RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 GFPT1Q06210 699 aaPredicted RBP23.69■■□□□ 1.38
CCM2-206ENST00000474617 METTL7BQ6UX53 244 aa23.69■■□□□ 1.38
CCM2-206ENST00000474617 TMC2Q8TDI7 906 aa23.69■■□□□ 1.38
CCM2-206ENST00000474617 OPTNQ96CV9 577 aa23.69■■□□□ 1.38
CCM2-206ENST00000474617 INTS2Q9H0H0 1204 aaKnown RBP23.69■■□□□ 1.38
CCM2-206ENST00000474617 TRIM10Q9UDY6 481 aa23.69■■□□□ 1.38
CCM2-206ENST00000474617 DENND3A2RUS2 1198 aa23.68■■□□□ 1.38
CCM2-206ENST00000474617 GRIN3BO60391 1043 aa23.68■■□□□ 1.38
CCM2-206ENST00000474617 CNMDO75829 334 aa23.68■■□□□ 1.38
CCM2-206ENST00000474617 ACTN1P12814 892 aa23.68■■□□□ 1.38
CCM2-206ENST00000474617 SOX5P35711 763 aa23.68■■□□□ 1.38
CCM2-206ENST00000474617 ITIH3Q06033 890 aa23.68■■□□□ 1.38
CCM2-206ENST00000474617 KCTD2Q14681 263 aa23.68■■□□□ 1.38
CCM2-206ENST00000474617 NAB2Q15742 525 aa23.68■■□□□ 1.38
CCM2-206ENST00000474617 KSR1Q8IVT5 923 aa23.68■■□□□ 1.38
CCM2-206ENST00000474617 UBE2Q2Q8WVN8 375 aa23.68■■□□□ 1.38
CCM2-206ENST00000474617 CNKSR2Q8WXI2 1034 aa23.68■■□□□ 1.38
CCM2-206ENST00000474617 FBXL18Q96ME1 805 aa23.68■■□□□ 1.38
CCM2-206ENST00000474617 ARHGAP28Q9P2N2 729 aa23.68■■□□□ 1.38
CCM2-206ENST00000474617 RNF14Q9UBS8 474 aa23.68■■□□□ 1.38
CCM2-206ENST00000474617 MACROD2A1Z1Q3 448 aa23.67■■□□□ 1.38
CCM2-206ENST00000474617 SOWAHBA6NEL2 793 aa23.67■■□□□ 1.38
CCM2-206ENST00000474617 UBA1P22314 1058 aaKnown RBP23.67■■□□□ 1.38
CCM2-206ENST00000474617 MCM3P25205 808 aa23.67■■□□□ 1.38
CCM2-206ENST00000474617 CNGA1P29973 690 aa23.67■■□□□ 1.38
CCM2-206ENST00000474617 POLGP54098 1239 aaPredicted RBP23.67■■□□□ 1.38
CCM2-206ENST00000474617 FKBP1BP68106 108 aa23.67■■□□□ 1.38
CCM2-206ENST00000474617 NAA30Q147X3 362 aaPredicted RBP23.67■■□□□ 1.38
CCM2-206ENST00000474617 CYFIP1Q7L576 1253 aa23.67■■□□□ 1.38
CCM2-206ENST00000474617 MORC4Q8TE76 937 aa23.67■■□□□ 1.38
CCM2-206ENST00000474617 SLC7A3Q8WY07 619 aa23.67■■□□□ 1.38
CCM2-206ENST00000474617 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.67■■□□□ 1.38
CCM2-206ENST00000474617 TAF1DQ9H5J8 278 aaPredicted RBP23.67■■□□□ 1.38
CCM2-206ENST00000474617 DHX33Q9H6R0 707 aaKnown RBP23.67■■□□□ 1.38
CCM2-206ENST00000474617 GPRC5CQ9NQ84 441 aa23.67■■□□□ 1.38
CCM2-206ENST00000474617 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.67■■□□□ 1.38
CCM2-206ENST00000474617 V9GYY5 206 aaPredicted RBP23.67■■□□□ 1.38
CCM2-206ENST00000474617 MYH9P35579 1960 aaKnown RBP23.67■■□□□ 1.38
CCM2-206ENST00000474617 F8VZ95 297 aa23.66■■□□□ 1.38
CCM2-206ENST00000474617 FARP2O94887 1054 aaPredicted RBP23.66■■□□□ 1.38
CCM2-206ENST00000474617 NAMPTP43490 491 aa23.66■■□□□ 1.38
CCM2-206ENST00000474617 PTK2Q05397 1052 aa23.66■■□□□ 1.38
CCM2-206ENST00000474617 MOGSQ13724 837 aa23.66■■□□□ 1.38
CCM2-206ENST00000474617 SMYD5Q6GMV2 418 aa23.66■■□□□ 1.38
CCM2-206ENST00000474617 FBXO38Q6PIJ6 1188 aa23.66■■□□□ 1.38
CCM2-206ENST00000474617 SEPT1Q8WYJ6 367 aa23.66■■□□□ 1.38
CCM2-206ENST00000474617 CLMNQ96JQ2 1002 aa23.66■■□□□ 1.38
CCM2-206ENST00000474617 DNAJC25-GNG10A0A024R161 153 aa23.65■■□□□ 1.38
CCM2-206ENST00000474617 A0A0A6YYK5 440 aaPredicted RBP23.65■■□□□ 1.38
CCM2-206ENST00000474617 SLC26A2P50443 739 aa23.65■■□□□ 1.38
CCM2-206ENST00000474617 CCNA1P78396 465 aa23.65■■□□□ 1.38
CCM2-206ENST00000474617 SP2Q02086 613 aa23.65■■□□□ 1.38
CCM2-206ENST00000474617 EMC2Q15006 297 aa23.65■■□□□ 1.38
CCM2-206ENST00000474617 BRD3Q15059 726 aa23.65■■□□□ 1.38
CCM2-206ENST00000474617 TEX35Q5T0J7 233 aa23.65■■□□□ 1.38
CCM2-206ENST00000474617 SEPT14Q6ZU15 432 aa23.65■■□□□ 1.38
CCM2-206ENST00000474617 JPH2Q9BR39 696 aaPredicted RBP23.65■■□□□ 1.38
CCM2-206ENST00000474617 CBWD1Q9BRT8 395 aa23.65■■□□□ 1.38
CCM2-206ENST00000474617 PAGR1Q9BTK6 254 aa23.65■■□□□ 1.38
CCM2-206ENST00000474617 PORCNQ9H237 461 aa23.65■■□□□ 1.38
CCM2-206ENST00000474617 DNAJC12Q9UKB3 198 aa23.65■■□□□ 1.38
CCM2-206ENST00000474617 SNX12Q9UMY4 172 aa23.65■■□□□ 1.38
CCM2-206ENST00000474617 PIGRP01833 764 aa23.64■■□□□ 1.38
CCM2-206ENST00000474617 SNRNP35Q16560 246 aaKnown RBP23.64■■□□□ 1.38
CCM2-206ENST00000474617 CBWD6Q4V339 395 aa23.64■■□□□ 1.38
CCM2-206ENST00000474617 CBWD3Q5JTY5 395 aa23.64■■□□□ 1.38
CCM2-206ENST00000474617 CBWD5Q5RIA9 395 aa23.64■■□□□ 1.38
CCM2-206ENST00000474617 SLFN12LQ6IEE8 588 aa23.64■■□□□ 1.38
CCM2-206ENST00000474617 ZNF572Q7Z3I7 529 aaPredicted RBP23.64■■□□□ 1.38
CCM2-206ENST00000474617 MSANTD4Q8NCY6 345 aa23.64■■□□□ 1.38
CCM2-206ENST00000474617 LRRN4CLQ8ND94 238 aa23.64■■□□□ 1.38
CCM2-206ENST00000474617 MMP19Q99542 508 aa23.64■■□□□ 1.38
CCM2-206ENST00000474617 POLR3FQ9H1D9 316 aaPredicted RBP23.64■■□□□ 1.38
CCM2-206ENST00000474617 XPNPEP1Q9NQW7 623 aa23.64■■□□□ 1.38
CCM2-206ENST00000474617 RBPJLQ9UBG7 517 aa23.64■■□□□ 1.38
CCM2-206ENST00000474617 ADAMTS1Q9UHI8 967 aa23.64■■□□□ 1.38
CCM2-206ENST00000474617 HYOU1Q9Y4L1 999 aa23.64■■□□□ 1.38
CCM2-206ENST00000474617 PCDHGC5Q9Y5F6 944 aa23.64■■□□□ 1.38
CCM2-206ENST00000474617 LRRC37A2A6NM11 1700 aa23.64■■□□□ 1.38
CCM2-206ENST00000474617 EMSYQ7Z589 1322 aa23.64■■□□□ 1.37
CCM2-206ENST00000474617 A0A087X0T9 212 aa23.64■■□□□ 1.37
CCM2-206ENST00000474617 TMEM150BA6NC51 233 aa23.64■■□□□ 1.37
CCM2-206ENST00000474617 ASB14A6NK59 587 aa23.64■■□□□ 1.37
CCM2-206ENST00000474617 ATP1A1P05023 1023 aaKnown RBP23.64■■□□□ 1.37
CCM2-206ENST00000474617 FAM228BP0C875 321 aa23.64■■□□□ 1.37
CCM2-206ENST00000474617 MXI1P50539 228 aa23.64■■□□□ 1.37
CCM2-206ENST00000474617 STRN3Q13033 797 aa23.64■■□□□ 1.37
CCM2-206ENST00000474617 KIAA0753Q2KHM9 967 aa23.64■■□□□ 1.37
CCM2-206ENST00000474617 EPC2Q52LR7 807 aa23.64■■□□□ 1.37
CCM2-206ENST00000474617 TMCO3Q6UWJ1 677 aa23.64■■□□□ 1.37
CCM2-206ENST00000474617 LMBR1Q8WVP7 490 aa23.64■■□□□ 1.37
CCM2-206ENST00000474617 RUBCNQ92622 972 aa23.64■■□□□ 1.37
CCM2-206ENST00000474617 MFSD14AQ96MC6 490 aa23.64■■□□□ 1.37
CCM2-206ENST00000474617 AZI2Q9H6S1 392 aa23.64■■□□□ 1.37
CCM2-206ENST00000474617 NAGPAQ9UK23 515 aa23.64■■□□□ 1.37
CCM2-206ENST00000474617 NENFQ9UMX5 172 aa23.64■■□□□ 1.37
CCM2-206ENST00000474617 CCDC151A5D8V7 595 aa23.63■■□□□ 1.37
CCM2-206ENST00000474617 TRIM49P0CI25 452 aa23.63■■□□□ 1.37
CCM2-206ENST00000474617 TRIM49CP0CI26 452 aa23.63■■□□□ 1.37
CCM2-206ENST00000474617 ARID5AQ03989 594 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms