RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 ATP4AP20648 1035 aa7.81□□□□□ -1.16
CKS1B-205ENST00000473344 CLK2P49760 499 aaKnown RBP7.81□□□□□ -1.16
CKS1B-205ENST00000473344 METAP2P50579 478 aaKnown RBP eCLIP7.81□□□□□ -1.16
CKS1B-205ENST00000473344 GIT2Q14161 759 aa7.81□□□□□ -1.16
CKS1B-205ENST00000473344 DSC3Q14574 896 aa7.81□□□□□ -1.16
CKS1B-205ENST00000473344 NECTIN1Q15223 517 aa7.81□□□□□ -1.16
CKS1B-205ENST00000473344 PRR16Q569H4 304 aa7.81□□□□□ -1.16
CKS1B-205ENST00000473344 ATAT1Q5SQI0 421 aa7.81□□□□□ -1.16
CKS1B-205ENST00000473344 ECHDC2Q86YB7 292 aa7.81□□□□□ -1.16
CKS1B-205ENST00000473344 LRRC71Q8N4P6 559 aa7.81□□□□□ -1.16
CKS1B-205ENST00000473344 TDRD5Q8NAT2 981 aaKnown RBP7.81□□□□□ -1.16
CKS1B-205ENST00000473344 MTRQ99707 1265 aa7.81□□□□□ -1.16
CKS1B-205ENST00000473344 ESYT1Q9BSJ8 1104 aa7.81□□□□□ -1.16
CKS1B-205ENST00000473344 PRKD2Q9BZL6 878 aa7.81□□□□□ -1.16
CKS1B-205ENST00000473344 POMKQ9H5K3 350 aa7.81□□□□□ -1.16
CKS1B-205ENST00000473344 C6orf50Q9HD87 102 aa7.81□□□□□ -1.16
CKS1B-205ENST00000473344 DACT1Q9NYF0 836 aa7.81□□□□□ -1.16
CKS1B-205ENST00000473344 PLXNA4Q9HCM2 1894 aa7.81□□□□□ -1.16
CKS1B-205ENST00000473344 KIAA1671Q9BY89 1806 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 BAZ2BQ9UIF8 2168 aaKnown RBP7.8□□□□□ -1.16
CKS1B-205ENST00000473344 KAT6AQ92794 2004 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 IGLV3-22A0A075B6J6 115 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 KLF18A0A0U1RQI7 1052 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 CCDC196A0A1B0GTZ2 297 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 CARNS1A5YM72 827 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 C2orf71A6NGG8 1288 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 WDR64B1ANS9 1081 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 C2CD4DB7Z1M9 353 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 NT5C1B-RDH14C9J2C7 533 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 ZC3H11AO75152 810 aaKnown RBP eCLIP7.8□□□□□ -1.16
CKS1B-205ENST00000473344 BRD1O95696 1058 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 OATP04181 439 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 CYP3A4P08684 503 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 GNA11P29992 359 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 GPC3P51654 580 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 BCAR1P56945 870 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 IRX6P78412 446 aaPredicted RBP7.8□□□□□ -1.16
CKS1B-205ENST00000473344 CDC42EP1Q00587 391 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 FOXK2Q01167 660 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 AKAP17AQ02040 695 aaKnown RBP7.8□□□□□ -1.16
CKS1B-205ENST00000473344 RNASELQ05823 741 aaKnown RBP7.8□□□□□ -1.16
CKS1B-205ENST00000473344 TBC1D8BQ0IIM8 1120 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 COL9A3Q14050 684 aaPredicted RBP7.8□□□□□ -1.16
CKS1B-205ENST00000473344 PFKFB3Q16875 520 aaPredicted RBP7.8□□□□□ -1.16
CKS1B-205ENST00000473344 RARS2Q5T160 578 aaKnown RBP7.8□□□□□ -1.16
CKS1B-205ENST00000473344 DHX32Q7L7V1 743 aaKnown RBP7.8□□□□□ -1.16
CKS1B-205ENST00000473344 CABP7Q86V35 215 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 VPS52Q8N1B4 723 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 REXO1Q8N1G1 1221 aaKnown RBP7.8□□□□□ -1.16
CKS1B-205ENST00000473344 SLC39A11Q8N1S5 342 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 HELQQ8TDG4 1101 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 RSPH1Q8WYR4 309 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 ACSF2Q96CM8 615 aaPredicted RBP7.8□□□□□ -1.16
CKS1B-205ENST00000473344 ZNF668Q96K58 619 aaPredicted RBP7.8□□□□□ -1.16
CKS1B-205ENST00000473344 TCEANC2Q96MN5 208 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 PRR14Q9BWN1 585 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 BACH2Q9BYV9 841 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.8□□□□□ -1.16
CKS1B-205ENST00000473344 DZANK1Q9NVP4 752 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 CDH22Q9UJ99 828 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 BRPF3Q9ULD4 1205 aa7.8□□□□□ -1.16
CKS1B-205ENST00000473344 PROB1E7EW31 1015 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 CHMP2AO43633 222 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 CLASP2O75122 1294 aaKnown RBP7.79□□□□□ -1.16
CKS1B-205ENST00000473344 ASGR2P07307 311 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 HMGB1P09429 215 aaKnown RBP7.79□□□□□ -1.16
CKS1B-205ENST00000473344 WEE2P0C1S8 567 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 SKIP12755 728 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 DARSP14868 501 aaKnown RBP7.79□□□□□ -1.16
CKS1B-205ENST00000473344 FGFR4P22455 802 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 SFPQP23246 707 aaKnown RBP eCLIP7.79□□□□□ -1.16
CKS1B-205ENST00000473344 SFNP31947 248 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 DNM2P50570 870 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 PRKCEQ02156 737 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 FUT2Q10981 343 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 KRT32Q14532 448 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 NFKBIBQ15653 356 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 CLLU1OSQ5K130 101 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 TWF2Q6IBS0 349 aaKnown RBP7.79□□□□□ -1.16
CKS1B-205ENST00000473344 KIAA1841Q6NSI8 718 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 GLB1LQ6UWU2 654 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 ASCL5Q7RTU5 278 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 MTERF4Q7Z6M4 381 aaKnown RBP7.79□□□□□ -1.16
CKS1B-205ENST00000473344 PPFIBP1Q86W92 1011 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 ZDHHC14Q8IZN3 488 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 C12orf76Q8N812 135 aaPredicted RBP7.79□□□□□ -1.16
CKS1B-205ENST00000473344 TMEM105Q8N8V8 129 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 FLCNQ8NFG4 579 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 BICD2Q8TD16 824 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 NKD2Q969F2 451 aaPredicted RBP7.79□□□□□ -1.16
CKS1B-205ENST00000473344 GCOM2Q9BZD3 368 aaPredicted RBP7.79□□□□□ -1.16
CKS1B-205ENST00000473344 INO80BQ9C086 356 aaPredicted RBP7.79□□□□□ -1.16
CKS1B-205ENST00000473344 ZMYND12Q9H0C1 365 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 ADAMTS10Q9H324 1103 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 CHST12Q9NRB3 414 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 DISC1Q9NRI5 854 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 RNF19AQ9NV58 838 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 LIMD1Q9UGP4 676 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 USTQ9Y2C2 406 aa7.79□□□□□ -1.16
CKS1B-205ENST00000473344 FRYLO94915 3013 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms