RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 C12orf60Q5U649 245 aa8.3□□□□□ -1.08
VPS50-211ENST00000474412 CTR9Q6PD62 1173 aa8.3□□□□□ -1.08
VPS50-211ENST00000474412 C16orf86Q6ZW13 317 aa8.3□□□□□ -1.08
VPS50-211ENST00000474412 FAM168AQ92567 244 aa8.3□□□□□ -1.08
VPS50-211ENST00000474412 APPBP2Q92624 585 aa8.3□□□□□ -1.08
VPS50-211ENST00000474412 STRBPQ96SI9 672 aaKnown RBP8.3□□□□□ -1.08
VPS50-211ENST00000474412 MORF4L1Q9UBU8 362 aa8.3□□□□□ -1.08
VPS50-211ENST00000474412 PPT2Q9UMR5 302 aa8.3□□□□□ -1.08
VPS50-211ENST00000474412 TTC41PQ6P2S7 1318 aa8.29□□□□□ -1.08
VPS50-211ENST00000474412 SHISA3A0PJX4 238 aa8.29□□□□□ -1.08
VPS50-211ENST00000474412 FAM86C2PA6NEL3 165 aa8.29□□□□□ -1.08
VPS50-211ENST00000474412 C19orf81C9J6K1 198 aa8.29□□□□□ -1.08
VPS50-211ENST00000474412 TNFRSF10CO14798 259 aa8.29□□□□□ -1.08
VPS50-211ENST00000474412 RNF113AO15541 343 aaKnown RBP8.29□□□□□ -1.08
VPS50-211ENST00000474412 HOXA7P31268 230 aaPredicted RBP8.29□□□□□ -1.08
VPS50-211ENST00000474412 PRMT2P55345 433 aa8.29□□□□□ -1.08
VPS50-211ENST00000474412 ICA1Q05084 483 aa8.29□□□□□ -1.08
VPS50-211ENST00000474412 EGR3Q06889 387 aa8.29□□□□□ -1.08
VPS50-211ENST00000474412 TMED8Q6PL24 325 aaPredicted RBP8.29□□□□□ -1.08
VPS50-211ENST00000474412 RASGRP2Q7LDG7 609 aa8.29□□□□□ -1.08
VPS50-211ENST00000474412 SIAH1Q8IUQ4 282 aa8.29□□□□□ -1.08
VPS50-211ENST00000474412 SPICE1Q8N0Z3 855 aa8.29□□□□□ -1.08
VPS50-211ENST00000474412 TRIB2Q92519 343 aa8.29□□□□□ -1.08
VPS50-211ENST00000474412 VWCEQ96DN2 955 aa8.29□□□□□ -1.08
VPS50-211ENST00000474412 SLC6A18Q96N87 628 aa8.29□□□□□ -1.08
VPS50-211ENST00000474412 FSD1Q9BTV5 496 aa8.29□□□□□ -1.08
VPS50-211ENST00000474412 LNPKQ9C0E8 428 aa8.29□□□□□ -1.08
VPS50-211ENST00000474412 KIAA1683Q9H0B3 1180 aa8.29□□□□□ -1.08
VPS50-211ENST00000474412 RPAP3Q9H6T3 665 aaPredicted RBP8.29□□□□□ -1.08
VPS50-211ENST00000474412 ATP8A2Q9NTI2 1148 aa8.29□□□□□ -1.08
VPS50-211ENST00000474412 BTBD7Q9P203 1132 aa8.29□□□□□ -1.08
VPS50-211ENST00000474412 RBPJLQ9UBG7 517 aa8.29□□□□□ -1.08
VPS50-211ENST00000474412 ARPP21Q9UBL0 812 aaPredicted RBP8.29□□□□□ -1.08
VPS50-211ENST00000474412 PRDM1O75626 825 aa8.28□□□□□ -1.08
VPS50-211ENST00000474412 IGHDP01880 384 aa8.28□□□□□ -1.08
VPS50-211ENST00000474412 GDNFP39905 211 aa8.28□□□□□ -1.08
VPS50-211ENST00000474412 TXKP42681 527 aa8.28□□□□□ -1.08
VPS50-211ENST00000474412 AFMP43652 599 aa8.28□□□□□ -1.08
VPS50-211ENST00000474412 GCLCP48506 637 aaPredicted RBP8.28□□□□□ -1.08
VPS50-211ENST00000474412 NMIQ13287 307 aaPredicted RBP8.28□□□□□ -1.08
VPS50-211ENST00000474412 PABPC4Q13310 644 aaKnown RBP eCLIP8.28□□□□□ -1.08
VPS50-211ENST00000474412 ARHGEF6Q15052 776 aa8.28□□□□□ -1.08
VPS50-211ENST00000474412 CCL14Q16627 93 aa8.28□□□□□ -1.08
VPS50-211ENST00000474412 ANKRD45Q5TZF3 282 aa8.28□□□□□ -1.08
VPS50-211ENST00000474412 VPS53Q5VIR6 699 aa8.28□□□□□ -1.08
VPS50-211ENST00000474412 CATSPERGQ6ZRH7 1159 aa8.28□□□□□ -1.08
VPS50-211ENST00000474412 TMEM179Q6ZVK1 233 aa8.28□□□□□ -1.08
VPS50-211ENST00000474412 GPR142Q7Z601 462 aa8.28□□□□□ -1.08
VPS50-211ENST00000474412 GPRASP2Q96D09 838 aa8.28□□□□□ -1.08
VPS50-211ENST00000474412 GPATCH3Q96I76 525 aa8.28□□□□□ -1.08
VPS50-211ENST00000474412 SPATA32Q96LK8 384 aa8.28□□□□□ -1.08
VPS50-211ENST00000474412 MKRN2Q9H000 416 aaKnown RBP8.28□□□□□ -1.08
VPS50-211ENST00000474412 CABP5Q9NP86 173 aa8.28□□□□□ -1.08
VPS50-211ENST00000474412 GINM1Q9NU53 330 aa8.28□□□□□ -1.08
VPS50-211ENST00000474412 SWAP70Q9UH65 585 aa8.28□□□□□ -1.08
VPS50-211ENST00000474412 GJD2Q9UKL4 321 aa8.28□□□□□ -1.08
VPS50-211ENST00000474412 PCDHA11Q9Y5I1 949 aa8.28□□□□□ -1.08
VPS50-211ENST00000474412 GBF1Q92538 1859 aa8.28□□□□□ -1.08
VPS50-211ENST00000474412 DOCK5Q9H7D0 1870 aa8.28□□□□□ -1.08
VPS50-211ENST00000474412 KIAA1217Q5T5P2 1943 aa8.27□□□□□ -1.09
VPS50-211ENST00000474412 PLIN4Q96Q06 1357 aa8.27□□□□□ -1.09
VPS50-211ENST00000474412 DNAJC25-GNG10A0A024R161 153 aa8.27□□□□□ -1.09
VPS50-211ENST00000474412 A0A0D9SFI3 127 aa8.27□□□□□ -1.09
VPS50-211ENST00000474412 GLRX3O76003 335 aaKnown RBP8.27□□□□□ -1.09
VPS50-211ENST00000474412 EEF2P13639 858 aaKnown RBP8.27□□□□□ -1.09
VPS50-211ENST00000474412 CYP2B6P20813 491 aa8.27□□□□□ -1.09
VPS50-211ENST00000474412 HOXD10P28358 340 aa8.27□□□□□ -1.09
VPS50-211ENST00000474412 TDO2P48775 406 aa8.27□□□□□ -1.09
VPS50-211ENST00000474412 PDE1AP54750 535 aa8.27□□□□□ -1.09
VPS50-211ENST00000474412 HDAC1Q13547 482 aaPredicted RBP8.27□□□□□ -1.09
VPS50-211ENST00000474412 COL9A2Q14055 689 aaPredicted RBP8.27□□□□□ -1.09
VPS50-211ENST00000474412 ZSCAN25Q6NSZ9 544 aa8.27□□□□□ -1.09
VPS50-211ENST00000474412 ZSWIM9Q86XI8 627 aa8.27□□□□□ -1.09
VPS50-211ENST00000474412 SMC5Q8IY18 1101 aa8.27□□□□□ -1.09
VPS50-211ENST00000474412 TMEM192Q8IY95 271 aa8.27□□□□□ -1.09
VPS50-211ENST00000474412 DIS3LQ8TF46 1054 aaKnown RBP8.27□□□□□ -1.09
VPS50-211ENST00000474412 U2AF1L4Q8WU68 220 aaKnown RBP8.27□□□□□ -1.09
VPS50-211ENST00000474412 COA7Q96BR5 231 aa8.27□□□□□ -1.09
VPS50-211ENST00000474412 FAM227BQ96M60 508 aa8.27□□□□□ -1.09
VPS50-211ENST00000474412 SLC9A7Q96T83 725 aa8.27□□□□□ -1.09
VPS50-211ENST00000474412 NUP88Q99567 741 aaPredicted RBP8.27□□□□□ -1.09
VPS50-211ENST00000474412 TANGO6Q9C0B7 1094 aa8.27□□□□□ -1.09
VPS50-211ENST00000474412 FBXO28Q9NVF7 368 aa8.27□□□□□ -1.09
VPS50-211ENST00000474412 FLRT1Q9NZU1 646 aa8.27□□□□□ -1.09
VPS50-211ENST00000474412 TMEM59LQ9UK28 342 aa8.27□□□□□ -1.09
VPS50-211ENST00000474412 EFR3BQ9Y2G0 817 aa8.27□□□□□ -1.09
VPS50-211ENST00000474412 ERC2O15083 957 aa8.26□□□□□ -1.09
VPS50-211ENST00000474412 HMGCRP04035 888 aa8.26□□□□□ -1.09
VPS50-211ENST00000474412 RAC2P15153 192 aa8.26□□□□□ -1.09
VPS50-211ENST00000474412 GJA8P48165 433 aa8.26□□□□□ -1.09
VPS50-211ENST00000474412 HK2P52789 917 aa8.26□□□□□ -1.09
VPS50-211ENST00000474412 USP14P54578 494 aa8.26□□□□□ -1.09
VPS50-211ENST00000474412 KCNMB1Q16558 191 aa8.26□□□□□ -1.09
VPS50-211ENST00000474412 RALGPS1Q5JS13 557 aa8.26□□□□□ -1.09
VPS50-211ENST00000474412 WDR78Q5VTH9 848 aa8.26□□□□□ -1.09
VPS50-211ENST00000474412 CCDC81Q6ZN84 652 aa8.26□□□□□ -1.09
VPS50-211ENST00000474412 UBE2Q1Q7Z7E8 422 aa8.26□□□□□ -1.09
VPS50-211ENST00000474412 ZNF589Q86UQ0 364 aaPredicted RBP8.26□□□□□ -1.09
VPS50-211ENST00000474412 LRRC47Q8N1G4 583 aaKnown RBP8.26□□□□□ -1.09
VPS50-211ENST00000474412 GPRC5AQ8NFJ5 357 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms