RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	HTRA3	P83110	453 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	CXCL9	Q07325	125 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	MAP3K12	Q12852	859 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	COL9A2	Q14055	689 aa	Predicted RBP	5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	DLGAP5	Q15398	846 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	GNPTAB	Q3T906	1256 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	MFSD14B	Q5SR56	506 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	ZFYVE27	Q5T4F4	411 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	TMED8	Q6PL24	325 aa	Predicted RBP	5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	CHD1L	Q86WJ1	897 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	CERS3	Q8IU89	383 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	ADGRG2	Q8IZP9	1017 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	VGLL2	Q8N8G2	317 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	SPATA5	Q8NB90	893 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	TDRD7	Q8NHU6	1098 aa	Known RBP	5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	KLHL6	Q8WZ60	621 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	GPR101	Q96P66	508 aa	Predicted RBP	5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	DNAJC2	Q99543	621 aa	Known RBP	5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	RXFP1	Q9HBX9	757 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	ECHDC1	Q9NTX5	307 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	RAI14	Q9P0K7	980 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	CNOT7	Q9UIV1	285 aa	Known RBP	5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	EFR3B	Q9Y2G0	817 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	TTC41P	Q6P2S7	1318 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	SPEF2	Q9C093	1822 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	FER1L6	Q2WGJ9	1857 aa		5.41	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	LRRC37A	A6NMS7	1700 aa		5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289		A0A1B0GTL3	188 aa		5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	SNAP23	O00161	211 aa		5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	STXBP3	O00186	592 aa		5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	GLRX3	O76003	335 aa	Known RBP	5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	BAG3	O95817	575 aa		5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	EPHX1	P07099	455 aa		5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	ASGR2	P07307	311 aa		5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	VIL1	P09327	827 aa	Known RBP	5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	MX1	P20591	662 aa		5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	PHKA1	P46020	1223 aa		5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	GMPS	P49915	693 aa	Predicted RBP	5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	MFAP1	P55081	439 aa	Known RBP	5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	ZXDA	P98168	799 aa		5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	KRTAP1-1	Q07627	177 aa		5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	DLX2	Q07687	328 aa	Predicted RBP	5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	EEF1DP3	Q658K8	133 aa		5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	CASC1	Q6TDU7	716 aa		5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	USP50	Q70EL3	339 aa	Predicted RBP	5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	ZNF654	Q8IZM8	581 aa		5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	C19orf47	Q8N9M1	422 aa	Known RBP	5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	TEKT1	Q969V4	418 aa		5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	DCPS	Q96C86	337 aa	Known RBP	5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	EAF2	Q96CJ1	260 aa	Predicted RBP	5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	RNF38	Q9H0F5	515 aa		5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	BCAS3	Q9H6U6	928 aa		5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	ADARB2	Q9NS39	739 aa	Known RBP	5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	SUSD2	Q9UGT4	822 aa		5.4	□□□□□ -1.54
NSMCE4A-208	ENST00000477289	TAF1	P21675	1872 aa		5.4	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	PDS5A	Q29RF7	1337 aa	Known RBP	5.4	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	FAM205A	Q6ZU69	1335 aa		5.4	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	CHD4	Q14839	1912 aa		5.4	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	ZNF609	O15014	1411 aa		5.4	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	HIP1	O00291	1037 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	SMARCA5	O60264	1052 aa	Predicted RBP	5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	EIF5B	O60841	1220 aa	Known RBP	5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	IDH1	O75874	414 aa	Known RBP	5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	ATP5J	P18859	108 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	TNFRSF1A	P19438	455 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	ADORA1	P30542	326 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	EPHX2	P34913	555 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	NF2	P35240	595 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	HDLBP	Q00341	1268 aa	Known RBP	5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	NUCB1	Q02818	461 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	TNFAIP1	Q13829	316 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	RASGRF1	Q13972	1273 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	UBXN11	Q5T124	520 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	NAA16	Q6N069	864 aa	Predicted RBP	5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	LIPI	Q6XZB0	460 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	SAPCD2	Q86UD0	394 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	SMC5	Q8IY18	1101 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	AMOTL1	Q8IY63	956 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	CNTROB	Q8N137	903 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	RASGRP4	Q8TDF6	673 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	HOOK2	Q96ED9	719 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	FGD4	Q96M96	766 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	MTA3	Q9BTC8	594 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	LNPK	Q9C0E8	428 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	BOLA2	Q9H3K6	86 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	PAG1	Q9NWQ8	432 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	GPRC5D	Q9NZD1	345 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	CGGBP1	Q9UFW8	167 aa	Predicted RBP	5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	RWDD3	Q9Y3V2	267 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	SLC12A7	Q9Y666	1083 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	ZNF541	Q9H0D2	1346 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	SALL1	Q9NSC2	1324 aa		5.39	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	YDJC	A8MPS7	323 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	GOLIM4	O00461	696 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	SCAMP3	O14828	347 aa	Known RBP	5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	MAP4K4	O95819	1239 aa	Predicted RBP	5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	IGHD	P01880	384 aa		5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	ZFY	P08048	801 aa	Predicted RBP	5.38	□□□□□ -1.55
NSMCE4A-208	ENST00000477289	NCAM1	P13591	858 aa		5.38	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms