RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	BAG1	Q99933	345 aa	Predicted RBP	11.78	□□□□□ -0.52
MRPS18B-208	ENST00000472267	JPH2	Q9BR39	696 aa	Predicted RBP	11.78	□□□□□ -0.52
MRPS18B-208	ENST00000472267	C16orf70	Q9BSU1	422 aa		11.78	□□□□□ -0.52
MRPS18B-208	ENST00000472267	CRACR2A	Q9BSW2	395 aa		11.78	□□□□□ -0.52
MRPS18B-208	ENST00000472267	TUT1	Q9H6E5	874 aa	Known RBP	11.78	□□□□□ -0.52
MRPS18B-208	ENST00000472267	HSPBP1	Q9NZL4	362 aa		11.78	□□□□□ -0.52
MRPS18B-208	ENST00000472267	CGN	Q9P2M7	1197 aa	Known RBP	11.78	□□□□□ -0.52
MRPS18B-208	ENST00000472267	ARHGAP28	Q9P2N2	729 aa		11.78	□□□□□ -0.52
MRPS18B-208	ENST00000472267	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.78	□□□□□ -0.52
MRPS18B-208	ENST00000472267	TTC26	A0AVF1	554 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	GOLGA8IP	A6NC78	632 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	GOLGA8J	A6NMD2	632 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267		K7ERI5	159 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	GAS2	O43903	313 aa	Known RBP	11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	TRPA1	O75762	1119 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	AFP	P02771	609 aa	Known RBP	11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	SRGAP2C	P0DJJ0	459 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	KRT9	P35527	623 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	FLT3LG	P49771	235 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	CLCN3	P51790	818 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	IRX5	P78411	483 aa	Predicted RBP	11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	LAMTOR4	Q0VGL1	99 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	MKRN4P	Q13434	485 aa	Predicted RBP	11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	MYBPC2	Q14324	1141 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	KIF22	Q14807	665 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	EFCAB12	Q6NXP0	572 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	TAS1R3	Q7RTX0	852 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	XXYLT1	Q8NBI6	393 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	PSPC1	Q8WXF1	523 aa	Known RBP	11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	ZNF668	Q96K58	619 aa	Predicted RBP	11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	PANX2	Q96RD6	677 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	MKNK1	Q9BUB5	465 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	NUP58	Q9BVL2	599 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	LSM14B	Q9BX40	385 aa	Known RBP	11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	AP5M1	Q9H0R1	490 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	TMX1	Q9H3N1	280 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	FAM207A	Q9NSI2	230 aa	Predicted RBP	11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	GNE	Q9Y223	722 aa	Known RBP	11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	SIK3	Q9Y2K2	1263 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	USP20	Q9Y2K6	914 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	LUC7L2	Q9Y383	392 aa	Known RBP	11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	KAT6A	Q92794	2004 aa		11.77	□□□□□ -0.53
MRPS18B-208	ENST00000472267	HNRNPDL	O14979	420 aa	Known RBP	11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	ZNF500	O60304	480 aa	Predicted RBP	11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	KRT13	P13646	458 aa		11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	KLRC1	P26715	233 aa		11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	CNGA1	P29973	690 aa		11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	ABCD1	P33897	745 aa		11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	LIG4	P49917	911 aa		11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	SNRPF	P62306	86 aa	Known RBP	11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	HTRA3	P83110	453 aa		11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	SP3	Q02447	781 aa		11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	PRKCZ	Q05513	592 aa		11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	PPP2R3A	Q06190	1150 aa		11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	IRF5	Q13568	498 aa		11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.76	□□□□□ -0.53	8e-12	■■□□□ 14
MRPS18B-208	ENST00000472267	MFSD14C	Q5VZR4	134 aa		11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	RHPN2	Q8IUC4	686 aa		11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	C12orf56	Q8IXR9	622 aa		11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	RETREG2	Q8NC44	543 aa		11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	ZSWIM2	Q8NEG5	633 aa		11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	NEK11	Q8NG66	645 aa		11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	POMGNT1	Q8WZA1	660 aa		11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	SAAL1	Q96ER3	474 aa		11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	BORCS6	Q96GS4	357 aa		11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	CAPN11	Q9UMQ6	739 aa		11.76	□□□□□ -0.53
MRPS18B-208	ENST00000472267	IGKV6-21	A0A0C4DH24	114 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	ADCY3	O60266	1144 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	C22orf31	O95567	290 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	GJB1	P08034	283 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	MYL3	P08590	195 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	TRIM49	P0CI25	452 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	TRIM49C	P0CI26	452 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	HOXD8	P13378	290 aa	Predicted RBP	11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	ADSS	P30520	456 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	MATR3	P43243	847 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	BEX3	Q00994	111 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	KCNMA1	Q12791	1236 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	PPFIA1	Q13136	1202 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	MXD4	Q14582	209 aa	Predicted RBP	11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	TSR1	Q2NL82	804 aa	Known RBP	11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	SLC39A4	Q6P5W5	647 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	TMEM139	Q8IV31	216 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	RNF149	Q8NC42	400 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	TRPV1	Q8NER1	839 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	PPP1R13L	Q8WUF5	828 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	TRIB2	Q92519	343 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	SLC35C1	Q96A29	364 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	CCDC51	Q96ER9	411 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	NLRP4	Q96MN2	994 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	ABHD10	Q9NUJ1	306 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	AGPAT5	Q9NUQ2	364 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	RNF186	Q9NXI6	227 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	SI	P14410	1827 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267		A6NJR5	290 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	EPHB6	O15197	1021 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	MAGEB2	O15479	319 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	AKR1A1	P14550	325 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	VEGFB	P49765	207 aa		11.75	□□□□□ -0.53
MRPS18B-208	ENST00000472267	CAP1	Q01518	475 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms