RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 SOX10P56693 466 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 ZNF200P98182 395 aaPredicted RBP8.41□□□□□ -1.06
CCDC93-207ENST00000474006 KCNA1Q09470 495 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 TBC1D8BQ0IIM8 1120 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 DPYDQ12882 1025 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 PPFIA1Q13136 1202 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 POSTNQ15063 836 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 GRIK4Q16099 956 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 MARCH8Q5T0T0 291 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 CCDC183Q5T5S1 534 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 CNNM4Q6P4Q7 775 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 MTHFD1LQ6UB35 978 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 EXOC8Q8IYI6 725 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 DNAJC19Q96DA6 116 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 ZBTB10Q96DT7 871 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 GLT1D1Q96MS3 346 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 TRIM9Q9C026 710 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 DHX33Q9H6R0 707 aaKnown RBP8.41□□□□□ -1.06
CCDC93-207ENST00000474006 SUGCTQ9HAC7 445 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 KCND2Q9NZV8 630 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 TMEM63CQ9P1W3 806 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 ZMIZ1Q9ULJ6 1067 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 NOVA2Q9UNW9 492 aaKnown RBP8.41□□□□□ -1.06
CCDC93-207ENST00000474006 PHF24Q9UPV7 400 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 PPME1Q9Y570 386 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 PCDHA5Q9Y5H7 936 aa8.41□□□□□ -1.06
CCDC93-207ENST00000474006 RBBP6Q7Z6E9 1792 aaKnown RBP8.4□□□□□ -1.06
CCDC93-207ENST00000474006 IGKV6-21A0A0C4DH24 114 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 A0A1W2PQ45 241 aaPredicted RBP8.4□□□□□ -1.06
CCDC93-207ENST00000474006 A0A1W2PQY0 241 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 C17orf102A2RUQ5 167 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 MAGEB2O15479 319 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 USO1O60763 962 aaKnown RBP8.4□□□□□ -1.06
CCDC93-207ENST00000474006 HIP1RO75146 1068 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 LETM1O95202 739 aaPredicted RBP8.4□□□□□ -1.06
CCDC93-207ENST00000474006 SMC2O95347 1197 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 RPN1P04843 607 aaKnown RBP8.4□□□□□ -1.06
CCDC93-207ENST00000474006 MYL1P05976 194 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 GNAT1P11488 350 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 IDEP14735 1019 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 GUCY2CP25092 1073 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 VARSP26640 1264 aaKnown RBP8.4□□□□□ -1.06
CCDC93-207ENST00000474006 SARSP49591 514 aaKnown RBP8.4□□□□□ -1.06
CCDC93-207ENST00000474006 POLGP54098 1239 aaPredicted RBP8.4□□□□□ -1.06
CCDC93-207ENST00000474006 ASIC1P78348 528 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 ADAM17P78536 824 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 PTK7Q13308 1070 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 ITGA7Q13683 1181 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 CRTC2Q53ET0 693 aaPredicted RBP8.4□□□□□ -1.06
CCDC93-207ENST00000474006 FAM47CQ5HY64 1035 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 PLA2G2CQ5R387 149 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 FAM102BQ5T8I3 360 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 COL13A1Q5TAT6 717 aaPredicted RBP8.4□□□□□ -1.06
CCDC93-207ENST00000474006 EFCAB12Q6NXP0 572 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 NFRKBQ6P4R8 1299 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 METTL13Q8N6R0 699 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 SLC43A3Q8NBI5 491 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 SPATA20Q8TB22 786 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 SLC7A3Q8WY07 619 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 SYAP1Q96A49 352 aaPredicted RBP8.4□□□□□ -1.06
CCDC93-207ENST00000474006 TMEM143Q96AN5 459 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 REEP2Q9BRK0 252 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 SENP6Q9GZR1 1112 aaPredicted RBP8.4□□□□□ -1.06
CCDC93-207ENST00000474006 ZHX3Q9H4I2 956 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 ATP6V0A4Q9HBG4 840 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 GPRC5CQ9NQ84 441 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 XPNPEP1Q9NQW7 623 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 STARD7Q9NQZ5 370 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 PANK4Q9NVE7 773 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 DOLKQ9UPQ8 538 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 MAP4K5Q9Y4K4 846 aa8.4□□□□□ -1.06
CCDC93-207ENST00000474006 MGAMO43451 1857 aa8.4□□□□□ -1.07
CCDC93-207ENST00000474006 HTTP42858 3142 aa8.4□□□□□ -1.07
CCDC93-207ENST00000474006 COL1A2P08123 1366 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 PVALEFA0A1B0GWK0 134 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 MBLAC1A4D2B0 266 aaPredicted RBP8.39□□□□□ -1.07
CCDC93-207ENST00000474006 RSPH10B2B2RC85 870 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 ARVCFO00192 962 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 TREHO43280 583 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 KLRC4O43908 158 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 C22orf31O95567 290 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 RSPH10BP0C881 870 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 CAPN2P17655 700 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 EN2P19622 333 aaPredicted RBP8.39□□□□□ -1.07
CCDC93-207ENST00000474006 HOXC8P31273 242 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 ARL2P36404 184 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 DNM2P50570 870 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 CDK7P50613 346 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 DRP2Q13474 957 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 EMC2Q15006 297 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 HERC4Q5GLZ8 1057 aaPredicted RBP8.39□□□□□ -1.07
CCDC93-207ENST00000474006 NT5DC1Q5TFE4 455 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 IER5Q5VY09 327 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 ISM2Q6H9L7 571 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 GDF6Q6KF10 455 aaPredicted RBP8.39□□□□□ -1.07
CCDC93-207ENST00000474006 UNC13DQ70J99 1090 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 SESTD1Q86VW0 696 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 KIAA0319LQ8IZA0 1049 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 DAW1Q8N136 415 aa8.39□□□□□ -1.07
CCDC93-207ENST00000474006 LRRC71Q8N4P6 559 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms