RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 GNEQ9Y223 722 aaKnown RBP13.43□□□□□ -0.26
MRPL55-227ENST00000475832 A0A1B0GTH6 734 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 DENND3A2RUS2 1198 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 RRN3P2A6NIE6 340 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 LRRC10BA6NIK2 292 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 SLC16A3O15427 465 aaKnown RBP13.42□□□□□ -0.26
MRPL55-227ENST00000475832 NR3C1P04150 777 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 RARBP10826 455 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 EPB41P11171 864 aaKnown RBP13.42□□□□□ -0.26
MRPL55-227ENST00000475832 CYBAP13498 195 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 NR2F2P24468 414 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 CCND3P30281 292 aaPredicted RBP13.42□□□□□ -0.26
MRPL55-227ENST00000475832 EFNA5P52803 228 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 GTF2BQ00403 316 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 PPP2R3AQ06190 1150 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 NFIL3Q16649 462 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 ZC2HC1CQ53FD0 456 aaPredicted RBP13.42□□□□□ -0.26
MRPL55-227ENST00000475832 TMEM63BQ5T3F8 832 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 LHX8Q68G74 356 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 TMC6Q7Z403 805 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 ZBTB8OSQ8IWT0 167 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 TMEM143Q96AN5 459 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 FIZ1Q96SL8 496 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 TUBGCP2Q9BSJ2 902 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 NOC4LQ9BVI4 516 aaKnown RBP13.42□□□□□ -0.26
MRPL55-227ENST00000475832 C2orf40Q9H1Z8 148 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 SUGCTQ9HAC7 445 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 XPNPEP1Q9NQW7 623 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 FRMD4BQ9Y2L6 1034 aa13.42□□□□□ -0.26
MRPL55-227ENST00000475832 DNAH12Q6ZR08 3092 aa13.41□□□□□ -0.26
MRPL55-227ENST00000475832 LRRIQ4A6NIV6 560 aa13.41□□□□□ -0.26
MRPL55-227ENST00000475832 SEPT4O43236 478 aa13.41□□□□□ -0.26
MRPL55-227ENST00000475832 PPP1R37O75864 691 aa13.41□□□□□ -0.26
MRPL55-227ENST00000475832 MYL3P08590 195 aa13.41□□□□□ -0.26
MRPL55-227ENST00000475832 ZNF286BP0CG31 522 aa13.41□□□□□ -0.26
MRPL55-227ENST00000475832 INSRRP14616 1297 aa13.41□□□□□ -0.26
MRPL55-227ENST00000475832 ARL2P36404 184 aa13.41□□□□□ -0.26
MRPL55-227ENST00000475832 IGBP1P78318 339 aa13.41□□□□□ -0.26
MRPL55-227ENST00000475832 PPFIA1Q13136 1202 aa13.41□□□□□ -0.26
MRPL55-227ENST00000475832 FSCN1Q16658 493 aaKnown RBP13.41□□□□□ -0.26
MRPL55-227ENST00000475832 MAN2A1Q16706 1144 aa13.41□□□□□ -0.26
MRPL55-227ENST00000475832 SPECC1LQ69YQ0 1117 aa13.41□□□□□ -0.26
MRPL55-227ENST00000475832 METTL13Q8N6R0 699 aa13.41□□□□□ -0.26
MRPL55-227ENST00000475832 TMEM161BQ8NDZ6 487 aa13.41□□□□□ -0.26
MRPL55-227ENST00000475832 TRPV1Q8NER1 839 aa13.41□□□□□ -0.26
MRPL55-227ENST00000475832 BICD1Q96G01 975 aa13.41□□□□□ -0.26
MRPL55-227ENST00000475832 C16orf70Q9BSU1 422 aa13.41□□□□□ -0.26
MRPL55-227ENST00000475832 STRA6Q9BX79 667 aa13.41□□□□□ -0.26
MRPL55-227ENST00000475832 VPS16Q9H269 839 aa13.41□□□□□ -0.26
MRPL55-227ENST00000475832 RTN4Q9NQC3 1192 aaKnown RBP13.41□□□□□ -0.26
MRPL55-227ENST00000475832 TAB2Q9NYJ8 693 aa13.41□□□□□ -0.26
MRPL55-227ENST00000475832 SUCLA2Q9P2R7 463 aaPredicted RBP13.41□□□□□ -0.26
MRPL55-227ENST00000475832 OGDHLQ9ULD0 1010 aa13.41□□□□□ -0.26
MRPL55-227ENST00000475832 TBX20Q9UMR3 447 aa13.41□□□□□ -0.26
MRPL55-227ENST00000475832 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.41□□□□□ -0.26
MRPL55-227ENST00000475832 LGALS16A8MUM7 142 aa13.4□□□□□ -0.26
MRPL55-227ENST00000475832 K7ERI5 159 aa13.4□□□□□ -0.26
MRPL55-227ENST00000475832 GNAT1P11488 350 aa13.4□□□□□ -0.26
MRPL55-227ENST00000475832 COL9A1P20849 921 aa13.4□□□□□ -0.26
MRPL55-227ENST00000475832 PSMC2P35998 433 aaKnown RBP13.4□□□□□ -0.26
MRPL55-227ENST00000475832 CDC42EP1Q00587 391 aa13.4□□□□□ -0.26
MRPL55-227ENST00000475832 UBXN1Q04323 297 aa13.4□□□□□ -0.26
MRPL55-227ENST00000475832 TRIM14Q14142 442 aa13.4□□□□□ -0.26
MRPL55-227ENST00000475832 NR1I3Q14994 352 aa13.4□□□□□ -0.26
MRPL55-227ENST00000475832 CEP135Q66GS9 1140 aa13.4□□□□□ -0.26
MRPL55-227ENST00000475832 EFCAB12Q6NXP0 572 aa13.4□□□□□ -0.26
MRPL55-227ENST00000475832 LRRC55Q6ZSA7 311 aa13.4□□□□□ -0.26
MRPL55-227ENST00000475832 FRMD5Q7Z6J6 570 aa13.4□□□□□ -0.26
MRPL55-227ENST00000475832 PPFIBP1Q86W92 1011 aa13.4□□□□□ -0.26
MRPL55-227ENST00000475832 IRF2BP1Q8IU81 584 aa13.4□□□□□ -0.26
MRPL55-227ENST00000475832 MAP4K3Q8IVH8 894 aa13.4□□□□□ -0.26
MRPL55-227ENST00000475832 VSTM4Q8IW00 320 aa13.4□□□□□ -0.26
MRPL55-227ENST00000475832 ZC3H3Q8IXZ2 948 aaKnown RBP13.4□□□□□ -0.26
MRPL55-227ENST00000475832 ANKLE1Q8NAG6 615 aa13.4□□□□□ -0.26
MRPL55-227ENST00000475832 PRPF31Q8WWY3 499 aaKnown RBP13.4□□□□□ -0.26
MRPL55-227ENST00000475832 NAP1L5Q96NT1 182 aaPredicted RBP13.4□□□□□ -0.26
MRPL55-227ENST00000475832 CEP89Q96ST8 783 aa13.4□□□□□ -0.26
MRPL55-227ENST00000475832 MAP7D2Q96T17 732 aa13.4□□□□□ -0.26
MRPL55-227ENST00000475832 MKNK1Q9BUB5 465 aa13.4□□□□□ -0.26
MRPL55-227ENST00000475832 RNPEPQ9H4A4 650 aa13.4□□□□□ -0.26
MRPL55-227ENST00000475832 AGPAT3Q9NRZ7 376 aa13.4□□□□□ -0.26
MRPL55-227ENST00000475832 ARMCX3Q9UH62 379 aaPredicted RBP13.4□□□□□ -0.26
MRPL55-227ENST00000475832 NRCAMQ92823 1304 aa13.39□□□□□ -0.27
MRPL55-227ENST00000475832 IGKV6-21A0A0C4DH24 114 aa13.39□□□□□ -0.27
MRPL55-227ENST00000475832 EXOC3O60645 756 aa13.39□□□□□ -0.27
MRPL55-227ENST00000475832 MSCO60682 206 aa13.39□□□□□ -0.27
MRPL55-227ENST00000475832 F2P00734 622 aa13.39□□□□□ -0.27
MRPL55-227ENST00000475832 TFRCP02786 760 aaKnown RBP13.39□□□□□ -0.27
MRPL55-227ENST00000475832 C6orf222P0C671 652 aaPredicted RBP13.39□□□□□ -0.27
MRPL55-227ENST00000475832 KRT13P13646 458 aa13.39□□□□□ -0.27
MRPL55-227ENST00000475832 GLRA2P23416 452 aa13.39□□□□□ -0.27
MRPL55-227ENST00000475832 KLRC1P26715 233 aa13.39□□□□□ -0.27
MRPL55-227ENST00000475832 MARSP56192 900 aaKnown RBP13.39□□□□□ -0.27
MRPL55-227ENST00000475832 GJA9P57773 515 aa13.39□□□□□ -0.27
MRPL55-227ENST00000475832 CHMP4BP1P59074 171 aa13.39□□□□□ -0.27
MRPL55-227ENST00000475832 MFSD10Q14728 455 aa13.39□□□□□ -0.27
MRPL55-227ENST00000475832 VWA3BQ502W6 1294 aa13.39□□□□□ -0.27
MRPL55-227ENST00000475832 ARMCX5Q6P1M9 558 aa13.39□□□□□ -0.27
MRPL55-227ENST00000475832 USP37Q86T82 979 aa13.39□□□□□ -0.27
MRPL55-227ENST00000475832 SLC9A9Q8IVB4 645 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms