RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 SCRN1Q12765 414 aa14.71□□□□□ -0.05
MRPL55-228ENST00000476267 TCF15Q12870 199 aa14.71□□□□□ -0.05
MRPL55-228ENST00000476267 STK3Q13188 491 aa14.71□□□□□ -0.05
MRPL55-228ENST00000476267 TWF2Q6IBS0 349 aaKnown RBP14.71□□□□□ -0.05
MRPL55-228ENST00000476267 PPP4R3AQ6IN85 833 aa14.71□□□□□ -0.05
MRPL55-228ENST00000476267 DDX53Q86TM3 631 aaKnown RBP14.71□□□□□ -0.05
MRPL55-228ENST00000476267 HAS1Q92839 578 aa14.71□□□□□ -0.05
MRPL55-228ENST00000476267 IGSF21Q96ID5 467 aa14.71□□□□□ -0.05
MRPL55-228ENST00000476267 FAM20AQ96MK3 541 aa14.71□□□□□ -0.05
MRPL55-228ENST00000476267 PHOX2BQ99453 314 aa14.71□□□□□ -0.05
MRPL55-228ENST00000476267 INO80BQ9C086 356 aaPredicted RBP14.71□□□□□ -0.05
MRPL55-228ENST00000476267 ADAM7Q9H2U9 754 aa14.71□□□□□ -0.05
MRPL55-228ENST00000476267 POMKQ9H5K3 350 aa14.71□□□□□ -0.05
MRPL55-228ENST00000476267 AGPAT5Q9NUQ2 364 aa14.71□□□□□ -0.05
MRPL55-228ENST00000476267 DMDP11532 3685 aa14.7□□□□□ -0.06
MRPL55-228ENST00000476267 ZC3H11AO75152 810 aaKnown RBP eCLIP14.7□□□□□ -0.06
MRPL55-228ENST00000476267 GALTP07902 379 aa14.7□□□□□ -0.06
MRPL55-228ENST00000476267 CTSAP10619 480 aa14.7□□□□□ -0.06
MRPL55-228ENST00000476267 SKIP12755 728 aa14.7□□□□□ -0.06
MRPL55-228ENST00000476267 QARSP47897 775 aaKnown RBP14.7□□□□□ -0.06
MRPL55-228ENST00000476267 RAB27AP51159 221 aa14.7□□□□□ -0.06
MRPL55-228ENST00000476267 POLGP54098 1239 aaPredicted RBP14.7□□□□□ -0.06
MRPL55-228ENST00000476267 NPEPPSP55786 919 aa14.7□□□□□ -0.06
MRPL55-228ENST00000476267 LETM2Q2VYF4 491 aa14.7□□□□□ -0.06
MRPL55-228ENST00000476267 UBXN11Q5T124 520 aa14.7□□□□□ -0.06
MRPL55-228ENST00000476267 AGMOQ6ZNB7 445 aa14.7□□□□□ -0.06
MRPL55-228ENST00000476267 VPS52Q8N1B4 723 aa14.7□□□□□ -0.06
MRPL55-228ENST00000476267 FEZF2Q8TBJ5 459 aa14.7□□□□□ -0.06
MRPL55-228ENST00000476267 OXER1Q8TDS5 423 aa14.7□□□□□ -0.06
MRPL55-228ENST00000476267 SLC22A17Q8WUG5 538 aa14.7□□□□□ -0.06
MRPL55-228ENST00000476267 AUTS2Q8WXX7 1259 aa14.7□□□□□ -0.06
MRPL55-228ENST00000476267 TMEM169Q96HH4 297 aa14.7□□□□□ -0.06
MRPL55-228ENST00000476267 NLRP4Q96MN2 994 aa14.7□□□□□ -0.06
MRPL55-228ENST00000476267 NECTIN4Q96NY8 510 aa14.7□□□□□ -0.06
MRPL55-228ENST00000476267 MINDY3Q9H8M7 445 aa14.7□□□□□ -0.06
MRPL55-228ENST00000476267 DNAJB4Q9UDY4 337 aa14.7□□□□□ -0.06
MRPL55-228ENST00000476267 PPME1Q9Y570 386 aa14.7□□□□□ -0.06
MRPL55-228ENST00000476267 COL4A3BPQ9Y5P4 624 aa14.7□□□□□ -0.06
MRPL55-228ENST00000476267 C2CD4DB7Z1M9 353 aa14.69□□□□□ -0.06
MRPL55-228ENST00000476267 TBX3O15119 743 aa14.69□□□□□ -0.06
MRPL55-228ENST00000476267 CXCL14O95715 111 aa14.69□□□□□ -0.06
MRPL55-228ENST00000476267 P4HBP07237 508 aaKnown RBP14.69□□□□□ -0.06
MRPL55-228ENST00000476267 HOXA11P31270 313 aaPredicted RBP14.69□□□□□ -0.06
MRPL55-228ENST00000476267 AFF1P51825 1210 aaKnown RBP14.69□□□□□ -0.06
MRPL55-228ENST00000476267 VCPP55072 806 aaKnown RBP14.69□□□□□ -0.06
MRPL55-228ENST00000476267 LONRF3Q496Y0 759 aa14.69□□□□□ -0.06
MRPL55-228ENST00000476267 TPRNQ4KMQ1 711 aa14.69□□□□□ -0.06
MRPL55-228ENST00000476267 NOMO2Q5JPE7 1267 aa14.69□□□□□ -0.06
MRPL55-228ENST00000476267 EARS2Q5JPH6 523 aaKnown RBP14.69□□□□□ -0.06
MRPL55-228ENST00000476267 GLB1LQ6UWU2 654 aa14.69□□□□□ -0.06
MRPL55-228ENST00000476267 CATSPER4Q7RTX7 472 aa14.69□□□□□ -0.06
MRPL55-228ENST00000476267 MRPL10Q7Z7H8 261 aaKnown RBP14.69□□□□□ -0.06
MRPL55-228ENST00000476267 NEK8Q86SG6 692 aa14.69□□□□□ -0.06
MRPL55-228ENST00000476267 ZNF280BQ86YH2 543 aa14.69□□□□□ -0.06
MRPL55-228ENST00000476267 JPH2Q9BR39 696 aaPredicted RBP14.69□□□□□ -0.06
MRPL55-228ENST00000476267 GJB4Q9NTQ9 266 aa14.69□□□□□ -0.06
MRPL55-228ENST00000476267 PDRG1Q9NUG6 133 aa14.69□□□□□ -0.06
MRPL55-228ENST00000476267 C2orf16Q68DN1 1984 aa14.68□□□□□ -0.06
MRPL55-228ENST00000476267 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.68□□□□□ -0.06
MRPL55-228ENST00000476267 CARNS1A5YM72 827 aa14.68□□□□□ -0.06
MRPL55-228ENST00000476267 DDHD2O94830 711 aa14.68□□□□□ -0.06
MRPL55-228ENST00000476267 CTDNEP1O95476 244 aa14.68□□□□□ -0.06
MRPL55-228ENST00000476267 GCFC2P16383 781 aaKnown RBP14.68□□□□□ -0.06
MRPL55-228ENST00000476267 EPCAMP16422 314 aa14.68□□□□□ -0.06
MRPL55-228ENST00000476267 SP100P23497 879 aaPredicted RBP14.68□□□□□ -0.06
MRPL55-228ENST00000476267 SLC11A1P49279 550 aa14.68□□□□□ -0.06
MRPL55-228ENST00000476267 GIT2Q14161 759 aa14.68□□□□□ -0.06
MRPL55-228ENST00000476267 PTPN14Q15678 1187 aa14.68□□□□□ -0.06
MRPL55-228ENST00000476267 KIAA1841Q6NSI8 718 aa14.68□□□□□ -0.06
MRPL55-228ENST00000476267 CPLX2Q6PUV4 134 aaKnown RBP14.68□□□□□ -0.06
MRPL55-228ENST00000476267 POTEDQ86YR6 584 aa14.68□□□□□ -0.06
MRPL55-228ENST00000476267 SUGP1Q8IWZ8 645 aaKnown RBP14.68□□□□□ -0.06
MRPL55-228ENST00000476267 C4orf19Q8IY42 314 aa14.68□□□□□ -0.06
MRPL55-228ENST00000476267 PRPF31Q8WWY3 499 aaKnown RBP14.68□□□□□ -0.06
MRPL55-228ENST00000476267 SLC7A3Q8WY07 619 aa14.68□□□□□ -0.06
MRPL55-228ENST00000476267 TNFRSF25Q93038 417 aa14.68□□□□□ -0.06
MRPL55-228ENST00000476267 PRRX2Q99811 253 aa14.68□□□□□ -0.06
MRPL55-228ENST00000476267 LXNQ9BS40 222 aa14.68□□□□□ -0.06
MRPL55-228ENST00000476267 DZANK1Q9NVP4 752 aa14.68□□□□□ -0.06
MRPL55-228ENST00000476267 TPCN1Q9ULQ1 816 aa14.68□□□□□ -0.06
MRPL55-228ENST00000476267 NR2E1Q9Y466 385 aa14.68□□□□□ -0.06
MRPL55-228ENST00000476267 PCDHB2Q9Y5E7 798 aa14.68□□□□□ -0.06
MRPL55-228ENST00000476267 CCDC194A0A1B0GVG4 234 aa14.67□□□□□ -0.06
MRPL55-228ENST00000476267 FAM205CA6NFA0 338 aa14.67□□□□□ -0.06
MRPL55-228ENST00000476267 PFKFB2O60825 505 aa14.67□□□□□ -0.06
MRPL55-228ENST00000476267 DKC1O60832 514 aaKnown RBP eCLIP14.67□□□□□ -0.06
MRPL55-228ENST00000476267 DTNBO60941 627 aa14.67□□□□□ -0.06
MRPL55-228ENST00000476267 LILRB3O75022 631 aa14.67□□□□□ -0.06
MRPL55-228ENST00000476267 EFEMP2O95967 443 aa14.67□□□□□ -0.06
MRPL55-228ENST00000476267 PDGFBP01127 241 aaPredicted RBP14.67□□□□□ -0.06
MRPL55-228ENST00000476267 WEE2P0C1S8 567 aa14.67□□□□□ -0.06
MRPL55-228ENST00000476267 RFC5P40937 340 aa14.67□□□□□ -0.06
MRPL55-228ENST00000476267 MTHFRP42898 656 aa14.67□□□□□ -0.06
MRPL55-228ENST00000476267 PTPN5P54829 565 aa14.67□□□□□ -0.06
MRPL55-228ENST00000476267 EPHA7Q15375 998 aa14.67□□□□□ -0.06
MRPL55-228ENST00000476267 CES5AQ6NT32 575 aa14.67□□□□□ -0.06
MRPL55-228ENST00000476267 KANK3Q6NY19 840 aa14.67□□□□□ -0.06
MRPL55-228ENST00000476267 PIK3AP1Q6ZUJ8 805 aa14.67□□□□□ -0.06
MRPL55-228ENST00000476267 SRGAP1Q7Z6B7 1085 aa14.67□□□□□ -0.06
MRPL55-228ENST00000476267 C12orf76Q8N812 135 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms