RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 HELQQ8TDG4 1101 aa17.32■□□□□ 0.36
MRPL55-226ENST00000473066 PGBD4Q96DM1 585 aa17.32■□□□□ 0.36
MRPL55-226ENST00000473066 ZNF558Q96NG5 402 aa17.32■□□□□ 0.36
MRPL55-226ENST00000473066 TRAIPQ9BWF2 469 aa17.32■□□□□ 0.36
MRPL55-226ENST00000473066 TYW1Q9NV66 732 aaKnown RBP17.32■□□□□ 0.36
MRPL55-226ENST00000473066 CUL9Q8IWT3 2517 aa17.31■□□□□ 0.36
MRPL55-226ENST00000473066 LRRIQ4A6NIV6 560 aa17.31■□□□□ 0.36
MRPL55-226ENST00000473066 NCK2O43639 380 aa17.31■□□□□ 0.36
MRPL55-226ENST00000473066 PDCP20941 246 aa17.31■□□□□ 0.36
MRPL55-226ENST00000473066 TOB1P50616 345 aaPredicted RBP17.31■□□□□ 0.36
MRPL55-226ENST00000473066 PTENP60484 403 aa17.31■□□□□ 0.36
MRPL55-226ENST00000473066 UBE3AQ05086 875 aa17.31■□□□□ 0.36
MRPL55-226ENST00000473066 CAPSQ13938 189 aa17.31■□□□□ 0.36
MRPL55-226ENST00000473066 CLLU1OSQ5K130 101 aa17.31■□□□□ 0.36
MRPL55-226ENST00000473066 KRT79Q5XKE5 535 aa17.31■□□□□ 0.36
MRPL55-226ENST00000473066 DTHD1Q6ZMT9 781 aa17.31■□□□□ 0.36
MRPL55-226ENST00000473066 MAEAQ7L5Y9 396 aa17.31■□□□□ 0.36
MRPL55-226ENST00000473066 ZNF598Q86UK7 904 aaKnown RBP17.31■□□□□ 0.36
MRPL55-226ENST00000473066 ZBTB8OSQ8IWT0 167 aa17.31■□□□□ 0.36
MRPL55-226ENST00000473066 ASAP3Q8TDY4 903 aa17.31■□□□□ 0.36
MRPL55-226ENST00000473066 ADAMTS19Q8TE59 1207 aa17.31■□□□□ 0.36
MRPL55-226ENST00000473066 POF1BQ8WVV4 589 aa17.31■□□□□ 0.36
MRPL55-226ENST00000473066 CASD1Q96PB1 797 aa17.31■□□□□ 0.36
MRPL55-226ENST00000473066 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.31■□□□□ 0.36
MRPL55-226ENST00000473066 RNF19AQ9NV58 838 aa17.31■□□□□ 0.36
MRPL55-226ENST00000473066 UNC80Q8N2C7 3258 aa17.31■□□□□ 0.36
MRPL55-226ENST00000473066 A0A087WWV3 80 aa17.3■□□□□ 0.36
MRPL55-226ENST00000473066 CARNS1A5YM72 827 aa17.3■□□□□ 0.36
MRPL55-226ENST00000473066 ATF7P17544 494 aaPredicted RBP17.3■□□□□ 0.36
MRPL55-226ENST00000473066 KCNA5P22460 613 aa17.3■□□□□ 0.36
MRPL55-226ENST00000473066 AXLP30530 894 aa17.3■□□□□ 0.36
MRPL55-226ENST00000473066 KCNQ1P51787 676 aa17.3■□□□□ 0.36
MRPL55-226ENST00000473066 POU5F1BQ06416 359 aa17.3■□□□□ 0.36
MRPL55-226ENST00000473066 PDIA5Q14554 519 aa17.3■□□□□ 0.36
MRPL55-226ENST00000473066 NOTUMQ6P988 496 aa17.3■□□□□ 0.36
MRPL55-226ENST00000473066 PADI6Q6TGC4 694 aa17.3■□□□□ 0.36
MRPL55-226ENST00000473066 C4orf32Q8N8J7 132 aa17.3■□□□□ 0.36
MRPL55-226ENST00000473066 SPPL3Q8TCT6 385 aa17.3■□□□□ 0.36
MRPL55-226ENST00000473066 URGCPQ8TCY9 931 aa17.3■□□□□ 0.36
MRPL55-226ENST00000473066 CCDC51Q96ER9 411 aa17.3■□□□□ 0.36
MRPL55-226ENST00000473066 CWH43Q9H720 699 aa17.3■□□□□ 0.36
MRPL55-226ENST00000473066 MINDY3Q9H8M7 445 aa17.3■□□□□ 0.36
MRPL55-226ENST00000473066 CLDND1Q9NY35 253 aa17.3■□□□□ 0.36
MRPL55-226ENST00000473066 HCSTQ9UBK5 93 aa17.3■□□□□ 0.36
MRPL55-226ENST00000473066 PUF60Q9UHX1 559 aaKnown RBP17.3■□□□□ 0.36
MRPL55-226ENST00000473066 INPP5FQ9Y2H2 1132 aa17.3■□□□□ 0.36
MRPL55-226ENST00000473066 VPS37CA5D8V6 355 aaPredicted RBP17.29■□□□□ 0.36
MRPL55-226ENST00000473066 FGF18O76093 207 aa17.29■□□□□ 0.36
MRPL55-226ENST00000473066 GLRA2P23416 452 aa17.29■□□□□ 0.36
MRPL55-226ENST00000473066 ARL2P36404 184 aa17.29■□□□□ 0.36
MRPL55-226ENST00000473066 RNASELQ05823 741 aaKnown RBP17.29■□□□□ 0.36
MRPL55-226ENST00000473066 TMEM132AQ24JP5 1023 aa17.29■□□□□ 0.36
MRPL55-226ENST00000473066 KCNT2Q6UVM3 1135 aa17.29■□□□□ 0.36
MRPL55-226ENST00000473066 IFNLR1Q8IU57 520 aaPredicted RBP17.29■□□□□ 0.36
MRPL55-226ENST00000473066 HACE1Q8IYU2 909 aa17.29■□□□□ 0.36
MRPL55-226ENST00000473066 IGSF22Q8N9C0 903 aa17.29■□□□□ 0.36
MRPL55-226ENST00000473066 CNNM3Q8NE01 707 aa17.29■□□□□ 0.36
MRPL55-226ENST00000473066 MICAL1Q8TDZ2 1067 aa17.29■□□□□ 0.36
MRPL55-226ENST00000473066 LPPQ93052 612 aa17.29■□□□□ 0.36
MRPL55-226ENST00000473066 PABPC5Q96DU9 382 aaKnown RBP17.29■□□□□ 0.36
MRPL55-226ENST00000473066 UHRF1Q96T88 793 aaPredicted RBP17.29■□□□□ 0.36
MRPL55-226ENST00000473066 TRIM6Q9C030 488 aaPredicted RBP17.29■□□□□ 0.36
MRPL55-226ENST00000473066 TLR9Q9NR96 1032 aa17.29■□□□□ 0.36
MRPL55-226ENST00000473066 DDX19AQ9NUU7 478 aaKnown RBP17.29■□□□□ 0.36
MRPL55-226ENST00000473066 KIAA1024Q9UPX6 916 aa17.29■□□□□ 0.36
MRPL55-226ENST00000473066 PCDHB2Q9Y5E7 798 aa17.29■□□□□ 0.36
MRPL55-226ENST00000473066 CNTNAP2Q9UHC6 1331 aa17.28■□□□□ 0.36
MRPL55-226ENST00000473066 ZNF623O75123 536 aa17.28■□□□□ 0.36
MRPL55-226ENST00000473066 ATP2C1P98194 919 aaPredicted RBP17.28■□□□□ 0.36
MRPL55-226ENST00000473066 KRT17Q04695 432 aa17.28■□□□□ 0.36
MRPL55-226ENST00000473066 CUL4AQ13619 759 aa17.28■□□□□ 0.36
MRPL55-226ENST00000473066 PPP2R5AQ15172 486 aa17.28■□□□□ 0.36
MRPL55-226ENST00000473066 LONRF3Q496Y0 759 aa17.28■□□□□ 0.36
MRPL55-226ENST00000473066 BRAPQ7Z569 592 aa17.28■□□□□ 0.36
MRPL55-226ENST00000473066 CDK5RAP3Q96JB5 506 aa17.28■□□□□ 0.36
MRPL55-226ENST00000473066 NFKBIZQ9BYH8 718 aa17.28■□□□□ 0.36
MRPL55-226ENST00000473066 C2orf40Q9H1Z8 148 aa17.28■□□□□ 0.36
MRPL55-226ENST00000473066 BHMT2Q9H2M3 363 aa17.28■□□□□ 0.36
MRPL55-226ENST00000473066 GPRC5CQ9NQ84 441 aa17.28■□□□□ 0.36
MRPL55-226ENST00000473066 NCOR1O75376 2440 aa17.27■□□□□ 0.36
MRPL55-226ENST00000473066 FSD2A1L4K1 749 aa17.27■□□□□ 0.36
MRPL55-226ENST00000473066 TSPAN1O60635 241 aa17.27■□□□□ 0.36
MRPL55-226ENST00000473066 ZC3H11AO75152 810 aaKnown RBP eCLIP17.27■□□□□ 0.36
MRPL55-226ENST00000473066 BMP15O95972 392 aa17.27■□□□□ 0.36
MRPL55-226ENST00000473066 CYP11B2P19099 503 aa17.27■□□□□ 0.36
MRPL55-226ENST00000473066 ALDH7A1P49419 539 aaKnown RBP17.27■□□□□ 0.36
MRPL55-226ENST00000473066 MBTD1Q05BQ5 628 aa17.27■□□□□ 0.36
MRPL55-226ENST00000473066 ZRSR1Q15695 479 aaKnown RBP17.27■□□□□ 0.36
MRPL55-226ENST00000473066 NOMO2Q5JPE7 1267 aa17.27■□□□□ 0.36
MRPL55-226ENST00000473066 PDE12Q6L8Q7 609 aaKnown RBP17.27■□□□□ 0.36
MRPL55-226ENST00000473066 DEPTORQ8TB45 409 aa17.27■□□□□ 0.36
MRPL55-226ENST00000473066 MRPS27Q92552 414 aaKnown RBP17.27■□□□□ 0.36
MRPL55-226ENST00000473066 IFT74Q96LB3 600 aa17.27■□□□□ 0.36
MRPL55-226ENST00000473066 IGFLR1Q9H665 355 aa17.27■□□□□ 0.36
MRPL55-226ENST00000473066 RSAD1Q9HA92 442 aa17.27■□□□□ 0.36
MRPL55-226ENST00000473066 ENTPD7Q9NQZ7 604 aa17.27■□□□□ 0.36
MRPL55-226ENST00000473066 PRMT7Q9NVM4 692 aaPredicted RBP17.27■□□□□ 0.36
MRPL55-226ENST00000473066 SPG21Q9NZD8 308 aa17.27■□□□□ 0.36
MRPL55-226ENST00000473066 DNM3Q9UQ16 869 aa17.27■□□□□ 0.36
MRPL55-226ENST00000473066 FAM50BQ9Y247 325 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms