RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 KIF2CQ99661 725 aa15.05■□□□□ -0
HMGN1-211ENST00000471260 MTRQ99707 1265 aa15.05■□□□□ -0
HMGN1-211ENST00000471260 FAM105AQ9NUU6 356 aa15.05■□□□□ -0
HMGN1-211ENST00000471260 PIN4Q9Y237 131 aaKnown RBP15.05■□□□□ -0
HMGN1-211ENST00000471260 ATG2AQ2TAZ0 1938 aa15.05■□□□□ -0
HMGN1-211ENST00000471260 HSCBQ8IWL3 235 aa15.04■□□□□ -0
HMGN1-211ENST00000471260 GJD3Q8N144 294 aa15.04■□□□□ -0
HMGN1-211ENST00000471260 FAM184AQ8NB25 1140 aa15.04■□□□□ -0
HMGN1-211ENST00000471260 RNF169Q8NCN4 708 aa15.04■□□□□ -0
HMGN1-211ENST00000471260 TMEM143Q96AN5 459 aa15.04■□□□□ -0
HMGN1-211ENST00000471260 PGBD4Q96DM1 585 aa15.04■□□□□ -0
HMGN1-211ENST00000471260 IGFLR1Q9H665 355 aa15.04■□□□□ -0
HMGN1-211ENST00000471260 NGRNQ9NPE2 291 aaKnown RBP15.04■□□□□ -0
HMGN1-211ENST00000471260 AGPAT5Q9NUQ2 364 aa15.04■□□□□ -0
HMGN1-211ENST00000471260 SPG21Q9NZD8 308 aa15.04■□□□□ -0
HMGN1-211ENST00000471260 CIZ1Q9ULV3 898 aaPredicted RBP15.04■□□□□ -0
HMGN1-211ENST00000471260 FSCN2O14926 492 aa15.03■□□□□ -0
HMGN1-211ENST00000471260 TBX10O75333 385 aa15.03■□□□□ -0
HMGN1-211ENST00000471260 EYA4O95677 639 aa15.03■□□□□ -0
HMGN1-211ENST00000471260 SRGAP2CP0DJJ0 459 aa15.03■□□□□ -0
HMGN1-211ENST00000471260 AXLP30530 894 aa15.03■□□□□ -0
HMGN1-211ENST00000471260 TRAPPC10P48553 1259 aa15.03■□□□□ -0
HMGN1-211ENST00000471260 ALDH7A1P49419 539 aaKnown RBP15.03■□□□□ -0
HMGN1-211ENST00000471260 NDUFV1P49821 464 aa15.03■□□□□ -0
HMGN1-211ENST00000471260 FOSBP53539 338 aa15.03■□□□□ -0
HMGN1-211ENST00000471260 SMAD4Q13485 552 aaKnown RBP15.03■□□□□ -0
HMGN1-211ENST00000471260 SMAD2Q15796 467 aaKnown RBP15.03■□□□□ -0
HMGN1-211ENST00000471260 ADGRD2Q7Z7M1 963 aa15.03■□□□□ -0
HMGN1-211ENST00000471260 IFNLR1Q8IU57 520 aaPredicted RBP15.03■□□□□ -0
HMGN1-211ENST00000471260 RNF149Q8NC42 400 aa15.03■□□□□ -0
HMGN1-211ENST00000471260 HELQQ8TDG4 1101 aa15.03■□□□□ -0
HMGN1-211ENST00000471260 CCDC43Q96MW1 224 aaKnown RBP15.03■□□□□ -0
HMGN1-211ENST00000471260 TLE6Q9H808 572 aa15.03■□□□□ -0
HMGN1-211ENST00000471260 TUFT1Q9NNX1 390 aa15.03■□□□□ -0
HMGN1-211ENST00000471260 CD207Q9UJ71 328 aa15.03■□□□□ -0
HMGN1-211ENST00000471260 PLXNA4Q9HCM2 1894 aa15.03■□□□□ -0
HMGN1-211ENST00000471260 WNT7AO00755 349 aa15.02■□□□□ -0
HMGN1-211ENST00000471260 ZBTB39O15060 712 aa15.02■□□□□ -0
HMGN1-211ENST00000471260 MBTPS2O43462 519 aa15.02■□□□□ -0
HMGN1-211ENST00000471260 CSPG5O95196 566 aa15.02■□□□□ -0
HMGN1-211ENST00000471260 PTMSP20962 102 aa15.02■□□□□ -0
HMGN1-211ENST00000471260 MCM7P33993 719 aa15.02■□□□□ -0
HMGN1-211ENST00000471260 GTF2F1P35269 517 aaKnown RBP eCLIP15.02■□□□□ -0
HMGN1-211ENST00000471260 NRIP1P48552 1158 aa15.02■□□□□ -0
HMGN1-211ENST00000471260 RARRES1P49788 294 aa15.02■□□□□ -0
HMGN1-211ENST00000471260 ERVFC1P60507 584 aa15.02■□□□□ -0
HMGN1-211ENST00000471260 GUCY1B3Q02153 619 aa15.02■□□□□ -0
HMGN1-211ENST00000471260 DLX2Q07687 328 aaPredicted RBP15.02■□□□□ -0
HMGN1-211ENST00000471260 NCBP1Q09161 790 aaKnown RBP15.02■□□□□ -0
HMGN1-211ENST00000471260 COASYQ13057 564 aa15.02■□□□□ -0
HMGN1-211ENST00000471260 TFDP1Q14186 410 aa15.02■□□□□ -0
HMGN1-211ENST00000471260 BMS1Q14692 1282 aaKnown RBP15.02■□□□□ -0
HMGN1-211ENST00000471260 RABEP1Q15276 862 aa15.02■□□□□ -0
HMGN1-211ENST00000471260 GLB1LQ6UWU2 654 aa15.02■□□□□ -0
HMGN1-211ENST00000471260 MRPL10Q7Z7H8 261 aaKnown RBP15.02■□□□□ -0
HMGN1-211ENST00000471260 ADHFE1Q8IWW8 467 aa15.02■□□□□ -0
HMGN1-211ENST00000471260 SLC39A11Q8N1S5 342 aa15.02■□□□□ -0
HMGN1-211ENST00000471260 CNNM3Q8NE01 707 aa15.02■□□□□ -0
HMGN1-211ENST00000471260 MSLNLQ96KJ4 702 aa15.02■□□□□ -0
HMGN1-211ENST00000471260 POP1Q99575 1024 aaKnown RBP15.02■□□□□ -0
HMGN1-211ENST00000471260 NFKBIZQ9BYH8 718 aa15.02■□□□□ -0
HMGN1-211ENST00000471260 TMEM60Q9H2L4 133 aa15.02■□□□□ -0
HMGN1-211ENST00000471260 CHMP5Q9NZZ3 219 aa15.02■□□□□ -0
HMGN1-211ENST00000471260 HCSTQ9UBK5 93 aa15.02■□□□□ -0
HMGN1-211ENST00000471260 CNTNAP2Q9UHC6 1331 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 PI4K2BG5E9Z4 385 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 LINC01565O15544 149 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 ERLIN2O94905 339 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 SRGAP2BP0DMP2 458 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 MUTP22033 750 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 HOXA11P31270 313 aaPredicted RBP15.01□□□□□ -0.01
HMGN1-211ENST00000471260 PTENP60484 403 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 GNL2Q13823 731 aaKnown RBP15.01□□□□□ -0.01
HMGN1-211ENST00000471260 DUSP6Q16828 381 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 TMEM184AQ6ZMB5 413 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 RBM23Q86U06 439 aaKnown RBP15.01□□□□□ -0.01
HMGN1-211ENST00000471260 NOSTRINQ8IVI9 506 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 SMRP1Q8NCR6 262 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 ERMNQ8TAM6 284 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 CCDC51Q96ER9 411 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 TCF25Q9BQ70 676 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 POLR3CQ9BUI4 534 aaPredicted RBP15.01□□□□□ -0.01
HMGN1-211ENST00000471260 MINDY3Q9H8M7 445 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 CD320Q9NPF0 282 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 UBN1Q9NPG3 1134 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 XPNPEP1Q9NQW7 623 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 CLEC1BQ9P126 229 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 KANSL3Q9P2N6 904 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 STK39Q9UEW8 545 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 KIF3AQ9Y496 699 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 PCDHB2Q9Y5E7 798 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 BDP1A6H8Y1 2624 aa15.01□□□□□ -0.01
HMGN1-211ENST00000471260 POTEMA6NI47 508 aa15□□□□□ -0.01
HMGN1-211ENST00000471260 C19orf67A6NJJ6 358 aa15□□□□□ -0.01
HMGN1-211ENST00000471260 ST18O60284 1047 aa15□□□□□ -0.01
HMGN1-211ENST00000471260 OFD1O75665 1012 aa15□□□□□ -0.01
HMGN1-211ENST00000471260 OR52Z1P0C646 297 aa15□□□□□ -0.01
HMGN1-211ENST00000471260 SPATA31C1P0DKV0 1188 aa15□□□□□ -0.01
HMGN1-211ENST00000471260 ALADP13716 330 aa15□□□□□ -0.01
HMGN1-211ENST00000471260 ATP2B1P20020 1258 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms