RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 RALGAPA2Q2PPJ7 1873 aa12.44□□□□□ -0.42
CKS1B-206ENST00000474215 NCK2O43639 380 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 USO1O60763 962 aaKnown RBP12.43□□□□□ -0.42
CKS1B-206ENST00000474215 FGF18O76093 207 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 KCNA5P22460 613 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 CCT6AP40227 531 aaKnown RBP12.43□□□□□ -0.42
CKS1B-206ENST00000474215 PRPHP41219 470 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 RAB27AP51159 221 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 UBE3AQ05086 875 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 NCBP1Q09161 790 aaKnown RBP12.43□□□□□ -0.42
CKS1B-206ENST00000474215 CAPSQ13938 189 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 COL19A1Q14993 1142 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 PCBP1Q15365 356 aaKnown RBP eCLIP12.43□□□□□ -0.42
CKS1B-206ENST00000474215 LARP1BQ659C4 914 aaKnown RBP12.43□□□□□ -0.42
CKS1B-206ENST00000474215 HAUS3Q68CZ6 603 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 POTEGQ6S5H5 508 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 IFNLR1Q8IU57 520 aaPredicted RBP12.43□□□□□ -0.42
CKS1B-206ENST00000474215 THNSL1Q8IYQ7 743 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 LRRC43Q8N309 656 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 IGSF22Q8N9C0 903 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 HELQQ8TDG4 1101 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 ASAP3Q8TDY4 903 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 POF1BQ8WVV4 589 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 RSPH1Q8WYR4 309 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 PABPC5Q96DU9 382 aaKnown RBP12.43□□□□□ -0.42
CKS1B-206ENST00000474215 RAB34Q9BZG1 259 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.43□□□□□ -0.42
CKS1B-206ENST00000474215 FAM105AQ9NUU6 356 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 PCDHB2Q9Y5E7 798 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 STK24Q9Y6E0 443 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 CUL9Q8IWT3 2517 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 VCANP13611 3396 aa12.43□□□□□ -0.42
CKS1B-206ENST00000474215 NLRC5Q86WI3 1866 aa12.42□□□□□ -0.42
CKS1B-206ENST00000474215 ARHGEF35A5YM69 484 aa12.42□□□□□ -0.42
CKS1B-206ENST00000474215 INO80B-WBP1J3KQ70 363 aa12.42□□□□□ -0.42
CKS1B-206ENST00000474215 ERLIN2O94905 339 aa12.42□□□□□ -0.42
CKS1B-206ENST00000474215 GLRA2P23416 452 aa12.42□□□□□ -0.42
CKS1B-206ENST00000474215 HYAL1Q12794 435 aa12.42□□□□□ -0.42
CKS1B-206ENST00000474215 CUL4AQ13619 759 aa12.42□□□□□ -0.42
CKS1B-206ENST00000474215 LEXMQ3ZCV2 418 aa12.42□□□□□ -0.42
CKS1B-206ENST00000474215 LONRF3Q496Y0 759 aa12.42□□□□□ -0.42
CKS1B-206ENST00000474215 PADI6Q6TGC4 694 aa12.42□□□□□ -0.42
CKS1B-206ENST00000474215 KCNT2Q6UVM3 1135 aa12.42□□□□□ -0.42
CKS1B-206ENST00000474215 GLB1LQ6UWU2 654 aa12.42□□□□□ -0.42
CKS1B-206ENST00000474215 DTHD1Q6ZMT9 781 aa12.42□□□□□ -0.42
CKS1B-206ENST00000474215 MAEAQ7L5Y9 396 aa12.42□□□□□ -0.42
CKS1B-206ENST00000474215 MRPL10Q7Z7H8 261 aaKnown RBP12.42□□□□□ -0.42
CKS1B-206ENST00000474215 MCPH1Q8NEM0 835 aa12.42□□□□□ -0.42
CKS1B-206ENST00000474215 MICAL1Q8TDZ2 1067 aa12.42□□□□□ -0.42
CKS1B-206ENST00000474215 LPPQ93052 612 aa12.42□□□□□ -0.42
CKS1B-206ENST00000474215 PGBD4Q96DM1 585 aa12.42□□□□□ -0.42
CKS1B-206ENST00000474215 ZNF558Q96NG5 402 aa12.42□□□□□ -0.42
CKS1B-206ENST00000474215 MRPL9Q9BYD2 267 aaKnown RBP12.42□□□□□ -0.42
CKS1B-206ENST00000474215 NFKBIZQ9BYH8 718 aa12.42□□□□□ -0.42
CKS1B-206ENST00000474215 POLR3FQ9H1D9 316 aaPredicted RBP12.42□□□□□ -0.42
CKS1B-206ENST00000474215 TNFRSF10AO00220 468 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 TSPAN1O60635 241 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 CSPG5O95196 566 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 CYP11B2P19099 503 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 AXLP30530 894 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 IRS1P35568 1242 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 PPM1AP35813 382 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 PLCB3Q01970 1234 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 KRT17Q04695 432 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 MBTD1Q05BQ5 628 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 IL17AQ16552 155 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 ECM1Q16610 540 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 CTC1Q2NKJ3 1217 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 NOMO2Q5JPE7 1267 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 UBXN11Q5T124 520 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 PDE12Q6L8Q7 609 aaKnown RBP12.41□□□□□ -0.42
CKS1B-206ENST00000474215 EP400NLQ6ZTU2 488 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 PPP2R3CQ969Q6 453 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 UHRF1Q96T88 793 aaPredicted RBP12.41□□□□□ -0.42
CKS1B-206ENST00000474215 IGFLR1Q9H665 355 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 GPRC5CQ9NQ84 441 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 CLDND1Q9NY35 253 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 SPG21Q9NZD8 308 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 PUF60Q9UHX1 559 aaKnown RBP12.41□□□□□ -0.42
CKS1B-206ENST00000474215 KIAA1024Q9UPX6 916 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 LZTS1Q9Y250 596 aa12.41□□□□□ -0.42
CKS1B-206ENST00000474215 MEIS3P2A8K0S8 358 aa12.4□□□□□ -0.42
CKS1B-206ENST00000474215 H3BQ06 376 aaPredicted RBP12.4□□□□□ -0.42
CKS1B-206ENST00000474215 OFD1O75665 1012 aa12.4□□□□□ -0.42
CKS1B-206ENST00000474215 GTF2F1P35269 517 aaKnown RBP eCLIP12.4□□□□□ -0.42
CKS1B-206ENST00000474215 ALDH7A1P49419 539 aaKnown RBP12.4□□□□□ -0.42
CKS1B-206ENST00000474215 ERVFC1P60507 584 aa12.4□□□□□ -0.42
CKS1B-206ENST00000474215 ATP2C1P98194 919 aaPredicted RBP12.4□□□□□ -0.42
CKS1B-206ENST00000474215 ADAM15Q13444 863 aa12.4□□□□□ -0.42
CKS1B-206ENST00000474215 AMHR2Q16671 573 aa12.4□□□□□ -0.42
CKS1B-206ENST00000474215 PUS10Q3MIT2 529 aaKnown RBP12.4□□□□□ -0.42
CKS1B-206ENST00000474215 KRT79Q5XKE5 535 aa12.4□□□□□ -0.42
CKS1B-206ENST00000474215 NOTUMQ6P988 496 aa12.4□□□□□ -0.42
CKS1B-206ENST00000474215 AGMOQ6ZNB7 445 aa12.4□□□□□ -0.42
CKS1B-206ENST00000474215 CNNM3Q8NE01 707 aa12.4□□□□□ -0.42
CKS1B-206ENST00000474215 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.4□□□□□ -0.42
CKS1B-206ENST00000474215 SNX29Q8TEQ0 813 aa12.4□□□□□ -0.42
CKS1B-206ENST00000474215 MRPS27Q92552 414 aaKnown RBP12.4□□□□□ -0.42
CKS1B-206ENST00000474215 CCDC51Q96ER9 411 aa12.4□□□□□ -0.42
CKS1B-206ENST00000474215 BHMT2Q9H2M3 363 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms