RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 IGKV6-21A0A0C4DH24 114 aa12.59□□□□□ -0.39
ACTB-209ENST00000473257 M0R2N6 131 aa12.59□□□□□ -0.39
ACTB-209ENST00000473257 ZBTB39O15060 712 aa12.59□□□□□ -0.39
ACTB-209ENST00000473257 OFD1O75665 1012 aa12.59□□□□□ -0.39
ACTB-209ENST00000473257 EOMESO95936 686 aa12.59□□□□□ -0.39
ACTB-209ENST00000473257 GALTP07902 379 aa12.59□□□□□ -0.39
ACTB-209ENST00000473257 HOXB8P17481 243 aaPredicted RBP12.59□□□□□ -0.39
ACTB-209ENST00000473257 SFNP31947 248 aa12.59□□□□□ -0.39
ACTB-209ENST00000473257 SSRP1Q08945 709 aaKnown RBP12.59□□□□□ -0.39
ACTB-209ENST00000473257 Q4G0T1 1027 aa12.59□□□□□ -0.39
ACTB-209ENST00000473257 TPRNQ4KMQ1 711 aa12.59□□□□□ -0.39
ACTB-209ENST00000473257 NOMO2Q5JPE7 1267 aa12.59□□□□□ -0.39
ACTB-209ENST00000473257 CES5AQ6NT32 575 aa12.59□□□□□ -0.39
ACTB-209ENST00000473257 CATSPER4Q7RTX7 472 aa12.59□□□□□ -0.39
ACTB-209ENST00000473257 BLIDQ8IZY5 108 aa12.59□□□□□ -0.39
ACTB-209ENST00000473257 TMEM105Q8N8V8 129 aa12.59□□□□□ -0.39
ACTB-209ENST00000473257 SLC22A17Q8WUG5 538 aa12.59□□□□□ -0.39
ACTB-209ENST00000473257 ATOH1Q92858 354 aaPredicted RBP12.59□□□□□ -0.39
ACTB-209ENST00000473257 FRYLO94915 3013 aa12.59□□□□□ -0.39
ACTB-209ENST00000473257 FAM205CA6NFA0 338 aa12.58□□□□□ -0.4
ACTB-209ENST00000473257 F8W810 466 aa12.58□□□□□ -0.4
ACTB-209ENST00000473257 MAFO75444 373 aaPredicted RBP12.58□□□□□ -0.4
ACTB-209ENST00000473257 DDHD2O94830 711 aa12.58□□□□□ -0.4
ACTB-209ENST00000473257 SRGAP2CP0DJJ0 459 aa12.58□□□□□ -0.4
ACTB-209ENST00000473257 RNASELQ05823 741 aaKnown RBP12.58□□□□□ -0.4
ACTB-209ENST00000473257 LETM2Q2VYF4 491 aa12.58□□□□□ -0.4
ACTB-209ENST00000473257 GLB1LQ6UWU2 654 aa12.58□□□□□ -0.4
ACTB-209ENST00000473257 AGMOQ6ZNB7 445 aa12.58□□□□□ -0.4
ACTB-209ENST00000473257 TAS1R1Q7RTX1 841 aa12.58□□□□□ -0.4
ACTB-209ENST00000473257 OXER1Q8TDS5 423 aa12.58□□□□□ -0.4
ACTB-209ENST00000473257 IGSF21Q96ID5 467 aa12.58□□□□□ -0.4
ACTB-209ENST00000473257 RIPOR3Q96MK2 946 aa12.58□□□□□ -0.4
ACTB-209ENST00000473257 IFT122Q9HBG6 1241 aa12.58□□□□□ -0.4
ACTB-209ENST00000473257 FAM105AQ9NUU6 356 aa12.58□□□□□ -0.4
ACTB-209ENST00000473257 DACT1Q9NYF0 836 aa12.58□□□□□ -0.4
ACTB-209ENST00000473257 DDX25Q9UHL0 483 aaKnown RBP12.58□□□□□ -0.4
ACTB-209ENST00000473257 VAV3Q9UKW4 847 aa12.58□□□□□ -0.4
ACTB-209ENST00000473257 CYP3A7-CYP3A51PA0A087WV96 503 aa12.57□□□□□ -0.4
ACTB-209ENST00000473257 FSD2A1L4K1 749 aa12.57□□□□□ -0.4
ACTB-209ENST00000473257 C2CD2LO14523 706 aa12.57□□□□□ -0.4
ACTB-209ENST00000473257 GFRA3O60609 400 aa12.57□□□□□ -0.4
ACTB-209ENST00000473257 POMCP01189 267 aa12.57□□□□□ -0.4
ACTB-209ENST00000473257 CTSAP10619 480 aa12.57□□□□□ -0.4
ACTB-209ENST00000473257 SFPQP23246 707 aaKnown RBP eCLIP12.57□□□□□ -0.4
ACTB-209ENST00000473257 CYP3A7P24462 503 aa12.57□□□□□ -0.4
ACTB-209ENST00000473257 DNM2P50570 870 aa12.57□□□□□ -0.4
ACTB-209ENST00000473257 EVCP57679 992 aa12.57□□□□□ -0.4
ACTB-209ENST00000473257 PTPN14Q15678 1187 aa12.57□□□□□ -0.4
ACTB-209ENST00000473257 EARS2Q5JPH6 523 aaKnown RBP12.57□□□□□ -0.4
ACTB-209ENST00000473257 UBXN11Q5T124 520 aa12.57□□□□□ -0.4
ACTB-209ENST00000473257 RUFY3Q7L099 469 aa12.57□□□□□ -0.4
ACTB-209ENST00000473257 DDX53Q86TM3 631 aaKnown RBP12.57□□□□□ -0.4
ACTB-209ENST00000473257 TRIM22Q8IYM9 498 aa12.57□□□□□ -0.4
ACTB-209ENST00000473257 FBXL16Q8N461 479 aa12.57□□□□□ -0.4
ACTB-209ENST00000473257 TMEM87AQ8NBN3 555 aa12.57□□□□□ -0.4
ACTB-209ENST00000473257 ST13P5Q8NFI4 369 aaPredicted RBP12.57□□□□□ -0.4
ACTB-209ENST00000473257 PRPF31Q8WWY3 499 aaKnown RBP12.57□□□□□ -0.4
ACTB-209ENST00000473257 MBOAT7Q96N66 472 aa12.57□□□□□ -0.4
ACTB-209ENST00000473257 MRPL9Q9BYD2 267 aaKnown RBP12.57□□□□□ -0.4
ACTB-209ENST00000473257 SLKQ9H2G2 1235 aaPredicted RBP12.57□□□□□ -0.4
ACTB-209ENST00000473257 SH3GLB2Q9NR46 395 aa12.57□□□□□ -0.4
ACTB-209ENST00000473257 CYP26B1Q9NR63 512 aa12.57□□□□□ -0.4
ACTB-209ENST00000473257 RGL1Q9NZL6 768 aa12.57□□□□□ -0.4
ACTB-209ENST00000473257 DBR1Q9UK59 544 aaKnown RBP12.57□□□□□ -0.4
ACTB-209ENST00000473257 NR2E1Q9Y466 385 aa12.57□□□□□ -0.4
ACTB-209ENST00000473257 PCDHB2Q9Y5E7 798 aa12.57□□□□□ -0.4
ACTB-209ENST00000473257 FAM186AA6NE01 2351 aa12.56□□□□□ -0.4
ACTB-209ENST00000473257 GVINP1Q7Z2Y8 2422 aa12.56□□□□□ -0.4
ACTB-209ENST00000473257 A0A087WWV3 80 aa12.56□□□□□ -0.4
ACTB-209ENST00000473257 CPLX1O14810 134 aa12.56□□□□□ -0.4
ACTB-209ENST00000473257 CNPP09543 421 aaKnown RBP12.56□□□□□ -0.4
ACTB-209ENST00000473257 HOXA11P31270 313 aaPredicted RBP12.56□□□□□ -0.4
ACTB-209ENST00000473257 MTHFRP42898 656 aa12.56□□□□□ -0.4
ACTB-209ENST00000473257 PSMC5P62195 406 aa12.56□□□□□ -0.4
ACTB-209ENST00000473257 ITIH3Q06033 890 aa12.56□□□□□ -0.4
ACTB-209ENST00000473257 MTMR3Q13615 1198 aa12.56□□□□□ -0.4
ACTB-209ENST00000473257 NONOQ15233 471 aaKnown RBP eCLIP12.56□□□□□ -0.43e-11■■■■■ 39.9
ACTB-209ENST00000473257 CABP7Q86V35 215 aa12.56□□□□□ -0.4
ACTB-209ENST00000473257 TDRD5Q8NAT2 981 aaKnown RBP12.56□□□□□ -0.4
ACTB-209ENST00000473257 RDM1Q8NG50 284 aa12.56□□□□□ -0.4
ACTB-209ENST00000473257 RABGGTAQ92696 567 aa12.56□□□□□ -0.4
ACTB-209ENST00000473257 CEP170P1Q96L14 293 aa12.56□□□□□ -0.4
ACTB-209ENST00000473257 RNF39Q9H2S5 420 aa12.56□□□□□ -0.4
ACTB-209ENST00000473257 ZSWIM6Q9HCJ5 1215 aa12.56□□□□□ -0.4
ACTB-209ENST00000473257 CHST12Q9NRB3 414 aa12.56□□□□□ -0.4
ACTB-209ENST00000473257 SORCS3Q9UPU3 1222 aa12.56□□□□□ -0.4
ACTB-209ENST00000473257 PRG3Q9Y2Y8 225 aaPredicted RBP12.56□□□□□ -0.4
ACTB-209ENST00000473257 HES2Q9Y543 173 aa12.56□□□□□ -0.4
ACTB-209ENST00000473257 COL4A3BPQ9Y5P4 624 aa12.56□□□□□ -0.4
ACTB-209ENST00000473257 PLXNA3P51805 1871 aa12.56□□□□□ -0.4
ACTB-209ENST00000473257 DEXIO95424 95 aa12.55□□□□□ -0.4
ACTB-209ENST00000473257 SPATA31D3P0C874 917 aa12.55□□□□□ -0.4
ACTB-209ENST00000473257 PSMA5P28066 241 aa12.55□□□□□ -0.4
ACTB-209ENST00000473257 CYP4A11Q02928 519 aa12.55□□□□□ -0.4
ACTB-209ENST00000473257 LAMTOR4Q0VGL1 99 aa12.55□□□□□ -0.4
ACTB-209ENST00000473257 CTTNQ14247 550 aaKnown RBP12.55□□□□□ -0.4
ACTB-209ENST00000473257 ATAT1Q5SQI0 421 aa12.55□□□□□ -0.4
ACTB-209ENST00000473257 NCAPH2Q6IBW4 605 aa12.55□□□□□ -0.4
ACTB-209ENST00000473257 KIAA1841Q6NSI8 718 aa12.55□□□□□ -0.4
ACTB-209ENST00000473257 FAM43BQ6ZT52 329 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms