RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 CLLU1OSQ5K130 101 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 ARHGEF16Q5VV41 709 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 IER5Q5VY09 327 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 BLOC1S2Q6QNY1 142 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 STOX1Q6ZVD7 989 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 RUFY3Q7L099 469 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.39□□□□□ -1.23
CLDN4-205ENST00000476494 DDX53Q86TM3 631 aaKnown RBP7.39□□□□□ -1.23
CLDN4-205ENST00000476494 PPFIBP1Q86W92 1011 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 RASEFQ8IZ41 740 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 BCL7CQ8WUZ0 217 aaPredicted RBP7.39□□□□□ -1.23
CLDN4-205ENST00000476494 TMEM40Q8WWA1 233 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 STAMQ92783 540 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 ZFP91Q96JP5 570 aaPredicted RBP7.39□□□□□ -1.23
CLDN4-205ENST00000476494 JAKMIP1Q96N16 626 aaKnown RBP7.39□□□□□ -1.23
CLDN4-205ENST00000476494 CNNM2Q9H8M5 875 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 ZNF287Q9HBT7 754 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 GPCPD1Q9NPB8 672 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 ANAPC4Q9UJX5 808 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 STX8Q9UNK0 236 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.39□□□□□ -1.23
CLDN4-205ENST00000476494 TRPV2Q9Y5S1 764 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 EVPLQ92817 2033 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 EIF4E1BA6NMX2 242 aaKnown RBP7.38□□□□□ -1.23
CLDN4-205ENST00000476494 E7EWF7 191 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 AXIN1O15169 862 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 NCAM2O15394 837 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 FOXP2O15409 715 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 RFPL2O75678 378 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 EPN2O95208 641 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 PDHBP11177 359 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 HSD17B4P51659 736 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 BCAR1P56945 870 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 SATB1Q01826 763 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 TMEM62Q0P6H9 643 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 PGM5Q15124 567 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 CCDC96Q2M329 555 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 USH1GQ495M9 461 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 RNF43Q68DV7 783 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 METTL7BQ6UX53 244 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 DHX32Q7L7V1 743 aaKnown RBP7.38□□□□□ -1.23
CLDN4-205ENST00000476494 RALYLQ86SE5 291 aaKnown RBP7.38□□□□□ -1.23
CLDN4-205ENST00000476494 FBXL16Q8N461 479 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 C12orf50Q8NA57 414 aaPredicted RBP7.38□□□□□ -1.23
CLDN4-205ENST00000476494 NCOA7Q8NI08 942 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 HNRNPLLQ8WVV9 542 aaKnown RBP7.38□□□□□ -1.23
CLDN4-205ENST00000476494 LRIG1Q96JA1 1093 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 LOXL4Q96JB6 756 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 ZSCAN31Q96LW9 406 aaPredicted RBP7.38□□□□□ -1.23
CLDN4-205ENST00000476494 MTA3Q9BTC8 594 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 KRT23Q9C075 422 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 SMOC1Q9H4F8 434 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 ATP6V0A4Q9HBG4 840 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 SCUBE2Q9NQ36 999 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 PDRG1Q9NUG6 133 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 NOC2LQ9Y3T9 749 aaKnown RBP7.38□□□□□ -1.23
CLDN4-205ENST00000476494 ATG2BQ96BY7 2078 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 MYH6P13533 1939 aa7.38□□□□□ -1.23
CLDN4-205ENST00000476494 C4orf47A7E2U8 309 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 SPATA31C2B4DYI2 1134 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 K7ELQ4 463 aaPredicted RBP7.37□□□□□ -1.23
CLDN4-205ENST00000476494 KRT38O76015 456 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 PAPSS2O95340 614 aaPredicted RBP7.37□□□□□ -1.23
CLDN4-205ENST00000476494 IBSPP21815 317 aaPredicted RBP7.37□□□□□ -1.23
CLDN4-205ENST00000476494 RPS6KB1P23443 525 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 HOXA6P31267 233 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 MCM5P33992 734 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 METAP2P50579 478 aaKnown RBP eCLIP7.37□□□□□ -1.23
CLDN4-205ENST00000476494 ZNF543Q08ER8 600 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 NFX1Q12986 1120 aaKnown RBP7.37□□□□□ -1.23
CLDN4-205ENST00000476494 PPFIA1Q13136 1202 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 TCEAL6Q6IPX3 200 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 MFSD6Q6ZSS7 791 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 TPRG1Q6ZUI0 275 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 CYFIP1Q7L576 1253 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 LONP2Q86WA8 852 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 LRRC43Q8N309 656 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 ZNF843Q8N446 348 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 TCEAL3Q969E4 200 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 IGSF21Q96ID5 467 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 IER2Q9BTL4 223 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 FAM49AQ9H0Q0 323 aaPredicted RBP7.37□□□□□ -1.23
CLDN4-205ENST00000476494 ZNF215Q9UL58 517 aaPredicted RBP7.37□□□□□ -1.23
CLDN4-205ENST00000476494 ST3GAL5Q9UNP4 418 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 LIMCH1Q9UPQ0 1083 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 MTMR7Q9Y216 660 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 PCDHA2Q9Y5H9 948 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 ZFP37Q9Y6Q3 630 aaPredicted RBP7.37□□□□□ -1.23
CLDN4-205ENST00000476494 COL4A2P08572 1712 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 SPTAN1Q13813 2472 aaKnown RBP7.37□□□□□ -1.23
CLDN4-205ENST00000476494 DOPEY1Q5JWR5 2465 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 NUP205Q92621 2012 aa7.37□□□□□ -1.23
CLDN4-205ENST00000476494 ABCB11O95342 1321 aa7.36□□□□□ -1.23
CLDN4-205ENST00000476494 J3QKU1 62 aa7.36□□□□□ -1.23
CLDN4-205ENST00000476494 CDX4O14627 284 aaPredicted RBP7.36□□□□□ -1.23
CLDN4-205ENST00000476494 INPPL1O15357 1258 aa7.36□□□□□ -1.23
CLDN4-205ENST00000476494 RPLP2P05387 115 aaKnown RBP7.36□□□□□ -1.23
CLDN4-205ENST00000476494 FGRP09769 529 aa7.36□□□□□ -1.23
CLDN4-205ENST00000476494 MYCLP12524 364 aaPredicted RBP7.36□□□□□ -1.23
CLDN4-205ENST00000476494 CCR3P51677 355 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms