RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 SLC7A3Q8WY07 619 aa27.76■■■□□ 2.03
PKD1-211ENST00000474088 HAS1Q92839 578 aa27.76■■■□□ 2.03
PKD1-211ENST00000474088 NAP1L4Q99733 375 aaKnown RBP27.76■■■□□ 2.03
PKD1-211ENST00000474088 WRAP73Q9P2S5 460 aaPredicted RBP27.76■■■□□ 2.03
PKD1-211ENST00000474088 PPME1Q9Y570 386 aa27.76■■■□□ 2.03
PKD1-211ENST00000474088 COL4A3BPQ9Y5P4 624 aa27.76■■■□□ 2.03
PKD1-211ENST00000474088 MEIS3P2A8K0S8 358 aa27.75■■■□□ 2.03
PKD1-211ENST00000474088 DTNBO60941 627 aa27.75■■■□□ 2.03
PKD1-211ENST00000474088 CLASP2O75122 1294 aaKnown RBP27.75■■■□□ 2.03
PKD1-211ENST00000474088 ZC3H11AO75152 810 aaKnown RBP eCLIP27.75■■■□□ 2.03
PKD1-211ENST00000474088 CXCL14O95715 111 aa27.75■■■□□ 2.03
PKD1-211ENST00000474088 EPHA7Q15375 998 aa27.75■■■□□ 2.03
PKD1-211ENST00000474088 GLB1LQ6UWU2 654 aa27.75■■■□□ 2.03
PKD1-211ENST00000474088 ALYREFQ86V81 257 aaKnown RBP27.75■■■□□ 2.03
PKD1-211ENST00000474088 PBXIP1Q96AQ6 731 aa27.75■■■□□ 2.03
PKD1-211ENST00000474088 DHX33Q9H6R0 707 aaKnown RBP27.75■■■□□ 2.03
PKD1-211ENST00000474088 NRDE2Q9H7Z3 1164 aa27.75■■■□□ 2.03
PKD1-211ENST00000474088 TBC1D13Q9NVG8 400 aa27.75■■■□□ 2.03
PKD1-211ENST00000474088 CARNS1A5YM72 827 aa27.74■■■□□ 2.03
PKD1-211ENST00000474088 MARCH6O60337 910 aa27.74■■■□□ 2.03
PKD1-211ENST00000474088 OFD1O75665 1012 aa27.74■■■□□ 2.03
PKD1-211ENST00000474088 TPRNQ4KMQ1 711 aa27.74■■■□□ 2.03
PKD1-211ENST00000474088 NOMO2Q5JPE7 1267 aa27.74■■■□□ 2.03
PKD1-211ENST00000474088 C4orf19Q8IY42 314 aa27.74■■■□□ 2.03
PKD1-211ENST00000474088 VPS52Q8N1B4 723 aa27.74■■■□□ 2.03
PKD1-211ENST00000474088 PRPF31Q8WWY3 499 aaKnown RBP27.74■■■□□ 2.03
PKD1-211ENST00000474088 CTDNEP1O95476 244 aa27.73■■■□□ 2.03
PKD1-211ENST00000474088 GALTP07902 379 aa27.73■■■□□ 2.03
PKD1-211ENST00000474088 CA8P35219 290 aa27.73■■■□□ 2.03
PKD1-211ENST00000474088 RFC5P40937 340 aa27.73■■■□□ 2.03
PKD1-211ENST00000474088 POLGP54098 1239 aaPredicted RBP27.73■■■□□ 2.03
PKD1-211ENST00000474088 NHLH1Q02575 133 aa27.73■■■□□ 2.03
PKD1-211ENST00000474088 DDX53Q86TM3 631 aaKnown RBP27.73■■■□□ 2.03
PKD1-211ENST00000474088 TMEM173Q86WV6 379 aaPredicted RBP27.73■■■□□ 2.03
PKD1-211ENST00000474088 TMEM143Q96AN5 459 aa27.73■■■□□ 2.03
PKD1-211ENST00000474088 PGBD4Q96DM1 585 aa27.73■■■□□ 2.03
PKD1-211ENST00000474088 IGSF21Q96ID5 467 aa27.73■■■□□ 2.03
PKD1-211ENST00000474088 ZBP1Q9H171 429 aa27.73■■■□□ 2.03
PKD1-211ENST00000474088 AGPAT5Q9NUQ2 364 aa27.73■■■□□ 2.03
PKD1-211ENST00000474088 INPP5FQ9Y2H2 1132 aa27.73■■■□□ 2.03
PKD1-211ENST00000474088 SRGAP2CP0DJJ0 459 aa27.72■■■□□ 2.03
PKD1-211ENST00000474088 EARS2Q5JPH6 523 aaKnown RBP27.72■■■□□ 2.03
PKD1-211ENST00000474088 OTUD6AQ7L8S5 288 aa27.72■■■□□ 2.03
PKD1-211ENST00000474088 SRGAP1Q7Z6B7 1085 aa27.72■■■□□ 2.03
PKD1-211ENST00000474088 PSPC1Q8WXF1 523 aaKnown RBP27.72■■■□□ 2.03
PKD1-211ENST00000474088 LXNQ9BS40 222 aa27.72■■■□□ 2.03
PKD1-211ENST00000474088 ADAM7Q9H2U9 754 aa27.72■■■□□ 2.03
PKD1-211ENST00000474088 RGL1Q9NZL6 768 aa27.72■■■□□ 2.03
PKD1-211ENST00000474088 ORC3Q9UBD5 711 aaPredicted RBP27.72■■■□□ 2.03
PKD1-211ENST00000474088 PCDHB2Q9Y5E7 798 aa27.72■■■□□ 2.03
PKD1-211ENST00000474088 TECTAO75443 2155 aa27.71■■■□□ 2.03
PKD1-211ENST00000474088 YWHABP31946 246 aaKnown RBP27.71■■■□□ 2.03
PKD1-211ENST00000474088 RNASELQ05823 741 aaKnown RBP27.71■■■□□ 2.03
PKD1-211ENST00000474088 ITIH3Q06033 890 aa27.71■■■□□ 2.03
PKD1-211ENST00000474088 SIGLEC14Q08ET2 396 aa27.71■■■□□ 2.03
PKD1-211ENST00000474088 LAMTOR4Q0VGL1 99 aa27.71■■■□□ 2.03
PKD1-211ENST00000474088 NCAPH2Q6IBW4 605 aa27.71■■■□□ 2.03
PKD1-211ENST00000474088 CES5AQ6NT32 575 aa27.71■■■□□ 2.03
PKD1-211ENST00000474088 MRPL10Q7Z7H8 261 aaKnown RBP27.71■■■□□ 2.03
PKD1-211ENST00000474088 POTEDQ86YR6 584 aa27.71■■■□□ 2.03
PKD1-211ENST00000474088 WASF1Q92558 559 aa27.71■■■□□ 2.03
PKD1-211ENST00000474088 MINDY3Q9H8M7 445 aa27.71■■■□□ 2.03
PKD1-211ENST00000474088 CDH22Q9UJ99 828 aa27.71■■■□□ 2.03
PKD1-211ENST00000474088 IRAK3Q9Y616 596 aa27.71■■■□□ 2.03
PKD1-211ENST00000474088 BAG4O95429 457 aaKnown RBP27.7■■■□□ 2.02
PKD1-211ENST00000474088 CTSAP10619 480 aa27.7■■■□□ 2.02
PKD1-211ENST00000474088 GIT2Q14161 759 aa27.7■■■□□ 2.02
PKD1-211ENST00000474088 ANKRD1Q15327 319 aa27.7■■■□□ 2.02
PKD1-211ENST00000474088 PTPN21Q16825 1174 aa27.7■■■□□ 2.02
PKD1-211ENST00000474088 AGMOQ6ZNB7 445 aa27.7■■■□□ 2.02
PKD1-211ENST00000474088 SLFN12Q8IYM2 578 aa27.7■■■□□ 2.02
PKD1-211ENST00000474088 TCP11Q8WWU5 503 aa27.7■■■□□ 2.02
PKD1-211ENST00000474088 AUTS2Q8WXX7 1259 aa27.7■■■□□ 2.02
PKD1-211ENST00000474088 DYDC2Q96IM9 177 aa27.7■■■□□ 2.02
PKD1-211ENST00000474088 ZSWIM4Q9H7M6 989 aa27.7■■■□□ 2.02
PKD1-211ENST00000474088 BMP2KQ9NSY1 1161 aaPredicted RBP27.7■■■□□ 2.02
PKD1-211ENST00000474088 DNAJB4Q9UDY4 337 aa27.7■■■□□ 2.02
PKD1-211ENST00000474088 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.69■■■□□ 2.02
PKD1-211ENST00000474088 ASAP2O43150 1006 aa27.69■■■□□ 2.02
PKD1-211ENST00000474088 GAS2O43903 313 aaKnown RBP27.69■■■□□ 2.02
PKD1-211ENST00000474088 FDPSP14324 419 aaKnown RBP27.69■■■□□ 2.02
PKD1-211ENST00000474088 SP100P23497 879 aaPredicted RBP27.69■■■□□ 2.02
PKD1-211ENST00000474088 HOXA11P31270 313 aaPredicted RBP27.69■■■□□ 2.02
PKD1-211ENST00000474088 AK2P54819 239 aa27.69■■■□□ 2.02
PKD1-211ENST00000474088 ANAPC15P60006 121 aa27.69■■■□□ 2.02
PKD1-211ENST00000474088 SPIRE1Q08AE8 756 aa27.69■■■□□ 2.02
PKD1-211ENST00000474088 CTTNQ14247 550 aaKnown RBP27.69■■■□□ 2.02
PKD1-211ENST00000474088 XKR9Q5GH70 373 aa27.69■■■□□ 2.02
PKD1-211ENST00000474088 ZNF280BQ86YH2 543 aa27.69■■■□□ 2.02
PKD1-211ENST00000474088 TMEM87AQ8NBN3 555 aa27.69■■■□□ 2.02
PKD1-211ENST00000474088 BCL7CQ8WUZ0 217 aaPredicted RBP27.69■■■□□ 2.02
PKD1-211ENST00000474088 NECTIN4Q96NY8 510 aa27.69■■■□□ 2.02
PKD1-211ENST00000474088 GBP3Q9H0R5 595 aa27.69■■■□□ 2.02
PKD1-211ENST00000474088 NR2E1Q9Y466 385 aa27.69■■■□□ 2.02
PKD1-211ENST00000474088 FAM205CA6NFA0 338 aa27.68■■■□□ 2.02
PKD1-211ENST00000474088 ZBTB39O15060 712 aa27.68■■■□□ 2.02
PKD1-211ENST00000474088 KRT2P35908 639 aa27.68■■■□□ 2.02
PKD1-211ENST00000474088 SLC11A1P49279 550 aa27.68■■■□□ 2.02
PKD1-211ENST00000474088 NR5A1Q13285 461 aa27.68■■■□□ 2.02
PKD1-211ENST00000474088 EMC2Q15006 297 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms