RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 GRK3P35626 688 aa7.97□□□□□ -1.13
LRCH3-215ENST00000476664 AGFG1P52594 562 aaKnown RBP7.97□□□□□ -1.13
LRCH3-215ENST00000476664 IRF9Q00978 393 aa7.97□□□□□ -1.13
LRCH3-215ENST00000476664 SRSF2Q01130 221 aaKnown RBP7.97□□□□□ -1.13
LRCH3-215ENST00000476664 PTSQ03393 145 aa7.97□□□□□ -1.13
LRCH3-215ENST00000476664 TTLL4Q14679 1199 aa7.97□□□□□ -1.13
LRCH3-215ENST00000476664 TAF12Q16514 161 aa7.97□□□□□ -1.13
LRCH3-215ENST00000476664 HSF5Q4G112 596 aaPredicted RBP7.97□□□□□ -1.13
LRCH3-215ENST00000476664 FKBP15Q5T1M5 1219 aa7.97□□□□□ -1.13
LRCH3-215ENST00000476664 MAP4K3Q8IVH8 894 aa7.97□□□□□ -1.13
LRCH3-215ENST00000476664 KSR1Q8IVT5 923 aa7.97□□□□□ -1.13
LRCH3-215ENST00000476664 FERMT2Q96AC1 680 aa7.97□□□□□ -1.13
LRCH3-215ENST00000476664 ZC3H10Q96K80 434 aaKnown RBP7.97□□□□□ -1.13
LRCH3-215ENST00000476664 PIDD1Q9HB75 910 aa7.97□□□□□ -1.13
LRCH3-215ENST00000476664 RNF181Q9P0P0 153 aa7.97□□□□□ -1.13
LRCH3-215ENST00000476664 MAGED2Q9UNF1 606 aaPredicted RBP7.97□□□□□ -1.13
LRCH3-215ENST00000476664 CRYL1Q9Y2S2 319 aa7.97□□□□□ -1.13
LRCH3-215ENST00000476664 TMEM98Q9Y2Y6 226 aa7.97□□□□□ -1.13
LRCH3-215ENST00000476664 CPDO75976 1380 aa7.97□□□□□ -1.13
LRCH3-215ENST00000476664 ABCC11Q96J66 1382 aa7.97□□□□□ -1.13
LRCH3-215ENST00000476664 ANKARQ7Z5J8 1434 aa7.96□□□□□ -1.13
LRCH3-215ENST00000476664 ADAMTS7Q9UKP4 1686 aa7.96□□□□□ -1.13
LRCH3-215ENST00000476664 H0Y8X5 98 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 AURKAO14965 403 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 KPNA5O15131 536 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 GSNP06396 782 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 CD3EP07766 207 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 DHRS4L1P0CG22 281 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 ADH6P28332 368 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 NOP2P46087 812 aaKnown RBP7.96□□□□□ -1.14
LRCH3-215ENST00000476664 SEPHS1P49903 392 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 MAPK10P53779 464 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 SLC5A3P53794 718 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 ALDH6A1Q02252 535 aaKnown RBP7.96□□□□□ -1.14
LRCH3-215ENST00000476664 MAP2K1Q02750 393 aaPredicted RBP7.96□□□□□ -1.14
LRCH3-215ENST00000476664 GRIK5Q16478 980 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 FSCN1Q16658 493 aaKnown RBP7.96□□□□□ -1.14
LRCH3-215ENST00000476664 TOR2AQ5JU69 321 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 FAM209BQ5JX69 171 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 ZKSCAN2Q63HK3 967 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 TOM1L2Q6ZVM7 507 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 ARMCX6Q7L4S7 300 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 DAAM2Q86T65 1068 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.96□□□□□ -1.14
LRCH3-215ENST00000476664 FAM26EQ8N5C1 309 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 NUP133Q8WUM0 1156 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 NUDT8Q8WV74 236 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 TRAPPC12Q8WVT3 735 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 ISL2Q96A47 359 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 TMEM41AQ96HV5 264 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 ZSCAN31Q96LW9 406 aaPredicted RBP7.96□□□□□ -1.14
LRCH3-215ENST00000476664 SP110Q9HB58 689 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 BLOC1S4Q9NUP1 217 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 TMEFF2Q9UIK5 374 aaPredicted RBP7.96□□□□□ -1.14
LRCH3-215ENST00000476664 CBLCQ9ULV8 474 aa7.96□□□□□ -1.14
LRCH3-215ENST00000476664 ARFGEF1Q9Y6D6 1849 aa7.95□□□□□ -1.14
LRCH3-215ENST00000476664 BICDL2A1A5D9 508 aa7.95□□□□□ -1.14
LRCH3-215ENST00000476664 SIGLEC6O43699 453 aa7.95□□□□□ -1.14
LRCH3-215ENST00000476664 RNGTTO60942 597 aaKnown RBP7.95□□□□□ -1.14
LRCH3-215ENST00000476664 OSMP13725 252 aa7.95□□□□□ -1.14
LRCH3-215ENST00000476664 KRT9P35527 623 aa7.95□□□□□ -1.14
LRCH3-215ENST00000476664 ZEB1P37275 1124 aaPredicted RBP7.95□□□□□ -1.14
LRCH3-215ENST00000476664 STARD3Q14849 445 aa7.95□□□□□ -1.14
LRCH3-215ENST00000476664 RFX8Q6ZV50 586 aa7.95□□□□□ -1.14
LRCH3-215ENST00000476664 SYDE1Q6ZW31 735 aaPredicted RBP7.95□□□□□ -1.14
LRCH3-215ENST00000476664 TRIM46Q7Z4K8 759 aa7.95□□□□□ -1.14
LRCH3-215ENST00000476664 UBE3DQ7Z6J8 389 aa7.95□□□□□ -1.14
LRCH3-215ENST00000476664 CCDC103Q8IW40 242 aa7.95□□□□□ -1.14
LRCH3-215ENST00000476664 ZNF527Q8NB42 609 aa7.95□□□□□ -1.14
LRCH3-215ENST00000476664 COA7Q96BR5 231 aa7.95□□□□□ -1.14
LRCH3-215ENST00000476664 PPP1R16BQ96T49 567 aa7.95□□□□□ -1.14
LRCH3-215ENST00000476664 LRRC27Q9C0I9 530 aa7.95□□□□□ -1.14
LRCH3-215ENST00000476664 JPH1Q9HDC5 661 aaPredicted RBP7.95□□□□□ -1.14
LRCH3-215ENST00000476664 ALG13Q9NP73 1137 aaKnown RBP7.95□□□□□ -1.14
LRCH3-215ENST00000476664 DCP1AQ9NPI6 582 aaPredicted RBP7.95□□□□□ -1.14
LRCH3-215ENST00000476664 ACSS2Q9NR19 701 aa7.95□□□□□ -1.14
LRCH3-215ENST00000476664 CHST7Q9NS84 486 aa7.95□□□□□ -1.14
LRCH3-215ENST00000476664 USP36Q9P275 1121 aaKnown RBP7.95□□□□□ -1.14
LRCH3-215ENST00000476664 AP4E1Q9UPM8 1137 aa7.95□□□□□ -1.14
LRCH3-215ENST00000476664 SNX13Q9Y5W8 968 aa7.95□□□□□ -1.14
LRCH3-215ENST00000476664 LY75O60449 1722 aa7.95□□□□□ -1.14
LRCH3-215ENST00000476664 PPLO60437 1756 aa7.94□□□□□ -1.14
LRCH3-215ENST00000476664 BRCA1P38398 1863 aaKnown RBP7.94□□□□□ -1.14
LRCH3-215ENST00000476664 MYO1BO43795 1136 aa7.94□□□□□ -1.14
LRCH3-215ENST00000476664 DLGAP3O95886 979 aa7.94□□□□□ -1.14
LRCH3-215ENST00000476664 CYP17A1P05093 508 aa7.94□□□□□ -1.14
LRCH3-215ENST00000476664 ZBTB48P10074 688 aaPredicted RBP7.94□□□□□ -1.14
LRCH3-215ENST00000476664 LCP1P13796 627 aa7.94□□□□□ -1.14
LRCH3-215ENST00000476664 PLS3P13797 630 aa7.94□□□□□ -1.14
LRCH3-215ENST00000476664 ALAS2P22557 587 aa7.94□□□□□ -1.14
LRCH3-215ENST00000476664 TPP2P29144 1249 aaPredicted RBP7.94□□□□□ -1.14
LRCH3-215ENST00000476664 ELF1P32519 619 aa7.94□□□□□ -1.14
LRCH3-215ENST00000476664 ARL4CP56559 192 aa7.94□□□□□ -1.14
LRCH3-215ENST00000476664 SNW1Q13573 536 aaKnown RBP7.94□□□□□ -1.14
LRCH3-215ENST00000476664 C1QTNF12Q5T7M4 302 aa7.94□□□□□ -1.14
LRCH3-215ENST00000476664 LCE2DQ5TA82 110 aaPredicted RBP7.94□□□□□ -1.14
LRCH3-215ENST00000476664 SPATA1Q5VX52 437 aa7.94□□□□□ -1.14
LRCH3-215ENST00000476664 LETMD1Q6P1Q0 360 aa7.94□□□□□ -1.14
LRCH3-215ENST00000476664 MAEAQ7L5Y9 396 aa7.94□□□□□ -1.14
LRCH3-215ENST00000476664 TBC1D1Q86TI0 1168 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms