RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 FGFR4P22455 802 aa11.34□□□□□ -0.59
CCM2-208ENST00000476594 FAM102BQ5T8I3 360 aa11.34□□□□□ -0.59
CCM2-208ENST00000476594 NOTUMQ6P988 496 aa11.34□□□□□ -0.59
CCM2-208ENST00000476594 BRAPQ7Z569 592 aa11.34□□□□□ -0.59
CCM2-208ENST00000476594 KSR1Q8IVT5 923 aa11.34□□□□□ -0.59
CCM2-208ENST00000476594 KLHL23Q8NBE8 558 aa11.34□□□□□ -0.59
CCM2-208ENST00000476594 SNX29Q8TEQ0 813 aa11.34□□□□□ -0.59
CCM2-208ENST00000476594 IFT74Q96LB3 600 aa11.34□□□□□ -0.59
CCM2-208ENST00000476594 COL25A1Q9BXS0 654 aaPredicted RBP11.34□□□□□ -0.59
CCM2-208ENST00000476594 NFKBIZQ9BYH8 718 aa11.34□□□□□ -0.59
CCM2-208ENST00000476594 TRIM6Q9C030 488 aaPredicted RBP11.34□□□□□ -0.59
CCM2-208ENST00000476594 UBE2ZQ9H832 354 aaPredicted RBP11.34□□□□□ -0.59
CCM2-208ENST00000476594 IFT122Q9HBG6 1241 aa11.34□□□□□ -0.59
CCM2-208ENST00000476594 UBN1Q9NPG3 1134 aa11.34□□□□□ -0.59
CCM2-208ENST00000476594 PRDM6Q9NQX0 595 aa11.34□□□□□ -0.59
CCM2-208ENST00000476594 FAM105AQ9NUU6 356 aa11.34□□□□□ -0.59
CCM2-208ENST00000476594 TYW1Q9NV66 732 aaKnown RBP11.34□□□□□ -0.59
CCM2-208ENST00000476594 STK39Q9UEW8 545 aa11.34□□□□□ -0.59
CCM2-208ENST00000476594 PLAGL2Q9UPG8 496 aa11.34□□□□□ -0.59
CCM2-208ENST00000476594 PHLPP2Q6ZVD8 1323 aa11.34□□□□□ -0.59
CCM2-208ENST00000476594 LRRIQ4A6NIV6 560 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 ZNF623O75123 536 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 MED24O75448 989 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 CSDE1O75534 798 aaKnown RBP11.33□□□□□ -0.6
CCM2-208ENST00000476594 SPATA31C1P0DKV0 1188 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 SRGAP2BP0DMP2 458 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 ALDH7A1P49419 539 aaKnown RBP11.33□□□□□ -0.6
CCM2-208ENST00000476594 GATMP50440 423 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 PTENP60484 403 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 RNASELQ05823 741 aaKnown RBP11.33□□□□□ -0.6
CCM2-208ENST00000476594 TMEM132AQ24JP5 1023 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 ARL6IP4Q66PJ3 421 aaKnown RBP11.33□□□□□ -0.6
CCM2-208ENST00000476594 EP400NLQ6ZTU2 488 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 IFNLR1Q8IU57 520 aaPredicted RBP11.33□□□□□ -0.6
CCM2-208ENST00000476594 ZNF579Q8NAF0 562 aaKnown RBP11.33□□□□□ -0.6
CCM2-208ENST00000476594 COLGALT1Q8NBJ5 622 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 MICAL1Q8TDZ2 1067 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 POF1BQ8WVV4 589 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 KIFAP3Q92845 792 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 PABPC5Q96DU9 382 aaKnown RBP11.33□□□□□ -0.6
CCM2-208ENST00000476594 CDK5RAP3Q96JB5 506 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 PRIMPOLQ96LW4 560 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 NT5C3AQ9H0P0 336 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 POLR3FQ9H1D9 316 aaPredicted RBP11.33□□□□□ -0.6
CCM2-208ENST00000476594 ALG13Q9NP73 1137 aaKnown RBP11.33□□□□□ -0.6
CCM2-208ENST00000476594 XPNPEP1Q9NQW7 623 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.33□□□□□ -0.6
CCM2-208ENST00000476594 FOXD4L1Q9NU39 408 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 KANSL3Q9P2N6 904 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 KCNG1Q9UIX4 513 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 DNM3Q9UQ16 869 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 LZTS1Q9Y250 596 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 PCDHB6Q9Y5E3 794 aa11.33□□□□□ -0.6
CCM2-208ENST00000476594 ARID2Q68CP9 1835 aa11.32□□□□□ -0.6
CCM2-208ENST00000476594 ZBTB39O15060 712 aa11.32□□□□□ -0.6
CCM2-208ENST00000476594 GRM6O15303 877 aa11.32□□□□□ -0.6
CCM2-208ENST00000476594 FGF18O76093 207 aa11.32□□□□□ -0.6
CCM2-208ENST00000476594 CD2BP2O95400 341 aaKnown RBP11.32□□□□□ -0.6
CCM2-208ENST00000476594 ITGB1P05556 798 aa11.32□□□□□ -0.6
CCM2-208ENST00000476594 LINC00271P0C7V0 271 aa11.32□□□□□ -0.6
CCM2-208ENST00000476594 ARL2P36404 184 aa11.32□□□□□ -0.6
CCM2-208ENST00000476594 CAPSQ13938 189 aa11.32□□□□□ -0.6
CCM2-208ENST00000476594 TCEAL5Q5H9L2 206 aa11.32□□□□□ -0.6
CCM2-208ENST00000476594 POTEGQ6S5H5 508 aa11.32□□□□□ -0.6
CCM2-208ENST00000476594 PADI6Q6TGC4 694 aa11.32□□□□□ -0.6
CCM2-208ENST00000476594 KCNT2Q6UVM3 1135 aa11.32□□□□□ -0.6
CCM2-208ENST00000476594 APBB1IPQ7Z5R6 666 aaPredicted RBP11.32□□□□□ -0.6
CCM2-208ENST00000476594 ZNF598Q86UK7 904 aaKnown RBP11.32□□□□□ -0.6
CCM2-208ENST00000476594 IGSF22Q8N9C0 903 aa11.32□□□□□ -0.6
CCM2-208ENST00000476594 DEPTORQ8TB45 409 aa11.32□□□□□ -0.6
CCM2-208ENST00000476594 SPPL3Q8TCT6 385 aa11.32□□□□□ -0.6
CCM2-208ENST00000476594 HELQQ8TDG4 1101 aa11.32□□□□□ -0.6
CCM2-208ENST00000476594 ADAMTS19Q8TE59 1207 aa11.32□□□□□ -0.6
CCM2-208ENST00000476594 TMEM169Q96HH4 297 aa11.32□□□□□ -0.6
CCM2-208ENST00000476594 CASD1Q96PB1 797 aa11.32□□□□□ -0.6
CCM2-208ENST00000476594 FAM193BQ96PV7 902 aaPredicted RBP11.32□□□□□ -0.6
CCM2-208ENST00000476594 UHRF1Q96T88 793 aaPredicted RBP11.32□□□□□ -0.6
CCM2-208ENST00000476594 TLR9Q9NR96 1032 aa11.32□□□□□ -0.6
CCM2-208ENST00000476594 PRMT7Q9NVM4 692 aaPredicted RBP11.32□□□□□ -0.6
CCM2-208ENST00000476594 SPG21Q9NZD8 308 aa11.32□□□□□ -0.6
CCM2-208ENST00000476594 VPS37CA5D8V6 355 aaPredicted RBP11.31□□□□□ -0.6
CCM2-208ENST00000476594 SLC26A4O43511 780 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 NR1I2O75469 434 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 ITGA4P13612 1032 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 PDIA4P13667 645 aaKnown RBP11.31□□□□□ -0.6
CCM2-208ENST00000476594 CYP11B2P19099 503 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 KCNA5P22460 613 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 GLRA2P23416 452 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 NAMPTP43490 491 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 TOB1P50616 345 aaPredicted RBP11.31□□□□□ -0.6
CCM2-208ENST00000476594 EFNA5P52803 228 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 ATP2C1P98194 919 aaPredicted RBP11.31□□□□□ -0.6
CCM2-208ENST00000476594 PLCB3Q01970 1234 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 CUL4AQ13619 759 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 NBR1Q14596 966 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 MAPK6Q16659 721 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 LEXMQ3ZCV2 418 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 NOMO2Q5JPE7 1267 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 C4orf32Q8N8J7 132 aa11.31□□□□□ -0.6
CCM2-208ENST00000476594 TMEM87AQ8NBN3 555 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms