RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 MICAL3Q7RTP6 2002 aa13.72□□□□□ -0.21
DDX56-209ENST00000473924 A0A1B0GVL5 298 aa13.71□□□□□ -0.21
DDX56-209ENST00000473924 MGEA5O60502 916 aa13.71□□□□□ -0.21
DDX56-209ENST00000473924 FAM13AO94988 1023 aa13.71□□□□□ -0.21
DDX56-209ENST00000473924 PLS3P13797 630 aa13.71□□□□□ -0.21
DDX56-209ENST00000473924 LIG1P18858 919 aa13.71□□□□□ -0.21
DDX56-209ENST00000473924 SMTNP53814 917 aa13.71□□□□□ -0.21
DDX56-209ENST00000473924 SMAD3P84022 425 aaKnown RBP13.71□□□□□ -0.21
DDX56-209ENST00000473924 MAPK7Q13164 816 aa13.71□□□□□ -0.21
DDX56-209ENST00000473924 PCBP1Q15365 356 aaKnown RBP eCLIP13.71□□□□□ -0.21
DDX56-209ENST00000473924 TMEM132AQ24JP5 1023 aa13.71□□□□□ -0.21
DDX56-209ENST00000473924 SLC24A5Q71RS6 500 aa13.71□□□□□ -0.21
DDX56-209ENST00000473924 DYMQ7RTS9 669 aa13.71□□□□□ -0.21
DDX56-209ENST00000473924 TMCO2Q7Z6W1 182 aaPredicted RBP13.71□□□□□ -0.21
DDX56-209ENST00000473924 RTN4RL1Q86UN2 441 aaPredicted RBP13.71□□□□□ -0.21
DDX56-209ENST00000473924 HERC6Q8IVU3 1022 aa13.71□□□□□ -0.21
DDX56-209ENST00000473924 DAW1Q8N136 415 aa13.71□□□□□ -0.21
DDX56-209ENST00000473924 LINC01599Q8WXQ3 324 aa13.71□□□□□ -0.21
DDX56-209ENST00000473924 LRRC27Q9C0I9 530 aa13.71□□□□□ -0.21
DDX56-209ENST00000473924 KMT5AQ9NQR1 393 aa13.71□□□□□ -0.21
DDX56-209ENST00000473924 CHST12Q9NRB3 414 aa13.71□□□□□ -0.21
DDX56-209ENST00000473924 RGS18Q9NS28 235 aa13.71□□□□□ -0.21
DDX56-209ENST00000473924 C1orf112Q9NSG2 853 aa13.71□□□□□ -0.21
DDX56-209ENST00000473924 RNF216Q9NWF9 866 aaPredicted RBP13.71□□□□□ -0.21
DDX56-209ENST00000473924 DACT1Q9NYF0 836 aa13.71□□□□□ -0.21
DDX56-209ENST00000473924 LARSQ9P2J5 1176 aaKnown RBP13.71□□□□□ -0.21
DDX56-209ENST00000473924 MSRAQ9UJ68 235 aa13.71□□□□□ -0.21
DDX56-209ENST00000473924 LRFN2Q9ULH4 789 aa13.71□□□□□ -0.21
DDX56-209ENST00000473924 TRIOBPQ9H2D6 2365 aa13.71□□□□□ -0.22
DDX56-209ENST00000473924 A0A1W2PQ27 194 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 A0A1W2PQ64 194 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 A0A1W2PQD8 194 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 TLL1O43897 1013 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 STAG3L1P0CL83 205 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 PFKFB1P16118 471 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 NPTX2P47972 431 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 EFNA5P52803 228 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 RABGGTBP53611 331 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 AMPD3Q01432 767 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 MBTD1Q05BQ5 628 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 GIT2Q14161 759 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 RAB30Q15771 203 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 E2F4Q16254 413 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 MAPK6Q16659 721 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 CDCA2Q69YH5 1023 aaPredicted RBP13.7□□□□□ -0.22
DDX56-209ENST00000473924 TWF2Q6IBS0 349 aaKnown RBP13.7□□□□□ -0.22
DDX56-209ENST00000473924 CEP57L1Q8IYX8 460 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 MYCT1Q8N699 235 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 FSIP1Q8NA03 581 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 MRPS27Q92552 414 aaKnown RBP13.7□□□□□ -0.22
DDX56-209ENST00000473924 DDX12PQ92771 950 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 TOP1MTQ969P6 601 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 KIFC3Q9BVG8 833 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 TNMDQ9H2S6 317 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 PARVGQ9HBI0 331 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 AGPAT5Q9NUQ2 364 aa13.7□□□□□ -0.22
DDX56-209ENST00000473924 PRMT7Q9NVM4 692 aaPredicted RBP13.7□□□□□ -0.22
DDX56-209ENST00000473924 RANBP2P49792 3224 aaKnown RBP13.69□□□□□ -0.22
DDX56-209ENST00000473924 MYMKA6NI61 221 aa13.69□□□□□ -0.22
DDX56-209ENST00000473924 K7ERI5 159 aa13.69□□□□□ -0.22
DDX56-209ENST00000473924 SOX1O00570 391 aaPredicted RBP13.69□□□□□ -0.22
DDX56-209ENST00000473924 TSPAN1O60635 241 aa13.69□□□□□ -0.22
DDX56-209ENST00000473924 GJB5O95377 273 aa13.69□□□□□ -0.22
DDX56-209ENST00000473924 PRKCBP05771 671 aa13.69□□□□□ -0.22
DDX56-209ENST00000473924 IDEP14735 1019 aa13.69□□□□□ -0.22
DDX56-209ENST00000473924 AXLP30530 894 aa13.69□□□□□ -0.22
DDX56-209ENST00000473924 SARSP49591 514 aaKnown RBP13.69□□□□□ -0.22
DDX56-209ENST00000473924 DSC3Q14574 896 aa13.69□□□□□ -0.22
DDX56-209ENST00000473924 NPAS4Q8IUM7 802 aa13.69□□□□□ -0.22
DDX56-209ENST00000473924 STAMQ92783 540 aa13.69□□□□□ -0.22
DDX56-209ENST00000473924 CPB2Q96IY4 423 aa13.69□□□□□ -0.22
DDX56-209ENST00000473924 YME1L1Q96TA2 773 aa13.69□□□□□ -0.22
DDX56-209ENST00000473924 PBX4Q9BYU1 374 aa13.69□□□□□ -0.22
DDX56-209ENST00000473924 MAGEF1Q9HAY2 307 aa13.69□□□□□ -0.22
DDX56-209ENST00000473924 PCDHB7Q9Y5E2 793 aa13.69□□□□□ -0.22
DDX56-209ENST00000473924 PCDHA11Q9Y5I1 949 aa13.69□□□□□ -0.22
DDX56-209ENST00000473924 MYH11P35749 1972 aa13.69□□□□□ -0.22
DDX56-209ENST00000473924 PHLPP2Q6ZVD8 1323 aa13.68□□□□□ -0.22
DDX56-209ENST00000473924 ADGRA3Q8IWK6 1321 aa13.68□□□□□ -0.22
DDX56-209ENST00000473924 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.68□□□□□ -0.22
DDX56-209ENST00000473924 C9IYK1 514 aa13.68□□□□□ -0.22
DDX56-209ENST00000473924 H0YCG3 227 aa13.68□□□□□ -0.22
DDX56-209ENST00000473924 SLC16A4O15374 487 aa13.68□□□□□ -0.22
DDX56-209ENST00000473924 SKIP12755 728 aa13.68□□□□□ -0.22
DDX56-209ENST00000473924 DNAJB2P25686 324 aa13.68□□□□□ -0.22
DDX56-209ENST00000473924 PBX2P40425 430 aa13.68□□□□□ -0.22
DDX56-209ENST00000473924 SYKP43405 635 aa13.68□□□□□ -0.22
DDX56-209ENST00000473924 NDUFA8P51970 172 aa13.68□□□□□ -0.22
DDX56-209ENST00000473924 PRPF4BQ13523 1007 aaKnown RBP13.68□□□□□ -0.22
DDX56-209ENST00000473924 NOTUMQ6P988 496 aa13.68□□□□□ -0.22
DDX56-209ENST00000473924 RNF169Q8NCN4 708 aa13.68□□□□□ -0.22
DDX56-209ENST00000473924 SPIRE2Q8WWL2 714 aa13.68□□□□□ -0.22
DDX56-209ENST00000473924 LRCH3Q96II8 777 aa13.68□□□□□ -0.22
DDX56-209ENST00000473924 PRIMPOLQ96LW4 560 aa13.68□□□□□ -0.22
DDX56-209ENST00000473924 RAD9AQ99638 391 aa13.68□□□□□ -0.22
DDX56-209ENST00000473924 NTPCRQ9BSD7 190 aaKnown RBP13.68□□□□□ -0.22
DDX56-209ENST00000473924 FZD8Q9H461 694 aa13.68□□□□□ -0.22
DDX56-209ENST00000473924 KBTBD4Q9NVX7 518 aa13.68□□□□□ -0.22
DDX56-209ENST00000473924 USP25Q9UHP3 1055 aa13.68□□□□□ -0.22
DDX56-209ENST00000473924 SERTAD1Q9UHV2 236 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms