RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 WRAP73Q9P2S5 460 aaPredicted RBP18.07■□□□□ 0.48
COL1A1-205ENST00000476387 HCSTQ9UBK5 93 aa18.07■□□□□ 0.48
COL1A1-205ENST00000476387 PUF60Q9UHX1 559 aaKnown RBP18.07■□□□□ 0.48
COL1A1-205ENST00000476387 A0A087WZ62 844 aa18.06■□□□□ 0.48
COL1A1-205ENST00000476387 POTEMA6NI47 508 aa18.06■□□□□ 0.48
COL1A1-205ENST00000476387 FSCN2O14926 492 aa18.06■□□□□ 0.48
COL1A1-205ENST00000476387 FGFR4P22455 802 aa18.06■□□□□ 0.48
COL1A1-205ENST00000476387 U2AF2P26368 475 aaKnown RBP eCLIP18.06■□□□□ 0.48
COL1A1-205ENST00000476387 RFC5P40937 340 aa18.06■□□□□ 0.48
COL1A1-205ENST00000476387 NPEPPSP55786 919 aa18.06■□□□□ 0.48
COL1A1-205ENST00000476387 CLLU1OSQ5K130 101 aa18.06■□□□□ 0.48
COL1A1-205ENST00000476387 LRRC55Q6ZSA7 311 aa18.06■□□□□ 0.48
COL1A1-205ENST00000476387 MICAL1Q8TDZ2 1067 aa18.06■□□□□ 0.48
COL1A1-205ENST00000476387 MRPS27Q92552 414 aaKnown RBP18.06■□□□□ 0.48
COL1A1-205ENST00000476387 ZNF558Q96NG5 402 aa18.06■□□□□ 0.48
COL1A1-205ENST00000476387 FDXACB1Q9BRP7 624 aaPredicted RBP18.06■□□□□ 0.48
COL1A1-205ENST00000476387 TLE6Q9H808 572 aa18.06■□□□□ 0.48
COL1A1-205ENST00000476387 C11orf16Q9NQ32 467 aa18.06■□□□□ 0.48
COL1A1-205ENST00000476387 CLEC1BQ9P126 229 aa18.06■□□□□ 0.48
COL1A1-205ENST00000476387 SKIP12755 728 aa18.05■□□□□ 0.48
COL1A1-205ENST00000476387 ATF7P17544 494 aaPredicted RBP18.05■□□□□ 0.48
COL1A1-205ENST00000476387 XKR9Q5GH70 373 aa18.05■□□□□ 0.48
COL1A1-205ENST00000476387 KCNT2Q6UVM3 1135 aa18.05■□□□□ 0.48
COL1A1-205ENST00000476387 RBM23Q86U06 439 aaKnown RBP18.05■□□□□ 0.48
COL1A1-205ENST00000476387 RHPN2Q8IUC4 686 aa18.05■□□□□ 0.48
COL1A1-205ENST00000476387 RNF169Q8NCN4 708 aa18.05■□□□□ 0.48
COL1A1-205ENST00000476387 SMRP1Q8NCR6 262 aa18.05■□□□□ 0.48
COL1A1-205ENST00000476387 ERMNQ8TAM6 284 aa18.05■□□□□ 0.48
COL1A1-205ENST00000476387 MRPL9Q9BYD2 267 aaKnown RBP18.05■□□□□ 0.48
COL1A1-205ENST00000476387 RAPGEFL1Q9UHV5 662 aa18.05■□□□□ 0.48
COL1A1-205ENST00000476387 ARIH1Q9Y4X5 557 aaPredicted RBP18.05■□□□□ 0.48
COL1A1-205ENST00000476387 PCDHGC5Q9Y5F6 944 aa18.05■□□□□ 0.48
COL1A1-205ENST00000476387 DCXO43602 365 aa18.04■□□□□ 0.48
COL1A1-205ENST00000476387 GAS2O43903 313 aaKnown RBP18.04■□□□□ 0.48
COL1A1-205ENST00000476387 CSDE1O75534 798 aaKnown RBP18.04■□□□□ 0.48
COL1A1-205ENST00000476387 SLITRK3O94933 977 aa18.04■□□□□ 0.48
COL1A1-205ENST00000476387 GLP2RO95838 553 aa18.04■□□□□ 0.48
COL1A1-205ENST00000476387 PHKA2P46019 1235 aa18.04■□□□□ 0.48
COL1A1-205ENST00000476387 ERVFC1P60507 584 aa18.04■□□□□ 0.48
COL1A1-205ENST00000476387 KRT17Q04695 432 aa18.04■□□□□ 0.48
COL1A1-205ENST00000476387 EMC2Q15006 297 aa18.04■□□□□ 0.48
COL1A1-205ENST00000476387 DUSP6Q16828 381 aa18.04■□□□□ 0.48
COL1A1-205ENST00000476387 HSD17B14Q9BPX1 270 aa18.04■□□□□ 0.48
COL1A1-205ENST00000476387 DHX33Q9H6R0 707 aaKnown RBP18.04■□□□□ 0.48
COL1A1-205ENST00000476387 NGRNQ9NPE2 291 aaKnown RBP18.04■□□□□ 0.48
COL1A1-205ENST00000476387 BMP2KQ9NSY1 1161 aaPredicted RBP18.04■□□□□ 0.48
COL1A1-205ENST00000476387 SPG21Q9NZD8 308 aa18.04■□□□□ 0.48
COL1A1-205ENST00000476387 C5orf42Q9H799 3197 aa18.03■□□□□ 0.48
COL1A1-205ENST00000476387 CARNS1A5YM72 827 aa18.03■□□□□ 0.48
COL1A1-205ENST00000476387 LYPLA2O95372 231 aa18.03■□□□□ 0.48
COL1A1-205ENST00000476387 TECP42680 631 aa18.03■□□□□ 0.48
COL1A1-205ENST00000476387 RAB27AP51159 221 aa18.03■□□□□ 0.48
COL1A1-205ENST00000476387 NBR1Q14596 966 aa18.03■□□□□ 0.48
COL1A1-205ENST00000476387 ZNF579Q8NAF0 562 aaKnown RBP18.03■□□□□ 0.48
COL1A1-205ENST00000476387 HELQQ8TDG4 1101 aa18.03■□□□□ 0.48
COL1A1-205ENST00000476387 TCP11Q8WWU5 503 aa18.03■□□□□ 0.48
COL1A1-205ENST00000476387 PSPC1Q8WXF1 523 aaKnown RBP18.03■□□□□ 0.48
COL1A1-205ENST00000476387 NLRP4Q96MN2 994 aa18.03■□□□□ 0.48
COL1A1-205ENST00000476387 MTRQ99707 1265 aa18.03■□□□□ 0.48
COL1A1-205ENST00000476387 ANKEF1Q9NU02 776 aa18.03■□□□□ 0.48
COL1A1-205ENST00000476387 BARX2Q9UMQ3 279 aaPredicted RBP18.03■□□□□ 0.48
COL1A1-205ENST00000476387 PIN4Q9Y237 131 aaKnown RBP18.03■□□□□ 0.48
COL1A1-205ENST00000476387 HCN4Q9Y3Q4 1203 aa18.03■□□□□ 0.48
COL1A1-205ENST00000476387 COL4A3BPQ9Y5P4 624 aa18.03■□□□□ 0.48
COL1A1-205ENST00000476387 FAM86C2PA6NEL3 165 aa18.02■□□□□ 0.48
COL1A1-205ENST00000476387 PRR33A8MZF0 331 aa18.02■□□□□ 0.48
COL1A1-205ENST00000476387 ZNF623O75123 536 aa18.02■□□□□ 0.48
COL1A1-205ENST00000476387 SRGAP2BP0DMP2 458 aa18.02■□□□□ 0.48
COL1A1-205ENST00000476387 HAUS3Q68CZ6 603 aa18.02■□□□□ 0.48
COL1A1-205ENST00000476387 TWF2Q6IBS0 349 aaKnown RBP18.02■□□□□ 0.48
COL1A1-205ENST00000476387 CATSPER4Q7RTX7 472 aa18.02■□□□□ 0.48
COL1A1-205ENST00000476387 KSR1Q8IVT5 923 aa18.02■□□□□ 0.48
COL1A1-205ENST00000476387 SLC39A11Q8N1S5 342 aa18.02■□□□□ 0.48
COL1A1-205ENST00000476387 TCF25Q9BQ70 676 aa18.02■□□□□ 0.48
COL1A1-205ENST00000476387 IFT122Q9HBG6 1241 aa18.02■□□□□ 0.48
COL1A1-205ENST00000476387 TUFT1Q9NNX1 390 aa18.02■□□□□ 0.48
COL1A1-205ENST00000476387 PER2O15055 1255 aa18.01■□□□□ 0.47
COL1A1-205ENST00000476387 ZBTB39O15060 712 aa18.01■□□□□ 0.47
COL1A1-205ENST00000476387 ASAP2O43150 1006 aa18.01■□□□□ 0.47
COL1A1-205ENST00000476387 RILPL1Q5EBL4 403 aa18.01■□□□□ 0.47
COL1A1-205ENST00000476387 PLPP4Q5VZY2 271 aa18.01■□□□□ 0.47
COL1A1-205ENST00000476387 LARP1BQ659C4 914 aaKnown RBP18.01■□□□□ 0.47
COL1A1-205ENST00000476387 TMEM184AQ6ZMB5 413 aa18.01■□□□□ 0.47
COL1A1-205ENST00000476387 SRGAP1Q7Z6B7 1085 aa18.01■□□□□ 0.47
COL1A1-205ENST00000476387 PRPF31Q8WWY3 499 aaKnown RBP18.01■□□□□ 0.47
COL1A1-205ENST00000476387 TMEM143Q96AN5 459 aa18.01■□□□□ 0.47
COL1A1-205ENST00000476387 RAB34Q9BZG1 259 aa18.01■□□□□ 0.47
COL1A1-205ENST00000476387 ENTPD7Q9NQZ7 604 aa18.01■□□□□ 0.47
COL1A1-205ENST00000476387 AGPAT5Q9NUQ2 364 aa18.01■□□□□ 0.47
COL1A1-205ENST00000476387 FAM105AQ9NUU6 356 aa18.01■□□□□ 0.47
COL1A1-205ENST00000476387 PCDHB6Q9Y5E3 794 aa18.01■□□□□ 0.47
COL1A1-205ENST00000476387 LAD1O00515 517 aa18■□□□□ 0.47
COL1A1-205ENST00000476387 DGAT1O75907 488 aa18■□□□□ 0.47
COL1A1-205ENST00000476387 PBX3P40426 434 aa18■□□□□ 0.47
COL1A1-205ENST00000476387 ALDH7A1P49419 539 aaKnown RBP18■□□□□ 0.47
COL1A1-205ENST00000476387 TOB1P50616 345 aaPredicted RBP18■□□□□ 0.47
COL1A1-205ENST00000476387 FXR2P51116 673 aaKnown RBP eCLIP18■□□□□ 0.47
COL1A1-205ENST00000476387 LAMTOR4Q0VGL1 99 aa18■□□□□ 0.47
COL1A1-205ENST00000476387 PTGDRQ13258 359 aa18■□□□□ 0.47
COL1A1-205ENST00000476387 KCNC3Q14003 757 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms