RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 BACH2Q9BYV9 841 aa12.81□□□□□ -0.36
CPNE1-222ENST00000473373 TRIM6Q9C030 488 aaPredicted RBP12.81□□□□□ -0.36
CPNE1-222ENST00000473373 TMEM117Q9H0C3 514 aa12.81□□□□□ -0.36
CPNE1-222ENST00000473373 LMAN2LQ9H0V9 348 aa12.81□□□□□ -0.36
CPNE1-222ENST00000473373 POLR3FQ9H1D9 316 aaPredicted RBP12.81□□□□□ -0.36
CPNE1-222ENST00000473373 NSUN3Q9H649 340 aaKnown RBP12.81□□□□□ -0.36
CPNE1-222ENST00000473373 CHST12Q9NRB3 414 aa12.81□□□□□ -0.36
CPNE1-222ENST00000473373 INPP5FQ9Y2H2 1132 aa12.81□□□□□ -0.36
CPNE1-222ENST00000473373 HCN4Q9Y3Q4 1203 aa12.81□□□□□ -0.36
CPNE1-222ENST00000473373 PCDHB6Q9Y5E3 794 aa12.81□□□□□ -0.36
CPNE1-222ENST00000473373 LAD1O00515 517 aa12.8□□□□□ -0.36
CPNE1-222ENST00000473373 MED24O75448 989 aa12.8□□□□□ -0.36
CPNE1-222ENST00000473373 LYPLA2O95372 231 aa12.8□□□□□ -0.36
CPNE1-222ENST00000473373 LAG3P18627 525 aa12.8□□□□□ -0.36
CPNE1-222ENST00000473373 LIG1P18858 919 aa12.8□□□□□ -0.36
CPNE1-222ENST00000473373 PDCP20941 246 aa12.8□□□□□ -0.36
CPNE1-222ENST00000473373 RARRES1P49788 294 aa12.8□□□□□ -0.36
CPNE1-222ENST00000473373 DSC3Q14574 896 aa12.8□□□□□ -0.36
CPNE1-222ENST00000473373 ZBTB8OSQ8IWT0 167 aa12.8□□□□□ -0.36
CPNE1-222ENST00000473373 KLHL23Q8NBE8 558 aa12.8□□□□□ -0.36
CPNE1-222ENST00000473373 MCPH1Q8NEM0 835 aa12.8□□□□□ -0.36
CPNE1-222ENST00000473373 HELQQ8TDG4 1101 aa12.8□□□□□ -0.36
CPNE1-222ENST00000473373 CLP1Q92989 425 aaKnown RBP12.8□□□□□ -0.36
CPNE1-222ENST00000473373 PGBD4Q96DM1 585 aa12.8□□□□□ -0.36
CPNE1-222ENST00000473373 CEP89Q96ST8 783 aa12.8□□□□□ -0.36
CPNE1-222ENST00000473373 HSD17B14Q9BPX1 270 aa12.8□□□□□ -0.36
CPNE1-222ENST00000473373 POLR3CQ9BUI4 534 aaPredicted RBP12.8□□□□□ -0.36
CPNE1-222ENST00000473373 MRPL9Q9BYD2 267 aaKnown RBP12.8□□□□□ -0.36
CPNE1-222ENST00000473373 IGFLR1Q9H665 355 aa12.8□□□□□ -0.36
CPNE1-222ENST00000473373 CD320Q9NPF0 282 aa12.8□□□□□ -0.36
CPNE1-222ENST00000473373 TYW1Q9NV66 732 aaKnown RBP12.8□□□□□ -0.36
CPNE1-222ENST00000473373 MYH15Q9Y2K3 1946 aa12.8□□□□□ -0.36
CPNE1-222ENST00000473373 A0A0U1RQF3 1178 aa12.79□□□□□ -0.36
CPNE1-222ENST00000473373 C5orf67F2Z3F1 127 aa12.79□□□□□ -0.36
CPNE1-222ENST00000473373 GRM6O15303 877 aa12.79□□□□□ -0.36
CPNE1-222ENST00000473373 EOMESO95936 686 aa12.79□□□□□ -0.36
CPNE1-222ENST00000473373 XRCC6P12956 609 aaKnown RBP eCLIP12.79□□□□□ -0.36
CPNE1-222ENST00000473373 RPA1P27694 616 aa12.79□□□□□ -0.36
CPNE1-222ENST00000473373 FXR2P51116 673 aaKnown RBP eCLIP12.79□□□□□ -0.36
CPNE1-222ENST00000473373 CSPP1Q1MSJ5 1256 aa12.79□□□□□ -0.36
CPNE1-222ENST00000473373 NAALADL2Q58DX5 795 aa12.79□□□□□ -0.36
CPNE1-222ENST00000473373 GLB1LQ6UWU2 654 aa12.79□□□□□ -0.36
CPNE1-222ENST00000473373 HACE1Q8IYU2 909 aa12.79□□□□□ -0.36
CPNE1-222ENST00000473373 COLGALT1Q8NBJ5 622 aa12.79□□□□□ -0.36
CPNE1-222ENST00000473373 TMEM87AQ8NBN3 555 aa12.79□□□□□ -0.36
CPNE1-222ENST00000473373 URGCPQ8TCY9 931 aa12.79□□□□□ -0.36
CPNE1-222ENST00000473373 P2RX5Q93086 422 aa12.79□□□□□ -0.36
CPNE1-222ENST00000473373 ZNF558Q96NG5 402 aa12.79□□□□□ -0.36
CPNE1-222ENST00000473373 FAM193BQ96PV7 902 aaPredicted RBP12.79□□□□□ -0.36
CPNE1-222ENST00000473373 GBP3Q9H0R5 595 aa12.79□□□□□ -0.36
CPNE1-222ENST00000473373 RC3H2Q9HBD1 1191 aaKnown RBP12.79□□□□□ -0.36
CPNE1-222ENST00000473373 C11orf16Q9NQ32 467 aa12.79□□□□□ -0.36
CPNE1-222ENST00000473373 AGPAT5Q9NUQ2 364 aa12.79□□□□□ -0.36
CPNE1-222ENST00000473373 FAM105AQ9NUU6 356 aa12.79□□□□□ -0.36
CPNE1-222ENST00000473373 CLDND1Q9NY35 253 aa12.79□□□□□ -0.36
CPNE1-222ENST00000473373 PUF60Q9UHX1 559 aaKnown RBP12.79□□□□□ -0.36
CPNE1-222ENST00000473373 KIAA1024Q9UPX6 916 aa12.79□□□□□ -0.36
CPNE1-222ENST00000473373 BRWD1Q9NSI6 2320 aa12.78□□□□□ -0.36
CPNE1-222ENST00000473373 ZC3H11AO75152 810 aaKnown RBP eCLIP12.78□□□□□ -0.36
CPNE1-222ENST00000473373 SSBP05455 408 aaKnown RBP eCLIP12.78□□□□□ -0.36
CPNE1-222ENST00000473373 ITGB1P05556 798 aa12.78□□□□□ -0.36
CPNE1-222ENST00000473373 KCNA5P22460 613 aa12.78□□□□□ -0.36
CPNE1-222ENST00000473373 KRT17Q04695 432 aa12.78□□□□□ -0.36
CPNE1-222ENST00000473373 BMS1Q14692 1282 aaKnown RBP12.78□□□□□ -0.36
CPNE1-222ENST00000473373 TCEAL5Q5H9L2 206 aa12.78□□□□□ -0.36
CPNE1-222ENST00000473373 NOTUMQ6P988 496 aa12.78□□□□□ -0.36
CPNE1-222ENST00000473373 PADI6Q6TGC4 694 aa12.78□□□□□ -0.36
CPNE1-222ENST00000473373 HSCBQ8IWL3 235 aa12.78□□□□□ -0.36
CPNE1-222ENST00000473373 POF1BQ8WVV4 589 aa12.78□□□□□ -0.36
CPNE1-222ENST00000473373 LPPQ93052 612 aa12.78□□□□□ -0.36
CPNE1-222ENST00000473373 CPB2Q96IY4 423 aa12.78□□□□□ -0.36
CPNE1-222ENST00000473373 IFT74Q96LB3 600 aa12.78□□□□□ -0.36
CPNE1-222ENST00000473373 APOL6Q9BWW8 343 aa12.78□□□□□ -0.36
CPNE1-222ENST00000473373 UBE2ZQ9H832 354 aaPredicted RBP12.78□□□□□ -0.36
CPNE1-222ENST00000473373 IFT122Q9HBG6 1241 aa12.78□□□□□ -0.36
CPNE1-222ENST00000473373 ENTPD7Q9NQZ7 604 aa12.78□□□□□ -0.36
CPNE1-222ENST00000473373 DDX19AQ9NUU7 478 aaKnown RBP12.78□□□□□ -0.36
CPNE1-222ENST00000473373 DBR1Q9UK59 544 aaKnown RBP12.78□□□□□ -0.36
CPNE1-222ENST00000473373 PLAGL2Q9UPG8 496 aa12.78□□□□□ -0.36
CPNE1-222ENST00000473373 NCOR1O75376 2440 aa12.78□□□□□ -0.36
CPNE1-222ENST00000473373 VWA3AA6NCI4 1184 aa12.77□□□□□ -0.37
CPNE1-222ENST00000473373 GPR37L1O60883 481 aa12.77□□□□□ -0.37
CPNE1-222ENST00000473373 FGF18O76093 207 aa12.77□□□□□ -0.37
CPNE1-222ENST00000473373 SPATA31C1P0DKV0 1188 aa12.77□□□□□ -0.37
CPNE1-222ENST00000473373 MUTP22033 750 aa12.77□□□□□ -0.37
CPNE1-222ENST00000473373 PPM1AP35813 382 aa12.77□□□□□ -0.37
CPNE1-222ENST00000473373 ALDH7A1P49419 539 aaKnown RBP12.77□□□□□ -0.37
CPNE1-222ENST00000473373 TOB1P50616 345 aaPredicted RBP12.77□□□□□ -0.37
CPNE1-222ENST00000473373 FAM189BP81408 668 aa12.77□□□□□ -0.37
CPNE1-222ENST00000473373 CAPSQ13938 189 aa12.77□□□□□ -0.37
CPNE1-222ENST00000473373 PDIA5Q14554 519 aa12.77□□□□□ -0.37
CPNE1-222ENST00000473373 PPP2R5AQ15172 486 aa12.77□□□□□ -0.37
CPNE1-222ENST00000473373 BRAPQ7Z569 592 aa12.77□□□□□ -0.37
CPNE1-222ENST00000473373 DEPTORQ8TB45 409 aa12.77□□□□□ -0.37
CPNE1-222ENST00000473373 ASAP3Q8TDY4 903 aa12.77□□□□□ -0.37
CPNE1-222ENST00000473373 CASD1Q96PB1 797 aa12.77□□□□□ -0.37
CPNE1-222ENST00000473373 BHMT2Q9H2M3 363 aa12.77□□□□□ -0.37
CPNE1-222ENST00000473373 GPRC5CQ9NQ84 441 aa12.77□□□□□ -0.37
CPNE1-222ENST00000473373 XPNPEP1Q9NQW7 623 aa12.77□□□□□ -0.37
CPNE1-222ENST00000473373 TLR9Q9NR96 1032 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms