RNA–Protein interactions for RNA: ENST00000474843.1

SRRM1-210, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-210ENST00000474843 PNPLA6Q8IY17 1366 aa6.81□□□□□ -1.32
SRRM1-210ENST00000474843 USP54Q70EL1 1684 aa6.81□□□□□ -1.32
SRRM1-210ENST00000474843 PRAMEF22A3QJZ6 481 aa6.8□□□□□ -1.32
SRRM1-210ENST00000474843 PTX3P26022 381 aaPredicted RBP6.8□□□□□ -1.32
SRRM1-210ENST00000474843 SOX5P35711 763 aa6.8□□□□□ -1.32
SRRM1-210ENST00000474843 HERVK_113P62684 666 aa6.8□□□□□ -1.32
SRRM1-210ENST00000474843 RALBP1Q15311 655 aa6.8□□□□□ -1.32
SRRM1-210ENST00000474843 PRAMEF18Q5VWM3 479 aa6.8□□□□□ -1.32
SRRM1-210ENST00000474843 CC2D1AQ6P1N0 951 aaPredicted RBP6.8□□□□□ -1.32
SRRM1-210ENST00000474843 NRKQ7Z2Y5 1582 aa6.8□□□□□ -1.32
SRRM1-210ENST00000474843 STRA8Q7Z7C7 330 aa6.8□□□□□ -1.32
SRRM1-210ENST00000474843 NME9Q86XW9 330 aa6.8□□□□□ -1.32
SRRM1-210ENST00000474843 KIF18BQ86Y91 864 aa6.8□□□□□ -1.32
SRRM1-210ENST00000474843 TMEM151BQ8IW70 566 aa6.8□□□□□ -1.32
SRRM1-210ENST00000474843 STPG3Q8N7X2 389 aa6.8□□□□□ -1.32
SRRM1-210ENST00000474843 TP53I13Q8NBR0 393 aaPredicted RBP6.8□□□□□ -1.32
SRRM1-210ENST00000474843 SMC1BQ8NDV3 1235 aa6.8□□□□□ -1.32
SRRM1-210ENST00000474843 ELF4Q99607 663 aaPredicted RBP6.8□□□□□ -1.32
SRRM1-210ENST00000474843 FAM126AQ9BYI3 521 aaPredicted RBP6.8□□□□□ -1.32
SRRM1-210ENST00000474843 PRKAB1Q9Y478 270 aa6.8□□□□□ -1.32
SRRM1-210ENST00000474843 FBXO21O94952 628 aa6.79□□□□□ -1.32
SRRM1-210ENST00000474843 IL18BPO95998 194 aa6.79□□□□□ -1.32
SRRM1-210ENST00000474843 SDHAP31040 664 aa6.79□□□□□ -1.32
SRRM1-210ENST00000474843 ADCYAP1R1P41586 468 aa6.79□□□□□ -1.32
SRRM1-210ENST00000474843 ID4P47928 161 aa6.79□□□□□ -1.32
SRRM1-210ENST00000474843 KPNA1P52294 538 aaPredicted RBP6.79□□□□□ -1.32
SRRM1-210ENST00000474843 MLLT6P55198 1093 aaPredicted RBP6.79□□□□□ -1.32
SRRM1-210ENST00000474843 MEX3CQ5U5Q3 659 aaKnown RBP6.79□□□□□ -1.32
SRRM1-210ENST00000474843 LRSAM1Q6UWE0 723 aa6.79□□□□□ -1.32
SRRM1-210ENST00000474843 TTLL7Q6ZT98 887 aa6.79□□□□□ -1.32
SRRM1-210ENST00000474843 FAM177A1Q8N128 213 aaPredicted RBP6.79□□□□□ -1.32
SRRM1-210ENST00000474843 IGDCC4Q8TDY8 1250 aa6.79□□□□□ -1.32
SRRM1-210ENST00000474843 ZCCHC14Q8WYQ9 949 aaKnown RBP6.79□□□□□ -1.32
SRRM1-210ENST00000474843 USP7Q93009 1102 aa6.79□□□□□ -1.32
SRRM1-210ENST00000474843 SPATA25Q9BR10 227 aa6.79□□□□□ -1.32
SRRM1-210ENST00000474843 INCENPQ9NQS7 918 aa6.79□□□□□ -1.32
SRRM1-210ENST00000474843 TOMM22Q9NS69 142 aa6.79□□□□□ -1.32
SRRM1-210ENST00000474843 SPTLC3Q9NUV7 552 aa6.79□□□□□ -1.32
SRRM1-210ENST00000474843 NTMQ9P121 344 aa6.79□□□□□ -1.32
SRRM1-210ENST00000474843 PIK3C2AO00443 1686 aa6.79□□□□□ -1.32
SRRM1-210ENST00000474843 USP19O94966 1318 aa6.78□□□□□ -1.32
SRRM1-210ENST00000474843 DDX3XO00571 662 aaKnown RBP eCLIP6.78□□□□□ -1.32
SRRM1-210ENST00000474843 ANP32CO43423 234 aa6.78□□□□□ -1.32
SRRM1-210ENST00000474843 MPIG6BO95866 241 aa6.78□□□□□ -1.32
SRRM1-210ENST00000474843 ZSCAN22P10073 491 aaPredicted RBP6.78□□□□□ -1.32
SRRM1-210ENST00000474843 EVA1CP58658 441 aa6.78□□□□□ -1.32
SRRM1-210ENST00000474843 PRR31Q5SQ13 230 aa6.78□□□□□ -1.32
SRRM1-210ENST00000474843 CC2D1BQ5T0F9 858 aaKnown RBP6.78□□□□□ -1.32
SRRM1-210ENST00000474843 RNF187Q5TA31 235 aaPredicted RBP6.78□□□□□ -1.32
SRRM1-210ENST00000474843 ESRP1Q6NXG1 681 aaKnown RBP6.78□□□□□ -1.32
SRRM1-210ENST00000474843 TRMT10BQ6PF06 316 aaKnown RBP6.78□□□□□ -1.32
SRRM1-210ENST00000474843 LCNL1Q6ZST4 164 aa6.78□□□□□ -1.32
SRRM1-210ENST00000474843 DDX46Q7L014 1031 aaKnown RBP6.78□□□□□ -1.32
SRRM1-210ENST00000474843 ARHGEF25Q86VW2 580 aa6.78□□□□□ -1.32
SRRM1-210ENST00000474843 CARFQ8N187 725 aa6.78□□□□□ -1.32
SRRM1-210ENST00000474843 LINC01356Q8N9X3 169 aa6.78□□□□□ -1.32
SRRM1-210ENST00000474843 WRNIP1Q96S55 665 aa6.78□□□□□ -1.32
SRRM1-210ENST00000474843 SPC25Q9HBM1 224 aa6.78□□□□□ -1.32
SRRM1-210ENST00000474843 KIF24Q5T7B8 1368 aa6.78□□□□□ -1.32
SRRM1-210ENST00000474843 AATKQ6ZMQ8 1374 aa6.78□□□□□ -1.32
SRRM1-210ENST00000474843 CRYBG1Q9Y4K1 1723 aa6.78□□□□□ -1.32
SRRM1-210ENST00000474843 LTN1O94822 1766 aa6.77□□□□□ -1.33
SRRM1-210ENST00000474843 PHRF1Q9P1Y6 1649 aaKnown RBP6.77□□□□□ -1.33
SRRM1-210ENST00000474843 DNAJC6O75061 913 aa6.77□□□□□ -1.33
SRRM1-210ENST00000474843 FKBP9O95302 570 aa6.77□□□□□ -1.33
SRRM1-210ENST00000474843 ZNF28P17035 718 aa6.77□□□□□ -1.33
SRRM1-210ENST00000474843 RPL13P26373 211 aaKnown RBP6.77□□□□□ -1.33
SRRM1-210ENST00000474843 AMPHP49418 695 aa6.77□□□□□ -1.33
SRRM1-210ENST00000474843 SARSP49591 514 aaKnown RBP6.77□□□□□ -1.33
SRRM1-210ENST00000474843 FKBP9P1Q75LS8 142 aa6.77□□□□□ -1.33
SRRM1-210ENST00000474843 IP6K1Q92551 441 aa6.77□□□□□ -1.33
SRRM1-210ENST00000474843 AMNQ9BXJ7 453 aa6.77□□□□□ -1.33
SRRM1-210ENST00000474843 MS4A5Q9H3V2 200 aa6.77□□□□□ -1.33
SRRM1-210ENST00000474843 PRDM11Q9NQV5 511 aa6.77□□□□□ -1.33
SRRM1-210ENST00000474843 ACSS2Q9NR19 701 aa6.77□□□□□ -1.33
SRRM1-210ENST00000474843 KCND1Q9NSA2 647 aa6.77□□□□□ -1.33
SRRM1-210ENST00000474843 ASB1Q9Y576 335 aa6.77□□□□□ -1.33
SRRM1-210ENST00000474843 SPO11Q9Y5K1 396 aa6.77□□□□□ -1.33
SRRM1-210ENST00000474843 CPDO75976 1380 aa6.77□□□□□ -1.33
SRRM1-210ENST00000474843 MED1Q15648 1581 aaPredicted RBP6.77□□□□□ -1.33
SRRM1-210ENST00000474843 COL14A1Q05707 1796 aaKnown RBP6.77□□□□□ -1.33
SRRM1-210ENST00000474843 RGPD5Q99666 1765 aa6.77□□□□□ -1.33
SRRM1-210ENST00000474843 OVOS2A0A0J9YW53 1432 aa6.76□□□□□ -1.33
SRRM1-210ENST00000474843 OVOS2Q6IE36 1432 aa6.76□□□□□ -1.33
SRRM1-210ENST00000474843 SLIT3O75094 1523 aa6.76□□□□□ -1.33
SRRM1-210ENST00000474843 NWD2Q9ULI1 1742 aa6.76□□□□□ -1.33
SRRM1-210ENST00000474843 SH3D21A4FU49 640 aa6.76□□□□□ -1.33
SRRM1-210ENST00000474843 TGM5O43548 720 aa6.76□□□□□ -1.33
SRRM1-210ENST00000474843 TRIM13O60858 407 aa6.76□□□□□ -1.33
SRRM1-210ENST00000474843 VIL1P09327 827 aaKnown RBP6.76□□□□□ -1.33
SRRM1-210ENST00000474843 LSSP48449 732 aa6.76□□□□□ -1.33
SRRM1-210ENST00000474843 FNTBP49356 437 aa6.76□□□□□ -1.33
SRRM1-210ENST00000474843 IL13RA1P78552 427 aa6.76□□□□□ -1.33
SRRM1-210ENST00000474843 SMAD2Q15796 467 aaKnown RBP6.76□□□□□ -1.33
SRRM1-210ENST00000474843 FBLN7Q53RD9 439 aa6.76□□□□□ -1.33
SRRM1-210ENST00000474843 ZNF772Q68DY9 489 aaPredicted RBP6.76□□□□□ -1.33
SRRM1-210ENST00000474843 MCTP2Q6DN12 878 aa6.76□□□□□ -1.33
SRRM1-210ENST00000474843 KRT26Q7Z3Y9 468 aa6.76□□□□□ -1.33
SRRM1-210ENST00000474843 RTN4RL1Q86UN2 441 aaPredicted RBP6.76□□□□□ -1.33
SRRM1-210ENST00000474843 AFAP1L2Q8N4X5 818 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms