BRWD1Q9NSI6 2320 aa17.3■□□□□ 0.36
COMMD6-209ENST00000477377 LAD1O00515 517 aa17.3■□□□□ 0.36
COMMD6-209ENST00000477377 USO1O60763 962 aaKnown RBP17.3■□□□□ 0.36
COMMD6-209ENST00000477377 CDC25AP30304 524 aa17.3■□□□□ 0.36
COMMD6-209ENST00000477377 MRPL10Q7Z7H8 261 aaKnown RBP17.3■□□□□ 0.36
COMMD6-209ENST00000477377 COLGALT1Q8NBJ5 622 aa17.3■□□□□ 0.36
COMMD6-209ENST00000477377 HELQQ8TDG4 1101 aa17.3■□□□□ 0.36
COMMD6-209ENST00000477377 POF1BQ8WVV4 589 aa17.3■□□□□ 0.36
COMMD6-209ENST00000477377 BSNDQ8WZ55 320 aa17.3■□□□□ 0.36
COMMD6-209ENST00000477377 NFKBIZQ9BYH8 718 aa17.3■□□□□ 0.36
COMMD6-209ENST00000477377 POLR3FQ9H1D9 316 aaPredicted RBP17.3■□□□□ 0.36
COMMD6-209ENST00000477377 NSUN3Q9H649 340 aaKnown RBP17.3■□□□□ 0.36
COMMD6-209ENST00000477377 LRWD1Q9UFC0 647 aa17.3■□□□□ 0.36
COMMD6-209ENST00000477377 PLXNA4Q9HCM2 1894 aa17.3■□□□□ 0.36
COMMD6-209ENST00000477377 H3BQV1 296 aa17.29■□□□□ 0.36
COMMD6-209ENST00000477377 TSPAN1O60635 241 aa17.29■□□□□ 0.36
COMMD6-209ENST00000477377 OFD1O75665 1012 aa17.29■□□□□ 0.36
COMMD6-209ENST00000477377 CYP11B2P19099 503 aa17.29■□□□□ 0.36
COMMD6-209ENST00000477377 GTF2F1P35269 517 aaKnown RBP eCLIP17.29■□□□□ 0.36
COMMD6-209ENST00000477377 AFF1P51825 1210 aaKnown RBP17.29■□□□□ 0.36
COMMD6-209ENST00000477377 CTC1Q2NKJ3 1217 aa17.29■□□□□ 0.36
COMMD6-209ENST00000477377 TIGD5Q53EQ6 642 aa17.29■□□□□ 0.36
COMMD6-209ENST00000477377 TWF2Q6IBS0 349 aaKnown RBP17.29■□□□□ 0.36
COMMD6-209ENST00000477377 PADI6Q6TGC4 694 aa17.29■□□□□ 0.36
COMMD6-209ENST00000477377 AGMOQ6ZNB7 445 aa17.29■□□□□ 0.36
COMMD6-209ENST00000477377 MAEAQ7L5Y9 396 aa17.29■□□□□ 0.36
COMMD6-209ENST00000477377 KCNK18Q7Z418 384 aa17.29■□□□□ 0.36
COMMD6-209ENST00000477377 ERMNQ8TAM6 284 aa17.29■□□□□ 0.36
COMMD6-209ENST00000477377 KIAA1024Q9UPX6 916 aa17.29■□□□□ 0.36
COMMD6-209ENST00000477377 PCDHGC5Q9Y5F6 944 aa17.29■□□□□ 0.36
COMMD6-209ENST00000477377 HOXA2O43364 376 aa17.28■□□□□ 0.36
COMMD6-209ENST00000477377 LTBRP36941 435 aa17.28■□□□□ 0.36
COMMD6-209ENST00000477377 CCT6AP40227 531 aaKnown RBP17.28■□□□□ 0.36
COMMD6-209ENST00000477377 PBX3P40426 434 aa17.28■□□□□ 0.36
COMMD6-209ENST00000477377 HYAL1Q12794 435 aa17.28■□□□□ 0.36
COMMD6-209ENST00000477377 LONRF3Q496Y0 759 aa17.28■□□□□ 0.36
COMMD6-209ENST00000477377 HAUS3Q68CZ6 603 aa17.28■□□□□ 0.36
COMMD6-209ENST00000477377 ADGRD2Q7Z7M1 963 aa17.28■□□□□ 0.36
COMMD6-209ENST00000477377 RNF169Q8NCN4 708 aa17.28■□□□□ 0.36
COMMD6-209ENST00000477377 SMG8Q8ND04 991 aaKnown RBP17.28■□□□□ 0.36
COMMD6-209ENST00000477377 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.28■□□□□ 0.36
COMMD6-209ENST00000477377 PNMA5Q96PV4 448 aa17.28■□□□□ 0.36
COMMD6-209ENST00000477377 EIF2AQ9BY44 585 aaKnown RBP17.28■□□□□ 0.36
COMMD6-209ENST00000477377 UBE2ZQ9H832 354 aaPredicted RBP17.28■□□□□ 0.36
COMMD6-209ENST00000477377 POLD4Q9HCU8 107 aa17.28■□□□□ 0.36
COMMD6-209ENST00000477377 PCDHB2Q9Y5E7 798 aa17.28■□□□□ 0.36
COMMD6-209ENST00000477377 TTLL13PA6NNM8 815 aa17.27■□□□□ 0.36
COMMD6-209ENST00000477377 E9PMD0 336 aa17.27■□□□□ 0.36
COMMD6-209ENST00000477377 FSCN2O14926 492 aa17.27■□□□□ 0.36
COMMD6-209ENST00000477377 B4GALT5O43286 388 aa17.27■□□□□ 0.36
COMMD6-209ENST00000477377 B4GALT3O60512 393 aa17.27■□□□□ 0.36
COMMD6-209ENST00000477377 FGF18O76093 207 aa17.27■□□□□ 0.36
COMMD6-209ENST00000477377 ARF4P18085 180 aaPredicted RBP17.27■□□□□ 0.36
COMMD6-209ENST00000477377 ERVFC1P60507 584 aa17.27■□□□□ 0.36
COMMD6-209ENST00000477377 PLCB3Q01970 1234 aa17.27■□□□□ 0.36
COMMD6-209ENST00000477377 HYIQ5T013 277 aa17.27■□□□□ 0.36
COMMD6-209ENST00000477377 CDCA2Q69YH5 1023 aaPredicted RBP17.27■□□□□ 0.36
COMMD6-209ENST00000477377 KCNT2Q6UVM3 1135 aa17.27■□□□□ 0.36
COMMD6-209ENST00000477377 DTHD1Q6ZMT9 781 aa17.27■□□□□ 0.36
COMMD6-209ENST00000477377 LRRC43Q8N309 656 aa17.27■□□□□ 0.36
COMMD6-209ENST00000477377 SNX29Q8TEQ0 813 aa17.27■□□□□ 0.36
COMMD6-209ENST00000477377 CPB2Q96IY4 423 aa17.27■□□□□ 0.36
COMMD6-209ENST00000477377 BHMT2Q9H2M3 363 aa17.27■□□□□ 0.36
COMMD6-209ENST00000477377 DDX19AQ9NUU7 478 aaKnown RBP17.27■□□□□ 0.36
COMMD6-209ENST00000477377 PCDHB12Q9Y5F1 795 aa17.27■□□□□ 0.36
COMMD6-209ENST00000477377 TCF20Q9UGU0 1960 aaKnown RBP17.27■□□□□ 0.36
COMMD6-209ENST00000477377 EDN1P05305 212 aa17.26■□□□□ 0.35
COMMD6-209ENST00000477377 SKIP12755 728 aa17.26■□□□□ 0.35
COMMD6-209ENST00000477377 LAG3P18627 525 aa17.26■□□□□ 0.35
COMMD6-209ENST00000477377 RAB27AP51159 221 aa17.26■□□□□ 0.35
COMMD6-209ENST00000477377 DLX2Q07687 328 aaPredicted RBP17.26■□□□□ 0.35
COMMD6-209ENST00000477377 TFDP1Q14186 410 aa17.26■□□□□ 0.35
COMMD6-209ENST00000477377 PCBP1Q15365 356 aaKnown RBP eCLIP17.26■□□□□ 0.35
COMMD6-209ENST00000477377 MCPH1Q8NEM0 835 aa17.26■□□□□ 0.35
COMMD6-209ENST00000477377 ADAMTS19Q8TE59 1207 aa17.26■□□□□ 0.35
COMMD6-209ENST00000477377 SYMPKQ92797 1274 aaKnown RBP17.26■□□□□ 0.35
COMMD6-209ENST00000477377 PABPC5Q96DU9 382 aaKnown RBP17.26■□□□□ 0.35
COMMD6-209ENST00000477377 NECAB3Q96P71 396 aaPredicted RBP17.26■□□□□ 0.35
COMMD6-209ENST00000477377 RNF39Q9H2S5 420 aa17.26■□□□□ 0.35
COMMD6-209ENST00000477377 FZD8Q9H461 694 aa17.26■□□□□ 0.35
COMMD6-209ENST00000477377 A0A1B0GUA9 196 aa17.25■□□□□ 0.35
COMMD6-209ENST00000477377 ARHGEF35A5YM69 484 aa17.25■□□□□ 0.35
COMMD6-209ENST00000477377 INO80B-WBP1J3KQ70 363 aa17.25■□□□□ 0.35
COMMD6-209ENST00000477377 CSPG5O95196 566 aa17.25■□□□□ 0.35
COMMD6-209ENST00000477377 EYA4O95677 639 aa17.25■□□□□ 0.35
COMMD6-209ENST00000477377 NCLP19338 710 aaKnown RBP17.25■□□□□ 0.35
COMMD6-209ENST00000477377 SYT1P21579 422 aa17.25■□□□□ 0.35
COMMD6-209ENST00000477377 AXLP30530 894 aa17.25■□□□□ 0.35
COMMD6-209ENST00000477377 UBE3AQ05086 875 aa17.25■□□□□ 0.35
COMMD6-209ENST00000477377 GRIN1Q05586 938 aa17.25■□□□□ 0.35
COMMD6-209ENST00000477377 LEXMQ3ZCV2 418 aa17.25■□□□□ 0.35
COMMD6-209ENST00000477377 SPOUT1Q5T280 376 aaKnown RBP17.25■□□□□ 0.35
COMMD6-209ENST00000477377 ARL6IP4Q66PJ3 421 aaKnown RBP17.25■□□□□ 0.35
COMMD6-209ENST00000477377 PPP4R3CPQ6ZMV5 832 aa17.25■□□□□ 0.35
COMMD6-209ENST00000477377 TMEM173Q86WV6 379 aaPredicted RBP17.25■□□□□ 0.35
COMMD6-209ENST00000477377 ABI1Q8IZP0 508 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms