RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 MIEF2Q96C03 454 aa4.59□□□□□ -1.67
COPS3-206ENST00000471414 FDXACB1Q9BRP7 624 aaPredicted RBP4.59□□□□□ -1.67
COPS3-206ENST00000471414 NOL10Q9BSC4 688 aaKnown RBP4.59□□□□□ -1.67
COPS3-206ENST00000471414 MSRAQ9UJ68 235 aa4.59□□□□□ -1.67
COPS3-206ENST00000471414 ING1Q9UK53 422 aaPredicted RBP4.59□□□□□ -1.67
COPS3-206ENST00000471414 GRXCR1A8MXD5 290 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 MAFGO15525 162 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 PEX11BO96011 259 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 BPIP17213 487 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 KPNA1P52294 538 aaPredicted RBP4.58□□□□□ -1.68
COPS3-206ENST00000471414 SPIDRQ14159 915 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 MAN2A1Q16706 1144 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 CCDC178Q5BJE1 867 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 Q6ZRM9 215 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 ESPNLQ6ZVH7 1005 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 USP51Q70EK9 711 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 NPM2Q86SE8 214 aaKnown RBP4.58□□□□□ -1.68
COPS3-206ENST00000471414 NOP9Q86U38 636 aaKnown RBP4.58□□□□□ -1.68
COPS3-206ENST00000471414 PASD1Q8IV76 773 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 CMTM4Q8IZR5 234 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 CDYL2Q8N8U2 506 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 PIK3C3Q8NEB9 887 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 HIST1H2AHQ96KK5 128 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 HIST1H2AJQ99878 128 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 WNT8AQ9H1J5 351 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 MS4A5Q9H3V2 200 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 EMC7Q9NPA0 242 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 SYNPO2Q9UMS6 1093 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 PCDHB6Q9Y5E3 794 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 HS3ST3A1Q9Y663 406 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 NUMBLQ9Y6R0 609 aa4.58□□□□□ -1.68
COPS3-206ENST00000471414 LCHNA4D1U4 455 aa4.57□□□□□ -1.68
COPS3-206ENST00000471414 FSBPO95073 299 aa4.57□□□□□ -1.68
COPS3-206ENST00000471414 ZNF202O95125 648 aa4.57□□□□□ -1.68
COPS3-206ENST00000471414 PCDH8O95206 1070 aa4.57□□□□□ -1.68
COPS3-206ENST00000471414 LY86O95711 162 aa4.57□□□□□ -1.68
COPS3-206ENST00000471414 LSP1P33241 339 aa4.57□□□□□ -1.68
COPS3-206ENST00000471414 GPR15P49685 360 aa4.57□□□□□ -1.68
COPS3-206ENST00000471414 MANFP55145 182 aaKnown RBP4.57□□□□□ -1.68
COPS3-206ENST00000471414 SLC25A3Q00325 362 aa4.57□□□□□ -1.68
COPS3-206ENST00000471414 OCRLQ01968 901 aa4.57□□□□□ -1.68
COPS3-206ENST00000471414 CD69Q07108 199 aa4.57□□□□□ -1.68
COPS3-206ENST00000471414 TUBA3CQ13748 450 aa4.57□□□□□ -1.68
COPS3-206ENST00000471414 TOB2Q14106 344 aaPredicted RBP4.57□□□□□ -1.68
COPS3-206ENST00000471414 LSM12Q3MHD2 195 aaKnown RBP4.57□□□□□ -1.68
COPS3-206ENST00000471414 FKBP15Q5T1M5 1219 aa4.57□□□□□ -1.68
COPS3-206ENST00000471414 TUBA3EQ6PEY2 450 aa4.57□□□□□ -1.68
COPS3-206ENST00000471414 RNF180Q86T96 592 aa4.57□□□□□ -1.68
COPS3-206ENST00000471414 CXorf67Q86X51 503 aaPredicted RBP4.57□□□□□ -1.68
COPS3-206ENST00000471414 OR2W6PQ8NHA6 318 aa4.57□□□□□ -1.68
COPS3-206ENST00000471414 ZNF512Q96ME7 567 aaPredicted RBP4.57□□□□□ -1.68
COPS3-206ENST00000471414 PLEKHG4BQ96PX9 1271 aa4.57□□□□□ -1.68
COPS3-206ENST00000471414 TCF25Q9BQ70 676 aa4.57□□□□□ -1.68
COPS3-206ENST00000471414 ZNF341Q9BYN7 854 aa4.57□□□□□ -1.68
COPS3-206ENST00000471414 MAPRE3Q9UPY8 281 aa4.57□□□□□ -1.68
COPS3-206ENST00000471414 PPP2R3BQ9Y5P8 575 aa4.57□□□□□ -1.68
COPS3-206ENST00000471414 A0A1W2PR48 441 aa4.56□□□□□ -1.68
COPS3-206ENST00000471414 PRSS38A1L453 326 aa4.56□□□□□ -1.68
COPS3-206ENST00000471414 DAPK3O43293 454 aa4.56□□□□□ -1.68
COPS3-206ENST00000471414 APOL3O95236 402 aa4.56□□□□□ -1.68
COPS3-206ENST00000471414 FKBP9O95302 570 aa4.56□□□□□ -1.68
COPS3-206ENST00000471414 SCNN1BP51168 640 aa4.56□□□□□ -1.68
COPS3-206ENST00000471414 ABHD18Q0P651 414 aa4.56□□□□□ -1.68
COPS3-206ENST00000471414 DHCR24Q15392 516 aa4.56□□□□□ -1.68
COPS3-206ENST00000471414 ELAVL1Q15717 326 aaKnown RBP4.56□□□□□ -1.68
COPS3-206ENST00000471414 MFSD5Q6N075 450 aa4.56□□□□□ -1.68
COPS3-206ENST00000471414 PCSK4Q6UW60 755 aa4.56□□□□□ -1.68
COPS3-206ENST00000471414 FKBP9P1Q75LS8 142 aa4.56□□□□□ -1.68
COPS3-206ENST00000471414 MDGA1Q8NFP4 955 aa4.56□□□□□ -1.68
COPS3-206ENST00000471414 GPR101Q96P66 508 aaPredicted RBP4.56□□□□□ -1.68
COPS3-206ENST00000471414 MRIQ9BWK5 157 aa4.56□□□□□ -1.68
COPS3-206ENST00000471414 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.56□□□□□ -1.68
COPS3-206ENST00000471414 XDHP47989 1333 aa4.55□□□□□ -1.68
COPS3-206ENST00000471414 PDE8AO60658 829 aa4.55□□□□□ -1.68
COPS3-206ENST00000471414 MAN2A2P49641 1150 aa4.55□□□□□ -1.68
COPS3-206ENST00000471414 HMGA2P52926 109 aa4.55□□□□□ -1.68
COPS3-206ENST00000471414 PURAQ00577 322 aaKnown RBP4.55□□□□□ -1.68
COPS3-206ENST00000471414 DCAF17Q5H9S7 520 aaPredicted RBP4.55□□□□□ -1.68
COPS3-206ENST00000471414 Q6ZPA2 131 aa4.55□□□□□ -1.68
COPS3-206ENST00000471414 FRMD7Q6ZUT3 714 aa4.55□□□□□ -1.68
COPS3-206ENST00000471414 TAS1R1Q7RTX1 841 aa4.55□□□□□ -1.68
COPS3-206ENST00000471414 APBB1IPQ7Z5R6 666 aaPredicted RBP4.55□□□□□ -1.68
COPS3-206ENST00000471414 THNSL2Q86YJ6 484 aa4.55□□□□□ -1.68
COPS3-206ENST00000471414 RSAD2Q8WXG1 361 aa4.55□□□□□ -1.68
COPS3-206ENST00000471414 PRDM12Q9H4Q4 367 aa4.55□□□□□ -1.68
COPS3-206ENST00000471414 PARPBPQ9NWS1 579 aa4.55□□□□□ -1.68
COPS3-206ENST00000471414 ING3Q9NXR8 418 aa4.55□□□□□ -1.68
COPS3-206ENST00000471414 TRPS1Q9UHF7 1281 aa4.55□□□□□ -1.68
COPS3-206ENST00000471414 PRSS50Q9UI38 385 aa4.55□□□□□ -1.68
COPS3-206ENST00000471414 ST20-MTHFSA0A0A6YYL1 179 aa4.54□□□□□ -1.68
COPS3-206ENST00000471414 GOLGA8BA8MQT2 603 aa4.54□□□□□ -1.68
COPS3-206ENST00000471414 STC2O76061 302 aa4.54□□□□□ -1.68
COPS3-206ENST00000471414 ALDH1A2O94788 518 aa4.54□□□□□ -1.68
COPS3-206ENST00000471414 CFBP00751 764 aa4.54□□□□□ -1.68
COPS3-206ENST00000471414 MCM7P33993 719 aa4.54□□□□□ -1.68
COPS3-206ENST00000471414 TRIM25Q14258 630 aaKnown RBP4.54□□□□□ -1.68
COPS3-206ENST00000471414 METTL24Q5JXM2 366 aa4.54□□□□□ -1.68
COPS3-206ENST00000471414 BROXQ5VW32 411 aa4.54□□□□□ -1.68
COPS3-206ENST00000471414 RHOUQ7L0Q8 258 aa4.54□□□□□ -1.68
COPS3-206ENST00000471414 RASSF3Q86WH2 238 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms